RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NAGPAQ9UK23 515 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 KCNH4Q9UQ05 1017 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 FAM196BA6NMK8 535 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 LGR5O75473 907 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 RASA1P20936 1047 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 WEE1P30291 646 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 DPYDQ12882 1025 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 CFAP70Q5T0N1 1121 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 SCG3Q8WXD2 468 aaKnown RBP4.02□□□□□ -1.77
CD44-212ENST00000524922 CEP63Q96MT8 703 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 GSX2Q9BZM3 304 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 ANKIB1Q9P2G1 1089 aa4.02□□□□□ -1.77
CD44-212ENST00000524922 USP17L15C9J2P7 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L10C9JJH3 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L13C9JLJ4 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L12C9JPN9 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L11C9JVI0 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L21D6R901 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L18D6R9N7 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L22D6RA61 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L17D6RBQ6 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L19D6RCP7 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L20D6RJB6 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 FAM229AH3BQW9 127 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 TGFBR3LH3BV60 316 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 IGFBP4P22692 258 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 INPP5BP32019 993 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 USP17L24Q0WX57 530 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 DOC2BQ14184 412 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 RTN1Q16799 776 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 Q8N3U1 123 aa4.01□□□□□ -1.77
CD44-212ENST00000524922 QTRT2Q9H974 415 aaKnown RBP4.01□□□□□ -1.77
CD44-212ENST00000524922 SELPP16109 830 aa4□□□□□ -1.77
CD44-212ENST00000524922 ALAS2P22557 587 aa4□□□□□ -1.77
CD44-212ENST00000524922 SRPK2P78362 688 aaKnown RBP4□□□□□ -1.77
CD44-212ENST00000524922 GRIK5Q16478 980 aa4□□□□□ -1.77
CD44-212ENST00000524922 ANKMY2Q8IV38 441 aa4□□□□□ -1.77
CD44-212ENST00000524922 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
CD44-212ENST00000524922 TPSG1Q9NRR2 321 aa4□□□□□ -1.77
CD44-212ENST00000524922 ZFATQ9P243 1243 aa4□□□□□ -1.77
CD44-212ENST00000524922 SLC6A14Q9UN76 642 aa4□□□□□ -1.77
CD44-212ENST00000524922 ZBTB42B2RXF5 422 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 OPLAHO14841 1288 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 GATA4P43694 442 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 AFF1P51825 1210 aaKnown RBP3.99□□□□□ -1.77
CD44-212ENST00000524922 PLAURQ03405 335 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 FAM69CQ0P6D2 419 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 GRIK4Q16099 956 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 BHMTQ93088 406 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 MYO19Q96H55 970 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 EFCC1Q9HA90 598 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 NEUROD4Q9HD90 331 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 KLK14Q9P0G3 267 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 LRFN2Q9ULH4 789 aa3.99□□□□□ -1.77
CD44-212ENST00000524922 A0A0A0MRY4 1105 aa3.98□□□□□ -1.77
CD44-212ENST00000524922 MAP3K6O95382 1288 aa3.98□□□□□ -1.77
CD44-212ENST00000524922 ADGRE1Q14246 886 aa3.98□□□□□ -1.77
CD44-212ENST00000524922 FAM26DQ5JW98 314 aa3.98□□□□□ -1.77
CD44-212ENST00000524922 CHMP7Q8WUX9 453 aaPredicted RBP3.98□□□□□ -1.77
CD44-212ENST00000524922 NGLY1Q96IV0 654 aa3.98□□□□□ -1.77
CD44-212ENST00000524922 CALR3Q96L12 384 aaKnown RBP3.98□□□□□ -1.77
CD44-212ENST00000524922 SSBP4Q9BWG4 385 aaPredicted RBP3.98□□□□□ -1.77
CD44-212ENST00000524922 DNAJB12Q9NXW2 375 aaKnown RBP3.98□□□□□ -1.77
CD44-212ENST00000524922 DYRK3O43781 588 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 LILRB5O75023 590 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 EGFRP00533 1210 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 NFKB1P19838 968 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 LMOD1P29536 600 aaPredicted RBP3.97□□□□□ -1.77
CD44-212ENST00000524922 IDH3AP50213 366 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 CCINQ13939 588 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 MBTPS1Q14703 1052 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 OCLNQ16625 522 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 HIF1AQ16665 826 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 LARP1Q6PKG0 1096 aaKnown RBP3.97□□□□□ -1.77
CD44-212ENST00000524922 TRPM4Q8TD43 1214 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 IFT43Q96FT9 208 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 LPIN3Q9BQK8 851 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 SEMA6BQ9H3T3 888 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 C11orf16Q9NQ32 467 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 ZMIZ1Q9ULJ6 1067 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 CHMP3Q9Y3E7 222 aa3.97□□□□□ -1.77
CD44-212ENST00000524922 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.97□□□□□ -1.77
CD44-212ENST00000524922 SPDYE3A6NKU9 549 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 FOXO3O43524 673 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 ELNP15502 786 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 FKBP5Q13451 457 aaPredicted RBP3.96□□□□□ -1.78
CD44-212ENST00000524922 NEUROD1Q13562 356 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 DGKZQ13574 1117 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 PRRT3Q5FWE3 981 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 PSAPL1Q6NUJ1 521 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 SHISA2Q6UWI4 295 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 FMR1NBQ8N0W7 255 aaPredicted RBP3.96□□□□□ -1.78
CD44-212ENST00000524922 LENG1Q96BZ8 264 aaPredicted RBP3.96□□□□□ -1.78
CD44-212ENST00000524922 HINFPQ9BQA5 517 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 UBE2OQ9C0C9 1292 aaKnown RBP3.96□□□□□ -1.78
CD44-212ENST00000524922 VRTNQ9H8Y1 702 aa3.96□□□□□ -1.78
CD44-212ENST00000524922 DEAF1O75398 565 aaPredicted RBP3.95□□□□□ -1.78
CD44-212ENST00000524922 MICAL2O94851 1124 aa3.95□□□□□ -1.78
CD44-212ENST00000524922 HOXD8P13378 290 aaPredicted RBP3.95□□□□□ -1.78
CD44-212ENST00000524922 TARSP26639 723 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms