RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 KCNF1Q9H3M0 494 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
ABCB1-210ENST00000543898 MRVI1Q9Y6F6 885 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
ABCB1-210ENST00000543898 C1orf141Q5JVX7 400 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 TTLL5Q6EMB2 1281 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 SYT10Q6XYQ8 523 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
ABCB1-210ENST00000543898 NEMFO60524 1076 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 NR1I2O75469 434 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 NBPF7P0C2Y1 421 aaPredicted RBP10.04□□□□□ -0.8
ABCB1-210ENST00000543898 NMIQ13287 307 aaPredicted RBP10.04□□□□□ -0.8
ABCB1-210ENST00000543898 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 SPTLC3Q9NUV7 552 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 PIK3R4Q99570 1358 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 CFAP74Q9C0B2 1584 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 HYPKQ9NX55 129 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.03□□□□□ -0.8
ABCB1-210ENST00000543898 ABCA6Q8N139 1617 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 LEO1Q8WVC0 666 aaPredicted RBP10.03□□□□□ -0.8
ABCB1-210ENST00000543898 DNAI1Q9UI46 699 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 FAM135BQ49AJ0 1406 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 CFAP100Q494V2 611 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 CEP152O94986 1710 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 DDX58O95786 925 aaKnown RBP10.03□□□□□ -0.8
ABCB1-210ENST00000543898 GABPB1Q06547 395 aaPredicted RBP10.03□□□□□ -0.8
ABCB1-210ENST00000543898 ABTB2Q8N961 1025 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 CHPF2Q9P2E5 772 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 TPCN1Q9ULQ1 816 aa10.03□□□□□ -0.8
ABCB1-210ENST00000543898 ACEP12821 1306 aa10.02□□□□□ -0.8
ABCB1-210ENST00000543898 RNF17Q9BXT8 1623 aaKnown RBP10.02□□□□□ -0.8
ABCB1-210ENST00000543898 KIF2AO00139 706 aaPredicted RBP10.02□□□□□ -0.81
ABCB1-210ENST00000543898 ZBTB22O15209 634 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 ARHGAP29Q52LW3 1261 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 CNKSR2Q8WXI2 1034 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 SLC26A8Q96RN1 970 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 PSMD1Q99460 953 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 IL25Q9H293 177 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 JAK2O60674 1132 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 CLSTN2Q9H4D0 955 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 POLR3DP05423 398 aaPredicted RBP10.02□□□□□ -0.81
ABCB1-210ENST00000543898 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
ABCB1-210ENST00000543898 ZSWIM4Q9H7M6 989 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 FBXO3Q9UK99 471 aa10.02□□□□□ -0.81
ABCB1-210ENST00000543898 MYL6BP14649 208 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 HSP90AA4PQ58FG1 418 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 KRT32Q14532 448 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 SPHKAPQ2M3C7 1700 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 NEK1Q96PY6 1258 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 TTC21BQ7Z4L5 1316 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 BTBD11A6QL63 1104 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 CTAGE5O15320 804 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 ERCC6LQ2NKX8 1250 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 RAB11FIP4Q86YS3 637 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 STAP2Q9UGK3 403 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 HMGB1P09429 215 aaKnown RBP10.01□□□□□ -0.81
ABCB1-210ENST00000543898 ATP2B1P20020 1258 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 GSDMDP57764 484 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 Q6ZUG5 572 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 ERO1AQ96HE7 468 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 MAP3K2Q9Y2U5 619 aa10.01□□□□□ -0.81
ABCB1-210ENST00000543898 KIF1BO60333 1816 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 MED14O60244 1454 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 AP5Z1O43299 807 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
ABCB1-210ENST00000543898 TMEM87AQ8NBN3 555 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 EYA1Q99502 592 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 CAVIN2O95810 425 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 TOMM22Q9NS69 142 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 IFNKQ9P0W0 207 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 ZNF530Q6P9A1 599 aaPredicted RBP10□□□□□ -0.81
ABCB1-210ENST00000543898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10□□□□□ -0.81
ABCB1-210ENST00000543898 LRRC8AQ8IWT6 810 aa10□□□□□ -0.81
ABCB1-210ENST00000543898 SLC27A2O14975 620 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 CWF19L2Q2TBE0 894 aaKnown RBP9.99□□□□□ -0.81
ABCB1-210ENST00000543898 MPRIPQ6WCQ1 1025 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 MAP3K19Q56UN5 1328 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 PES1O00541 588 aaKnown RBP9.99□□□□□ -0.81
ABCB1-210ENST00000543898 CHST3Q7LGC8 479 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 CCDC34Q96HJ3 373 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 CWC15Q9P013 229 aaKnown RBP9.99□□□□□ -0.81
ABCB1-210ENST00000543898 KIAA0232Q92628 1395 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 SSH3Q8TE77 659 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 CTNNA3Q9UI47 895 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 SSH2Q76I76 1423 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 MYOM1P52179 1685 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 LRRC7Q96NW7 1537 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 A0A1B0GVL5 298 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 CCP110O43303 1012 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 SLC3A2P08195 630 aaKnown RBP9.99□□□□□ -0.81
ABCB1-210ENST00000543898 AK7Q96M32 723 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 NDUFB9Q9Y6M9 179 aa9.99□□□□□ -0.81
ABCB1-210ENST00000543898 HSP90B2PQ58FF3 399 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 ZSCAN16Q9H4T2 348 aaPredicted RBP9.98□□□□□ -0.81
ABCB1-210ENST00000543898 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms