RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 DCAF8L1A6NGE4 600 aa28.19■■■□□ 2.1
TRIM65-202ENST00000540128 H0YIN7 160 aa28.19■■■□□ 2.1
TRIM65-202ENST00000540128 C2CD5Q86YS7 1000 aa28.19■■■□□ 2.1
TRIM65-202ENST00000540128 CCDC191Q8NCU4 936 aa28.19■■■□□ 2.1
TRIM65-202ENST00000540128 MYD88Q99836 296 aa28.19■■■□□ 2.1
TRIM65-202ENST00000540128 PIM2Q9P1W9 311 aa28.19■■■□□ 2.1
TRIM65-202ENST00000540128 ANKRD31Q8N7Z5 1873 aa28.19■■■□□ 2.1
TRIM65-202ENST00000540128 RIC1Q4ADV7 1423 aa28.18■■■□□ 2.1
TRIM65-202ENST00000540128 BRPF1P55201 1214 aaPredicted RBP28.18■■■□□ 2.1
TRIM65-202ENST00000540128 N4BP2Q86UW6 1770 aaPredicted RBP28.17■■■□□ 2.1
TRIM65-202ENST00000540128 ABCC12Q96J65 1359 aa28.17■■■□□ 2.1
TRIM65-202ENST00000540128 GPR162Q16538 588 aa28.17■■■□□ 2.1
TRIM65-202ENST00000540128 DNAAF4Q8WXU2 420 aa28.17■■■□□ 2.1
TRIM65-202ENST00000540128 TRMT112Q9UI30 125 aaKnown RBP28.17■■■□□ 2.1
TRIM65-202ENST00000540128 IGKV5-2P06315 115 aa28.16■■■□□ 2.1
TRIM65-202ENST00000540128 SRGNP10124 158 aa28.16■■■□□ 2.1
TRIM65-202ENST00000540128 YBX3P16989 372 aaKnown RBP eCLIP28.16■■■□□ 2.12e-8■□□□□ 8.8
TRIM65-202ENST00000540128 NEXNQ0ZGT2 675 aa28.16■■■□□ 2.1
TRIM65-202ENST00000540128 SH3TC1Q8TE82 1336 aa28.16■■■□□ 2.1
TRIM65-202ENST00000540128 RARSP54136 660 aaKnown RBP28.15■■■□□ 2.1
TRIM65-202ENST00000540128 CRY2Q49AN0 593 aa28.14■■■□□ 2.1
TRIM65-202ENST00000540128 STYK1Q6J9G0 422 aa28.14■■■□□ 2.1
TRIM65-202ENST00000540128 GRIN3BO60391 1043 aa28.13■■■□□ 2.09
TRIM65-202ENST00000540128 ZBTB38Q8NAP3 1195 aaPredicted RBP28.13■■■□□ 2.09
TRIM65-202ENST00000540128 MASTLQ96GX5 879 aa28.13■■■□□ 2.09
TRIM65-202ENST00000540128 SMC4Q9NTJ3 1288 aa28.13■■■□□ 2.09
TRIM65-202ENST00000540128 CWC25Q9NXE8 425 aaPredicted RBP28.13■■■□□ 2.09
TRIM65-202ENST00000540128 PTPRCP08575 1304 aa28.13■■■□□ 2.09
TRIM65-202ENST00000540128 DALRD3Q5D0E6 543 aaKnown RBP28.12■■■□□ 2.09
TRIM65-202ENST00000540128 SYNE4Q8N205 404 aa28.12■■■□□ 2.09
TRIM65-202ENST00000540128 LINS1Q8NG48 757 aa28.12■■■□□ 2.09
TRIM65-202ENST00000540128 BRCA1P38398 1863 aaKnown RBP28.12■■■□□ 2.09
TRIM65-202ENST00000540128 NEURL1BA8MQ27 555 aa28.11■■■□□ 2.09
TRIM65-202ENST00000540128 F6X3S4 739 aa28.11■■■□□ 2.09
TRIM65-202ENST00000540128 NPR1P16066 1061 aa28.11■■■□□ 2.09
TRIM65-202ENST00000540128 PELP1Q8IZL8 1130 aaKnown RBP28.11■■■□□ 2.09
TRIM65-202ENST00000540128 TTLL6Q8N841 843 aa28.11■■■□□ 2.09
TRIM65-202ENST00000540128 FAM89AQ96GI7 184 aa28.11■■■□□ 2.09
TRIM65-202ENST00000540128 BCL2L13Q9BXK5 485 aa28.11■■■□□ 2.09
TRIM65-202ENST00000540128 PCCAP05165 728 aaPredicted RBP28.1■■■□□ 2.09
TRIM65-202ENST00000540128 CNKSR1Q969H4 720 aa28.1■■■□□ 2.09
TRIM65-202ENST00000540128 NLRP3Q96P20 1036 aa28.1■■■□□ 2.09
TRIM65-202ENST00000540128 WWC3Q9ULE0 1092 aa28.1■■■□□ 2.09
TRIM65-202ENST00000540128 BCS1LQ9Y276 419 aa28.1■■■□□ 2.09
TRIM65-202ENST00000540128 HOXA10P31260 410 aaPredicted RBP28.09■■■□□ 2.09
TRIM65-202ENST00000540128 BEND3Q5T5X7 828 aa28.09■■■□□ 2.09
TRIM65-202ENST00000540128 ZNF622Q969S3 477 aaKnown RBP eCLIP28.09■■■□□ 2.09
TRIM65-202ENST00000540128 DLEC1Q9Y238 1755 aa28.09■■■□□ 2.09
TRIM65-202ENST00000540128 HCLS1P14317 486 aaPredicted RBP28.08■■■□□ 2.09
TRIM65-202ENST00000540128 CWF19L2Q2TBE0 894 aaKnown RBP28.08■■■□□ 2.09
TRIM65-202ENST00000540128 C3orf67Q6ZVT6 689 aa28.08■■■□□ 2.09
TRIM65-202ENST00000540128 GCKRQ14397 625 aa28.07■■■□□ 2.08
TRIM65-202ENST00000540128 H7C1W4 665 aa28.06■■■□□ 2.08
TRIM65-202ENST00000540128 COL11A2P13942 1736 aaPredicted RBP28.06■■■□□ 2.08
TRIM65-202ENST00000540128 IRS4O14654 1257 aaPredicted RBP28.05■■■□□ 2.08
TRIM65-202ENST00000540128 HSP90B1P14625 803 aaKnown RBP28.05■■■□□ 2.08
TRIM65-202ENST00000540128 TNRC6CQ9HCJ0 1690 aaKnown RBP28.05■■■□□ 2.08
TRIM65-202ENST00000540128 CDHR2Q9BYE9 1310 aa28.04■■■□□ 2.08
TRIM65-202ENST00000540128 ALDH1L1O75891 902 aa28.04■■■□□ 2.08
TRIM65-202ENST00000540128 ALDH1B1P30837 517 aa28.04■■■□□ 2.08
TRIM65-202ENST00000540128 SF3B3Q15393 1217 aaKnown RBP28.04■■■□□ 2.08
TRIM65-202ENST00000540128 ARHGAP45Q92619 1136 aa28.04■■■□□ 2.08
TRIM65-202ENST00000540128 CRAMP1Q96RY5 1269 aa28.04■■■□□ 2.08
TRIM65-202ENST00000540128 NOB1Q9ULX3 412 aaKnown RBP28.04■■■□□ 2.08
TRIM65-202ENST00000540128 RTL5Q5HYW3 569 aaPredicted RBP28.02■■■□□ 2.08
TRIM65-202ENST00000540128 RPGRQ92834 1020 aaKnown RBP28.02■■■□□ 2.08
TRIM65-202ENST00000540128 CASP7P55210 303 aa28.01■■■□□ 2.07
TRIM65-202ENST00000540128 PRPF40BQ6NWY9 871 aaKnown RBP28.01■■■□□ 2.07
TRIM65-202ENST00000540128 C7orf43Q8WVR3 580 aa28.01■■■□□ 2.07
TRIM65-202ENST00000540128 RBM17Q96I25 401 aaKnown RBP28.01■■■□□ 2.07
TRIM65-202ENST00000540128 SRCIN1Q9C0H9 1055 aa28.01■■■□□ 2.07
TRIM65-202ENST00000540128 ARFGEF1Q9Y6D6 1849 aa28.01■■■□□ 2.07
TRIM65-202ENST00000540128 KIF16BQ96L93 1317 aa28■■■□□ 2.07
TRIM65-202ENST00000540128 BCAR3O75815 825 aa28■■■□□ 2.07
TRIM65-202ENST00000540128 SLC4A10Q6U841 1118 aa28■■■□□ 2.07
TRIM65-202ENST00000540128 JARID2Q92833 1246 aaPredicted RBP28■■■□□ 2.07
TRIM65-202ENST00000540128 API5Q9BZZ5 524 aaKnown RBP28■■■□□ 2.07
TRIM65-202ENST00000540128 PDE8AO60658 829 aa27.99■■■□□ 2.07
TRIM65-202ENST00000540128 UBE3BQ7Z3V4 1068 aa27.98■■■□□ 2.07
TRIM65-202ENST00000540128 PLA2G12BQ9BX93 195 aa27.98■■■□□ 2.07
TRIM65-202ENST00000540128 DDX60Q8IY21 1712 aaKnown RBP27.98■■■□□ 2.07
TRIM65-202ENST00000540128 SLX4Q8IY92 1834 aa27.97■■■□□ 2.07
TRIM65-202ENST00000540128 IPO8O15397 1037 aaKnown RBP27.97■■■□□ 2.07
TRIM65-202ENST00000540128 ARHGAP27Q6ZUM4 889 aa27.96■■■□□ 2.07
TRIM65-202ENST00000540128 GRM8O00222 908 aa27.95■■■□□ 2.06
TRIM65-202ENST00000540128 C21orf2O43822 256 aa27.95■■■□□ 2.06
TRIM65-202ENST00000540128 DDX46Q7L014 1031 aaKnown RBP27.95■■■□□ 2.06
TRIM65-202ENST00000540128 BBOX1O75936 387 aa27.94■■■□□ 2.06
TRIM65-202ENST00000540128 SOGA3Q5TF21 947 aa27.94■■■□□ 2.06
TRIM65-202ENST00000540128 LAMB2P55268 1798 aa27.94■■■□□ 2.06
TRIM65-202ENST00000540128 UTYO14607 1347 aa27.93■■■□□ 2.06
TRIM65-202ENST00000540128 ABCC4O15439 1325 aa27.93■■■□□ 2.06
TRIM65-202ENST00000540128 CCT4P50991 539 aaKnown RBP27.92■■■□□ 2.06
TRIM65-202ENST00000540128 GRAPQ13588 217 aa27.92■■■□□ 2.06
TRIM65-202ENST00000540128 CC2D2BQ6DHV5 1058 aa27.92■■■□□ 2.06
TRIM65-202ENST00000540128 TTLL11Q8NHH1 800 aa27.92■■■□□ 2.06
TRIM65-202ENST00000540128 GRAPLQ8TC17 118 aaPredicted RBP27.92■■■□□ 2.06
TRIM65-202ENST00000540128 C9orf78Q9NZ63 289 aaPredicted RBP27.92■■■□□ 2.06
TRIM65-202ENST00000540128 CTSWP56202 376 aa27.91■■■□□ 2.06
TRIM65-202ENST00000540128 CCDC152Q4G0S7 254 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms