RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 ATP10DQ9P241 1426 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 AATKQ6ZMQ8 1374 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 LARGE1O95461 756 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
SPIDR-224ENST00000524126 PDE1AP54750 535 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 GPS2Q13227 327 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 AXDND1Q5T1B0 1012 aaPredicted RBP12□□□□□ -0.49
SPIDR-224ENST00000524126 CEP85Q6P2H3 762 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 TTC6Q86TZ1 520 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 GOLGA6L1Q8N7Z2 621 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 RILPL2Q969X0 211 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 DACT1Q9NYF0 836 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 ADAMTSL3P82987 1691 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 VPS37CA5D8V6 355 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 ZNF165P49910 485 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 THEMISQ8N1K5 641 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 GOLGA5Q8TBA6 731 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 UBXN6Q9BZV1 441 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 L2HGDHQ9H9P8 463 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 ORC3Q9UBD5 711 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 SMC3Q9UQE7 1217 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■■□ 25.9
SPIDR-224ENST00000524126 CEP170BQ9Y4F5 1589 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 WASLO00401 505 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 CPA1P15085 419 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 ATP2B1P20020 1258 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 SNW1Q13573 536 aaKnown RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 SMC1AQ14683 1233 aaKnown RBP11.99□□□□□ -0.49
SPIDR-224ENST00000524126 ZNF622Q969S3 477 aaKnown RBP eCLIP11.99□□□□□ -0.492e-7■□□□□ 8.8
SPIDR-224ENST00000524126 MTMR6Q9Y217 621 aa11.99□□□□□ -0.49
SPIDR-224ENST00000524126 TBC1D8O95759 1140 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
SPIDR-224ENST00000524126 ANAPC15P60006 121 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 CCDC93Q567U6 631 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 CEP83Q9Y592 693 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 ARHGAP23Q9P227 1491 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 CCDC172P0C7W6 258 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 KCNA6P17658 529 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 AK2P54819 239 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 FERMT3Q86UX7 667 aa11.98□□□□□ -0.49
SPIDR-224ENST00000524126 A0A087WWV3 80 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 FYB1O15117 783 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 CHMLP26374 656 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 GJB2P29033 226 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 SLIT1O75093 1534 aa11.97□□□□□ -0.49
SPIDR-224ENST00000524126 DNAJC21Q5F1R6 531 aaKnown RBP11.97□□□□□ -0.49
SPIDR-224ENST00000524126 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
SPIDR-224ENST00000524126 ARGLU1Q9NWB6 273 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-224ENST00000524126 DLC1Q96QB1 1528 aa11.96□□□□□ -0.49
SPIDR-224ENST00000524126 CDC25BP30305 580 aa11.96□□□□□ -0.49
SPIDR-224ENST00000524126 UNC5CLQ8IV45 518 aa11.96□□□□□ -0.49
SPIDR-224ENST00000524126 UBXN4Q92575 508 aa11.96□□□□□ -0.49
SPIDR-224ENST00000524126 ADAM21Q9UKJ8 722 aa11.96□□□□□ -0.49
SPIDR-224ENST00000524126 H3BQF6 201 aa11.96□□□□□ -0.5
SPIDR-224ENST00000524126 MAGEA9P43362 315 aa11.96□□□□□ -0.5
SPIDR-224ENST00000524126 TWISTNBQ3B726 338 aaPredicted RBP11.96□□□□□ -0.5
SPIDR-224ENST00000524126 E4F1Q66K89 784 aaPredicted RBP11.96□□□□□ -0.5
SPIDR-224ENST00000524126 C8orf58Q8NAV2 365 aa11.96□□□□□ -0.5
SPIDR-224ENST00000524126 PPP1R13BQ96KQ4 1090 aa11.96□□□□□ -0.5
SPIDR-224ENST00000524126 AK7Q96M32 723 aa11.96□□□□□ -0.5
SPIDR-224ENST00000524126 API5Q9BZZ5 524 aaKnown RBP11.96□□□□□ -0.5
SPIDR-224ENST00000524126 EIF3CLB5ME19 914 aaKnown RBP11.95□□□□□ -0.5
SPIDR-224ENST00000524126 ACTN2P35609 894 aa11.95□□□□□ -0.5
SPIDR-224ENST00000524126 C11orf57Q6ZUT1 292 aaPredicted RBP11.95□□□□□ -0.5
SPIDR-224ENST00000524126 NME9Q86XW9 330 aa11.95□□□□□ -0.5
SPIDR-224ENST00000524126 EIF3CQ99613 913 aaKnown RBP11.95□□□□□ -0.5
SPIDR-224ENST00000524126 MEIS3Q99687 375 aa11.95□□□□□ -0.5
SPIDR-224ENST00000524126 CXorf56Q9H5V9 222 aa11.95□□□□□ -0.5
SPIDR-224ENST00000524126 MBIPQ9NS73 344 aa11.95□□□□□ -0.5
SPIDR-224ENST00000524126 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
SPIDR-224ENST00000524126 DEF6Q9H4E7 631 aa11.95□□□□□ -0.5
SPIDR-224ENST00000524126 NEMFO60524 1076 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 NR1I2O75469 434 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
SPIDR-224ENST00000524126 ZNF428Q96B54 188 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 TFIP11Q9UBB9 837 aaKnown RBP11.94□□□□□ -0.5
SPIDR-224ENST00000524126 CPS1P31327 1500 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 MSH6P52701 1360 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 IFIT2P09913 472 aaKnown RBP11.94□□□□□ -0.5
SPIDR-224ENST00000524126 CC2D1AQ6P1N0 951 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-224ENST00000524126 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-224ENST00000524126 TTC14Q96N46 770 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 CARD10Q9BWT7 1032 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 CLSTN2Q9H4D0 955 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 PDRG1Q9NUG6 133 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 ELP1O95163 1332 aa11.94□□□□□ -0.5
SPIDR-224ENST00000524126 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-224ENST00000524126 PATL2C9JE40 543 aaKnown RBP11.93□□□□□ -0.5
SPIDR-224ENST00000524126 GNAI3P08754 354 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 HSPA2P54652 639 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 IQCB1Q15051 598 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 CARD6Q9BX69 1037 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 PLEKHA4Q9H4M7 779 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms