RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 APBA3O96018 575 aa8.72□□□□□ -1.01
NSMCE2-211ENST00000523549 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
NSMCE2-211ENST00000523549 EFCC1Q9HA90 598 aa8.72□□□□□ -1.01
NSMCE2-211ENST00000523549 RASA1P20936 1047 aa8.71□□□□□ -1.02
NSMCE2-211ENST00000523549 SEC13P55735 322 aa8.71□□□□□ -1.02
NSMCE2-211ENST00000523549 GRIK4Q16099 956 aa8.71□□□□□ -1.02
NSMCE2-211ENST00000523549 BHMTQ93088 406 aa8.71□□□□□ -1.02
NSMCE2-211ENST00000523549 GSX2Q9BZM3 304 aa8.71□□□□□ -1.02
NSMCE2-211ENST00000523549 DMGDHQ9UI17 866 aaKnown RBP8.71□□□□□ -1.02
NSMCE2-211ENST00000523549 MAFBQ9Y5Q3 323 aaPredicted RBP8.71□□□□□ -1.02
NSMCE2-211ENST00000523549 IER5Q5VY09 327 aa8.7□□□□□ -1.02
NSMCE2-211ENST00000523549 NACC1Q96RE7 527 aa8.7□□□□□ -1.02
NSMCE2-211ENST00000523549 BCS1LQ9Y276 419 aa8.7□□□□□ -1.02
NSMCE2-211ENST00000523549 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
NSMCE2-211ENST00000523549 LILRB5O75023 590 aa8.69□□□□□ -1.02
NSMCE2-211ENST00000523549 HIF1AQ16665 826 aa8.69□□□□□ -1.02
NSMCE2-211ENST00000523549 KANK4Q5T7N3 995 aaPredicted RBP8.69□□□□□ -1.02
NSMCE2-211ENST00000523549 GLMNQ92990 594 aa8.69□□□□□ -1.02
NSMCE2-211ENST00000523549 KRTAP4-8Q9BYQ9 185 aa8.69□□□□□ -1.02
NSMCE2-211ENST00000523549 PTK7Q13308 1070 aa8.68□□□□□ -1.02
NSMCE2-211ENST00000523549 FOXD4L6Q3SYB3 417 aaPredicted RBP8.68□□□□□ -1.02
NSMCE2-211ENST00000523549 FOXD4L3Q6VB84 417 aaPredicted RBP8.68□□□□□ -1.02
NSMCE2-211ENST00000523549 CLUAP1Q96AJ1 413 aa8.68□□□□□ -1.02
NSMCE2-211ENST00000523549 SLC6A14Q9UN76 642 aa8.68□□□□□ -1.02
NSMCE2-211ENST00000523549 A0A0A0MRY4 1105 aa8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 C9orf172C9J069 976 aa8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 DYRK3O43781 588 aa8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 SELPP16109 830 aa8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 RTN1Q16799 776 aa8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 ZMYM1Q5SVZ6 1142 aa8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 TRAPPC3LQ5T215 181 aa8.67□□□□□ -1.02
NSMCE2-211ENST00000523549 TGFBR3LH3BV60 316 aa8.66□□□□□ -1.02
NSMCE2-211ENST00000523549 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
NSMCE2-211ENST00000523549 CRTC2Q53ET0 693 aaPredicted RBP8.66□□□□□ -1.02
NSMCE2-211ENST00000523549 CHMP7Q8WUX9 453 aaPredicted RBP8.66□□□□□ -1.02
NSMCE2-211ENST00000523549 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
NSMCE2-211ENST00000523549 UBE2OQ9C0C9 1292 aaKnown RBP8.66□□□□□ -1.02
NSMCE2-211ENST00000523549 IGFBP4P22692 258 aa8.65□□□□□ -1.02
NSMCE2-211ENST00000523549 AFF1P51825 1210 aaKnown RBP8.65□□□□□ -1.02
NSMCE2-211ENST00000523549 PROSER2Q86WR7 435 aaPredicted RBP8.65□□□□□ -1.02
NSMCE2-211ENST00000523549 LENG1Q96BZ8 264 aaPredicted RBP8.65□□□□□ -1.02
NSMCE2-211ENST00000523549 PPP1R12CQ9BZL4 782 aa8.65□□□□□ -1.02
NSMCE2-211ENST00000523549 DNAJB12Q9NXW2 375 aaKnown RBP8.65□□□□□ -1.02
NSMCE2-211ENST00000523549 ELNP15502 786 aa8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 DPYDQ12882 1025 aa8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 CCINQ13939 588 aa8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 LARP1Q6PKG0 1096 aaKnown RBP8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 NUDT8Q8WV74 236 aa8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 HINFPQ9BQA5 517 aa8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.64□□□□□ -1.03
NSMCE2-211ENST00000523549 INPP5BP32019 993 aa8.63□□□□□ -1.03
NSMCE2-211ENST00000523549 MBTPS1Q14703 1052 aa8.63□□□□□ -1.03
NSMCE2-211ENST00000523549 PSAPL1Q6NUJ1 521 aa8.63□□□□□ -1.03
NSMCE2-211ENST00000523549 IGFLR1Q9H665 355 aa8.63□□□□□ -1.03
NSMCE2-211ENST00000523549 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
NSMCE2-211ENST00000523549 FAM196BA6NMK8 535 aa8.62□□□□□ -1.03
NSMCE2-211ENST00000523549 LGR5O75473 907 aa8.62□□□□□ -1.03
NSMCE2-211ENST00000523549 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
NSMCE2-211ENST00000523549 ARXQ96QS3 562 aa8.62□□□□□ -1.03
NSMCE2-211ENST00000523549 C11orf16Q9NQ32 467 aa8.62□□□□□ -1.03
NSMCE2-211ENST00000523549 ZBTB42B2RXF5 422 aa8.61□□□□□ -1.03
NSMCE2-211ENST00000523549 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
NSMCE2-211ENST00000523549 H2AFB1P0C5Y9 115 aa8.61□□□□□ -1.03
NSMCE2-211ENST00000523549 H2AFB2P0C5Z0 115 aa8.61□□□□□ -1.03
NSMCE2-211ENST00000523549 NFKB1P19838 968 aa8.61□□□□□ -1.03
NSMCE2-211ENST00000523549 TBC1D8BQ0IIM8 1120 aa8.61□□□□□ -1.03
NSMCE2-211ENST00000523549 GRIK5Q16478 980 aa8.61□□□□□ -1.03
NSMCE2-211ENST00000523549 WEE1P30291 646 aa8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 NRG1Q02297 640 aaPredicted RBP8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 PRSS36Q5K4E3 855 aa8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 TXNRD3Q86VQ6 643 aa8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 FMR1NBQ8N0W7 255 aaPredicted RBP8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 PNMA5Q96PV4 448 aa8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 KLK14Q9P0G3 267 aa8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 ZFATQ9P243 1243 aa8.6□□□□□ -1.03
NSMCE2-211ENST00000523549 A6NJR5 290 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L15C9J2P7 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L10C9JJH3 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L13C9JLJ4 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L11C9JVI0 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L21D6R901 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L18D6R9N7 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L22D6RA61 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L17D6RBQ6 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L19D6RCP7 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L20D6RJB6 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 RGS9O75916 674 aaPredicted RBP8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 IDH3AP50213 366 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 RAC1P63000 192 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 USP17L24Q0WX57 530 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 DMRTC2Q8IXT2 367 aaPredicted RBP8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 LPIN3Q9BQK8 851 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
NSMCE2-211ENST00000523549 QTRT2Q9H974 415 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms