RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
CDC27-208ENST00000532575 WDR17Q8IZU2 1322 aa11.84□□□□□ -0.51
CDC27-208ENST00000532575 EXOC5O00471 708 aa11.83□□□□□ -0.52
CDC27-208ENST00000532575 RGS20O76081 388 aa11.83□□□□□ -0.52
CDC27-208ENST00000532575 NR6A1Q15406 480 aa11.83□□□□□ -0.52
CDC27-208ENST00000532575 STK32BQ9NY57 414 aa11.83□□□□□ -0.52
CDC27-208ENST00000532575 BCL9O00512 1426 aa11.83□□□□□ -0.52
CDC27-208ENST00000532575 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
CDC27-208ENST00000532575 CSB-PGBD3P0DP91 1061 aa11.82□□□□□ -0.52
CDC27-208ENST00000532575 MARCH10Q8NA82 808 aaPredicted RBP11.82□□□□□ -0.52
CDC27-208ENST00000532575 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
CDC27-208ENST00000532575 EPS8L1Q8TE68 723 aa11.82□□□□□ -0.52
CDC27-208ENST00000532575 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
CDC27-208ENST00000532575 V9GY48 417 aaPredicted RBP11.82□□□□□ -0.52
CDC27-208ENST00000532575 USP6P35125 1406 aa11.82□□□□□ -0.52
CDC27-208ENST00000532575 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
CDC27-208ENST00000532575 ZBTB7AO95365 584 aa11.81□□□□□ -0.52
CDC27-208ENST00000532575 TRIM32Q13049 653 aa11.81□□□□□ -0.52
CDC27-208ENST00000532575 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
CDC27-208ENST00000532575 ARHGEF25Q86VW2 580 aa11.81□□□□□ -0.52
CDC27-208ENST00000532575 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
CDC27-208ENST00000532575 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
CDC27-208ENST00000532575 SPRYD7Q5W111 196 aa11.8□□□□□ -0.52
CDC27-208ENST00000532575 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
CDC27-208ENST00000532575 MCM6Q14566 821 aa11.79□□□□□ -0.52
CDC27-208ENST00000532575 PTF1AQ7RTS3 328 aa11.79□□□□□ -0.52
CDC27-208ENST00000532575 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
CDC27-208ENST00000532575 SLIT3O75094 1523 aa11.79□□□□□ -0.52
CDC27-208ENST00000532575 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
CDC27-208ENST00000532575 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
CDC27-208ENST00000532575 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
CDC27-208ENST00000532575 CD2BP2O95400 341 aaKnown RBP11.78□□□□□ -0.52
CDC27-208ENST00000532575 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
CDC27-208ENST00000532575 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
CDC27-208ENST00000532575 TTC21BQ7Z4L5 1316 aa11.78□□□□□ -0.52
CDC27-208ENST00000532575 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
CDC27-208ENST00000532575 CCDC7Q96M83 1385 aa11.78□□□□□ -0.52
CDC27-208ENST00000532575 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.52
CDC27-208ENST00000532575 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
CDC27-208ENST00000532575 BAP1Q92560 729 aa11.77□□□□□ -0.53
CDC27-208ENST00000532575 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
CDC27-208ENST00000532575 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
CDC27-208ENST00000532575 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
CDC27-208ENST00000532575 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
CDC27-208ENST00000532575 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
CDC27-208ENST00000532575 SKOR1P84550 965 aa11.74□□□□□ -0.53
CDC27-208ENST00000532575 ARMC2Q8NEN0 867 aa11.74□□□□□ -0.53
CDC27-208ENST00000532575 ARXQ96QS3 562 aa11.74□□□□□ -0.53
CDC27-208ENST00000532575 FKBPLQ9UIM3 349 aa11.74□□□□□ -0.53
CDC27-208ENST00000532575 SH3BP2P78314 561 aa11.73□□□□□ -0.53
CDC27-208ENST00000532575 FLIIQ13045 1269 aa11.73□□□□□ -0.53
CDC27-208ENST00000532575 CASZ1Q86V15 1759 aa11.73□□□□□ -0.53
CDC27-208ENST00000532575 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
CDC27-208ENST00000532575 ZNF511Q8NB15 262 aa11.73□□□□□ -0.53
CDC27-208ENST00000532575 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
CDC27-208ENST00000532575 COL18A1P39060 1754 aa11.72□□□□□ -0.53
CDC27-208ENST00000532575 TNS2Q63HR2 1409 aa11.72□□□□□ -0.53
CDC27-208ENST00000532575 KTN1Q86UP2 1357 aaKnown RBP11.72□□□□□ -0.53
CDC27-208ENST00000532575 APBB1O00213 710 aa11.72□□□□□ -0.53
CDC27-208ENST00000532575 IL2RBP14784 551 aa11.72□□□□□ -0.53
CDC27-208ENST00000532575 WNT7BP56706 349 aa11.72□□□□□ -0.53
CDC27-208ENST00000532575 L3MBTL2Q969R5 705 aa11.72□□□□□ -0.53
CDC27-208ENST00000532575 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
CDC27-208ENST00000532575 PIK3C2AO00443 1686 aa11.71□□□□□ -0.53
CDC27-208ENST00000532575 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
CDC27-208ENST00000532575 ACSBG1Q96GR2 724 aa11.71□□□□□ -0.53
CDC27-208ENST00000532575 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
CDC27-208ENST00000532575 ABCC6O95255 1503 aa11.7□□□□□ -0.54
CDC27-208ENST00000532575 MAP3K5Q99683 1374 aa11.7□□□□□ -0.54
CDC27-208ENST00000532575 GPR162Q16538 588 aa11.7□□□□□ -0.54
CDC27-208ENST00000532575 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
CDC27-208ENST00000532575 ROCK2O75116 1388 aaKnown RBP11.69□□□□□ -0.54
CDC27-208ENST00000532575 MYOM1P52179 1685 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
CDC27-208ENST00000532575 TRPM1Q7Z4N2 1603 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 SENP3-EIF4A1A0A087X0R7 540 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 GPR37L1O60883 481 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 POLD1P28340 1107 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 C1QTNF8P60827 252 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 SLC27A3Q5K4L6 730 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDC27-208ENST00000532575 PNMA1Q8ND90 353 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
CDC27-208ENST00000532575 AKAP12Q02952 1782 aa11.69□□□□□ -0.54
CDC27-208ENST00000532575 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
CDC27-208ENST00000532575 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
CDC27-208ENST00000532575 ANKRD24Q8TF21 1146 aa11.68□□□□□ -0.54
CDC27-208ENST00000532575 FOXJ1Q92949 421 aa11.68□□□□□ -0.54
CDC27-208ENST00000532575 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
CDC27-208ENST00000532575 NFAT5O94916 1531 aa11.68□□□□□ -0.54
CDC27-208ENST00000532575 UTRNP46939 3433 aa11.67□□□□□ -0.54
CDC27-208ENST00000532575 FOXC1Q12948 553 aa11.67□□□□□ -0.54
CDC27-208ENST00000532575 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
CDC27-208ENST00000532575 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
CDC27-208ENST00000532575 PKD2L1Q9P0L9 805 aa11.67□□□□□ -0.54
CDC27-208ENST00000532575 WNK3Q9BYP7 1800 aa11.67□□□□□ -0.54
CDC27-208ENST00000532575 WNT7AO00755 349 aa11.66□□□□□ -0.54
CDC27-208ENST00000532575 GDF9O60383 454 aa11.66□□□□□ -0.54
CDC27-208ENST00000532575 PDXDC2PQ6P474 469 aa11.66□□□□□ -0.54
CDC27-208ENST00000532575 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms