RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 NYXQ9GZU5 481 aa22.9■■□□□ 1.26
DDX55-204ENST00000536079 ANKRD36CQ5JPF3 1778 aa22.9■■□□□ 1.26
DDX55-204ENST00000536079 F6X3S4 739 aa22.89■■□□□ 1.25
DDX55-204ENST00000536079 FKBP5Q13451 457 aaPredicted RBP22.89■■□□□ 1.25
DDX55-204ENST00000536079 PPP1R42Q7Z4L9 355 aa22.89■■□□□ 1.25
DDX55-204ENST00000536079 TNRC6CQ9HCJ0 1690 aaKnown RBP22.89■■□□□ 1.25
DDX55-204ENST00000536079 COL11A2P13942 1736 aaPredicted RBP22.88■■□□□ 1.25
DDX55-204ENST00000536079 KLRG2A4D1S0 409 aaPredicted RBP22.88■■□□□ 1.25
DDX55-204ENST00000536079 GTF2E1P29083 439 aaPredicted RBP22.88■■□□□ 1.25
DDX55-204ENST00000536079 PDE6BP35913 854 aa22.88■■□□□ 1.25
DDX55-204ENST00000536079 TRIM28Q13263 835 aaKnown RBP22.88■■□□□ 1.25
DDX55-204ENST00000536079 JARID2Q92833 1246 aaPredicted RBP22.88■■□□□ 1.25
DDX55-204ENST00000536079 UTRNP46939 3433 aa22.87■■□□□ 1.25
DDX55-204ENST00000536079 H0YIN7 160 aa22.87■■□□□ 1.25
DDX55-204ENST00000536079 SRGNP10124 158 aa22.87■■□□□ 1.25
DDX55-204ENST00000536079 PIM2Q9P1W9 311 aa22.87■■□□□ 1.25
DDX55-204ENST00000536079 TRMT112Q9UI30 125 aaKnown RBP22.87■■□□□ 1.25
DDX55-204ENST00000536079 BCS1LQ9Y276 419 aa22.87■■□□□ 1.25
DDX55-204ENST00000536079 HCLS1P14317 486 aaPredicted RBP22.86■■□□□ 1.25
DDX55-204ENST00000536079 CWF19L2Q2TBE0 894 aaKnown RBP22.86■■□□□ 1.25
DDX55-204ENST00000536079 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
DDX55-204ENST00000536079 FAM89AQ96GI7 184 aa22.86■■□□□ 1.25
DDX55-204ENST00000536079 BRCA1P38398 1863 aaKnown RBP22.85■■□□□ 1.25
DDX55-204ENST00000536079 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
DDX55-204ENST00000536079 DNAAF4Q8WXU2 420 aa22.85■■□□□ 1.25
DDX55-204ENST00000536079 ZNF622Q969S3 477 aaKnown RBP eCLIP22.85■■□□□ 1.251e-12■■□□□ 12.7
DDX55-204ENST00000536079 RARSP54136 660 aaKnown RBP22.84■■□□□ 1.25
DDX55-204ENST00000536079 ALDH1L2Q3SY69 923 aa22.84■■□□□ 1.25
DDX55-204ENST00000536079 NEURL1BA8MQ27 555 aa22.83■■□□□ 1.25
DDX55-204ENST00000536079 CT47B1P0C2W7 299 aaPredicted RBP22.83■■□□□ 1.25
DDX55-204ENST00000536079 DALRD3Q5D0E6 543 aaKnown RBP22.83■■□□□ 1.25
DDX55-204ENST00000536079 SH3TC1Q8TE82 1336 aa22.82■■□□□ 1.24
DDX55-204ENST00000536079 CRY2Q49AN0 593 aa22.82■■□□□ 1.24
DDX55-204ENST00000536079 CCDC191Q8NCU4 936 aa22.82■■□□□ 1.24
DDX55-204ENST00000536079 SMC4Q9NTJ3 1288 aa22.82■■□□□ 1.24
DDX55-204ENST00000536079 CWC25Q9NXE8 425 aaPredicted RBP22.82■■□□□ 1.24
DDX55-204ENST00000536079 RIC1Q4ADV7 1423 aa22.82■■□□□ 1.24
DDX55-204ENST00000536079 CACNA1FO60840 1977 aa22.81■■□□□ 1.24
DDX55-204ENST00000536079 DLEC1Q9Y238 1755 aa22.81■■□□□ 1.24
DDX55-204ENST00000536079 BEND3Q5T5X7 828 aa22.81■■□□□ 1.24
DDX55-204ENST00000536079 STYK1Q6J9G0 422 aa22.81■■□□□ 1.24
DDX55-204ENST00000536079 SLC51AQ86UW1 340 aa22.81■■□□□ 1.24
DDX55-204ENST00000536079 TTLL6Q8N841 843 aa22.81■■□□□ 1.24
DDX55-204ENST00000536079 MASTLQ96GX5 879 aa22.81■■□□□ 1.24
DDX55-204ENST00000536079 ZBTB38Q8NAP3 1195 aaPredicted RBP22.8■■□□□ 1.24
DDX55-204ENST00000536079 PDZRN3Q9UPQ7 1066 aa22.8■■□□□ 1.24
DDX55-204ENST00000536079 RNF123Q5XPI4 1314 aa22.8■■□□□ 1.24
DDX55-204ENST00000536079 DCAF8L1A6NGE4 600 aa22.79■■□□□ 1.24
DDX55-204ENST00000536079 BCAR3O75815 825 aa22.79■■□□□ 1.24
DDX55-204ENST00000536079 NPR1P16066 1061 aa22.79■■□□□ 1.24
DDX55-204ENST00000536079 ZNF219Q9P2Y4 722 aaPredicted RBP22.79■■□□□ 1.24
DDX55-204ENST00000536079 IRS4O14654 1257 aaPredicted RBP22.78■■□□□ 1.24
DDX55-204ENST00000536079 PCCAP05165 728 aaPredicted RBP22.78■■□□□ 1.24
DDX55-204ENST00000536079 NEXNQ0ZGT2 675 aa22.78■■□□□ 1.24
DDX55-204ENST00000536079 GCKRQ14397 625 aa22.78■■□□□ 1.24
DDX55-204ENST00000536079 NOB1Q9ULX3 412 aaKnown RBP22.78■■□□□ 1.24
DDX55-204ENST00000536079 GRIN3BO60391 1043 aa22.77■■□□□ 1.24
DDX55-204ENST00000536079 PRPF40BQ6NWY9 871 aaKnown RBP22.77■■□□□ 1.24
DDX55-204ENST00000536079 SLC4A10Q6U841 1118 aa22.77■■□□□ 1.24
DDX55-204ENST00000536079 LINS1Q8NG48 757 aa22.77■■□□□ 1.24
DDX55-204ENST00000536079 NLRP3Q96P20 1036 aa22.77■■□□□ 1.24
DDX55-204ENST00000536079 DDX60Q8IY21 1712 aaKnown RBP22.77■■□□□ 1.23
DDX55-204ENST00000536079 SLX4Q8IY92 1834 aa22.76■■□□□ 1.23
DDX55-204ENST00000536079 H7C1W4 665 aa22.76■■□□□ 1.23
DDX55-204ENST00000536079 HOXA10P31260 410 aaPredicted RBP22.76■■□□□ 1.23
DDX55-204ENST00000536079 BRPF1P55201 1214 aaPredicted RBP22.76■■□□□ 1.23
DDX55-204ENST00000536079 CASP7P55210 303 aa22.76■■□□□ 1.23
DDX55-204ENST00000536079 OLFM4Q6UX06 510 aa22.76■■□□□ 1.23
DDX55-204ENST00000536079 CNKSR1Q969H4 720 aa22.76■■□□□ 1.23
DDX55-204ENST00000536079 C21orf2O43822 256 aa22.75■■□□□ 1.23
DDX55-204ENST00000536079 ARHGAP27Q6ZUM4 889 aa22.75■■□□□ 1.23
DDX55-204ENST00000536079 C7orf43Q8WVR3 580 aa22.75■■□□□ 1.23
DDX55-204ENST00000536079 YTHDC1Q96MU7 727 aaKnown RBP22.75■■□□□ 1.23
DDX55-204ENST00000536079 PTPRCP08575 1304 aa22.75■■□□□ 1.23
DDX55-204ENST00000536079 RPGRQ92834 1020 aaKnown RBP22.74■■□□□ 1.23
DDX55-204ENST00000536079 TNNQ9UQP3 1299 aa22.74■■□□□ 1.23
DDX55-204ENST00000536079 COL4A1P02462 1669 aa22.74■■□□□ 1.23
DDX55-204ENST00000536079 LAMB2P55268 1798 aa22.73■■□□□ 1.23
DDX55-204ENST00000536079 UBE3BQ7Z3V4 1068 aa22.73■■□□□ 1.23
DDX55-204ENST00000536079 PRELPP51888 382 aa22.72■■□□□ 1.23
DDX55-204ENST00000536079 SF3B3Q15393 1217 aaKnown RBP22.72■■□□□ 1.23
DDX55-204ENST00000536079 ARFGEF1Q9Y6D6 1849 aa22.72■■□□□ 1.23
DDX55-204ENST00000536079 ABCC4O15439 1325 aa22.72■■□□□ 1.23
DDX55-204ENST00000536079 CDHR2Q9BYE9 1310 aa22.72■■□□□ 1.23
DDX55-204ENST00000536079 RASSF7Q02833 373 aa22.71■■□□□ 1.23
DDX55-204ENST00000536079 RBM17Q96I25 401 aaKnown RBP22.71■■□□□ 1.23
DDX55-204ENST00000536079 CCDC85AQ96PX6 553 aaPredicted RBP22.71■■□□□ 1.23
DDX55-204ENST00000536079 CRAMP1Q96RY5 1269 aa22.71■■□□□ 1.23
DDX55-204ENST00000536079 SRCIN1Q9C0H9 1055 aa22.7■■□□□ 1.22
DDX55-204ENST00000536079 CACNA1SQ13698 1873 aa22.69■■□□□ 1.22
DDX55-204ENST00000536079 NFKBIEO00221 500 aa22.69■■□□□ 1.22
DDX55-204ENST00000536079 PDE8AO60658 829 aa22.69■■□□□ 1.22
DDX55-204ENST00000536079 ALDH1L1O75891 902 aa22.69■■□□□ 1.22
DDX55-204ENST00000536079 ALDH1B1P30837 517 aa22.69■■□□□ 1.22
DDX55-204ENST00000536079 SEC31BQ9NQW1 1179 aa22.69■■□□□ 1.22
DDX55-204ENST00000536079 CELF1Q92879 486 aaKnown RBP22.68■■□□□ 1.22
DDX55-204ENST00000536079 TAF1P21675 1872 aa22.67■■□□□ 1.22
DDX55-204ENST00000536079 CTSWP56202 376 aa22.67■■□□□ 1.22
DDX55-204ENST00000536079 EPHA10Q5JZY3 1008 aa22.67■■□□□ 1.22
DDX55-204ENST00000536079 FRAT1Q92837 279 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms