RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 BTLAQ7Z6A9 289 aa8.48□□□□□ -1.05
HMGB1P46-201ENST00000520062 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
HMGB1P46-201ENST00000520062 ZIC5Q96T25 663 aa8.48□□□□□ -1.05
HMGB1P46-201ENST00000520062 NEUROD4Q9HD90 331 aa8.48□□□□□ -1.05
HMGB1P46-201ENST00000520062 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
HMGB1P46-201ENST00000520062 CPNE3O75131 537 aaKnown RBP8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 AVPP01185 164 aa8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 ORC1Q13415 861 aa8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 FAM161BQ96MY7 647 aa8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 TIMMDC1Q9NPL8 285 aa8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 C11orf16Q9NQ32 467 aa8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 VTI1BQ9UEU0 232 aa8.47□□□□□ -1.05
HMGB1P46-201ENST00000520062 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 RGS20O76081 388 aa8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 EPB42P16452 691 aa8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 MSX1P28360 303 aa8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 ARSJQ5FYB0 599 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 C6orf118Q5T5N4 469 aa8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 SNX29Q8TEQ0 813 aa8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 SPG7Q9UQ90 795 aa8.46□□□□□ -1.06
HMGB1P46-201ENST00000520062 TNFRSF21O75509 655 aa8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 HDLBPQ00341 1268 aaKnown RBP8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 SCARF1Q14162 830 aa8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 TMEM87AQ8NBN3 555 aa8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 KLRG1Q96E93 195 aa8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 RNF19AQ9NV58 838 aa8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 AK5Q9Y6K8 562 aa8.45□□□□□ -1.06
HMGB1P46-201ENST00000520062 A0A1W2PNR3 127 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 A6NHS1 94 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 GIPC1O14908 333 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 ERCC5P28715 1186 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 ZNF438Q7Z4V0 828 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 CRELD1Q96HD1 420 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 USP35Q9P2H5 1018 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 SOS2Q07890 1332 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P46-201ENST00000520062 UBAP1LF5GYI3 381 aa8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 SMCPP49901 116 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 TYRO3Q06418 890 aa8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 TRIP4Q15650 581 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 CTC1Q2NKJ3 1217 aa8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 DYRK1BQ9Y463 629 aa8.43□□□□□ -1.06
HMGB1P46-201ENST00000520062 EGFRP00533 1210 aa8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 FANCCQ00597 558 aa8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 NLRP8Q86W28 1048 aa8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 METTL16Q86W50 562 aaKnown RBP8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 CMTR1Q8N1G2 835 aaKnown RBP8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 RNF34Q969K3 372 aa8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 ZFYVE28Q9HCC9 887 aa8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 GJA3Q9Y6H8 435 aa8.42□□□□□ -1.06
HMGB1P46-201ENST00000520062 F11P03951 625 aa8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 RHOQP17081 205 aa8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 ZNF76P36508 570 aa8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 LBRQ14739 615 aaKnown RBP8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 SREK1Q8WXA9 508 aaKnown RBP8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 CCDC74AQ96AQ1 378 aa8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 ELP3Q9H9T3 547 aa8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P46-201ENST00000520062 PHACTR2O75167 634 aa8.4□□□□□ -1.06
HMGB1P46-201ENST00000520062 RAD51AP2Q09MP3 1159 aa8.4□□□□□ -1.06
HMGB1P46-201ENST00000520062 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
HMGB1P46-201ENST00000520062 CEP63Q96MT8 703 aa8.4□□□□□ -1.06
HMGB1P46-201ENST00000520062 USP20Q9Y2K6 914 aa8.4□□□□□ -1.06
HMGB1P46-201ENST00000520062 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 GRNP28799 593 aaKnown RBP8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 KCNQ4P56696 695 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 NAALADL2Q58DX5 795 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 NT5DC4Q86YG4 428 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 PMEPA1Q969W9 287 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 DRC1Q96MC2 740 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 SRCIN1Q9C0H9 1055 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 TGIF2Q9GZN2 237 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 C12orf49Q9H741 205 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 NLRP2Q9NX02 1062 aa8.39□□□□□ -1.07
HMGB1P46-201ENST00000520062 XYLBO75191 536 aa8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 CTSHP09668 335 aa8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 BMP1P13497 986 aa8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 SF3A1Q15459 793 aaKnown RBP8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 NLRP13Q86W25 1043 aa8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 CRIPAKQ8N1N5 446 aa8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 BRD7Q9NPI1 651 aa8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 TMEM63CQ9P1W3 806 aa8.38□□□□□ -1.07
HMGB1P46-201ENST00000520062 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
HMGB1P46-201ENST00000520062 DGAT1O75907 488 aa8.37□□□□□ -1.07
HMGB1P46-201ENST00000520062 EFHC2Q5JST6 749 aa8.37□□□□□ -1.07
HMGB1P46-201ENST00000520062 USPL1Q5W0Q7 1092 aa8.37□□□□□ -1.07
HMGB1P46-201ENST00000520062 GALNT12Q8IXK2 581 aa8.37□□□□□ -1.07
HMGB1P46-201ENST00000520062 RUBCNLQ9H714 662 aa8.37□□□□□ -1.07
HMGB1P46-201ENST00000520062 GPAMQ9HCL2 828 aa8.37□□□□□ -1.07
HMGB1P46-201ENST00000520062 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms