RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 CRY2Q49AN0 593 aa20.14■□□□□ 0.81
CSGALNACT1-204ENST00000517494 CNTROBQ8N137 903 aa20.14■□□□□ 0.81
CSGALNACT1-204ENST00000517494 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
CSGALNACT1-204ENST00000517494 UBN2Q6ZU65 1347 aa20.13■□□□□ 0.81
CSGALNACT1-204ENST00000517494 LMOD1P29536 600 aaPredicted RBP20.13■□□□□ 0.81
CSGALNACT1-204ENST00000517494 PSMD1Q99460 953 aa20.13■□□□□ 0.81
CSGALNACT1-204ENST00000517494 ABT1Q9ULW3 272 aaKnown RBP20.13■□□□□ 0.81
CSGALNACT1-204ENST00000517494 MAPK8IP3Q9UPT6 1336 aa20.12■□□□□ 0.81
CSGALNACT1-204ENST00000517494 NFE2L2Q16236 605 aa20.12■□□□□ 0.81
CSGALNACT1-204ENST00000517494 SUSD4Q5VX71 490 aa20.12■□□□□ 0.81
CSGALNACT1-204ENST00000517494 SLC51AQ86UW1 340 aa20.12■□□□□ 0.81
CSGALNACT1-204ENST00000517494 LARGE2Q8N3Y3 721 aa20.12■□□□□ 0.81
CSGALNACT1-204ENST00000517494 RBM17Q96I25 401 aaKnown RBP20.12■□□□□ 0.81
CSGALNACT1-204ENST00000517494 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
CSGALNACT1-204ENST00000517494 CTCFP49711 727 aaPredicted RBP20.11■□□□□ 0.81
CSGALNACT1-204ENST00000517494 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
CSGALNACT1-204ENST00000517494 PAXIP1Q6ZW49 1069 aaPredicted RBP20.1■□□□□ 0.81
CSGALNACT1-204ENST00000517494 DEFB115Q30KQ5 88 aa20.09■□□□□ 0.81
CSGALNACT1-204ENST00000517494 TMX4Q9H1E5 349 aaPredicted RBP20.09■□□□□ 0.81
CSGALNACT1-204ENST00000517494 SNED1Q8TER0 1413 aa20.09■□□□□ 0.81
CSGALNACT1-204ENST00000517494 COL4A5P29400 1685 aa20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 EIF2S2P20042 333 aaKnown RBP20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 HOXA10P31260 410 aaPredicted RBP20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 C3orf67Q6ZVT6 689 aa20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 NIM1KQ8IY84 436 aa20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 PRDM10Q9NQV6 1147 aa20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 TSPYL4Q9UJ04 414 aa20.08■□□□□ 0.81
CSGALNACT1-204ENST00000517494 KDM3BQ7LBC6 1761 aa20.08■□□□□ 0.8
CSGALNACT1-204ENST00000517494 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.8
CSGALNACT1-204ENST00000517494 RASSF10A6NK89 507 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 PPIP5K2O43314 1243 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 NTSR2O95665 410 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 EPS15P42566 896 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 LBX1P52954 281 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 GRM1Q13255 1194 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 PPP1R42Q7Z4L9 355 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 ZNF34Q8IZ26 560 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 ADAMTSL1Q8N6G6 1762 aa20.07■□□□□ 0.8
CSGALNACT1-204ENST00000517494 SCNN1DP51172 638 aa20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 RIC1Q4ADV7 1423 aa20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 GIGYF2Q6Y7W6 1299 aaKnown RBP20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 CRAMP1Q96RY5 1269 aa20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 DDX21Q9NR30 783 aaKnown RBP eCLIP20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 WBP1LQ9NX94 342 aa20.06■□□□□ 0.8
CSGALNACT1-204ENST00000517494 WDR33Q9C0J8 1336 aaKnown RBP20.05■□□□□ 0.8
CSGALNACT1-204ENST00000517494 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
CSGALNACT1-204ENST00000517494 AOC3Q16853 763 aa20.05■□□□□ 0.8
CSGALNACT1-204ENST00000517494 NLRP3Q96P20 1036 aa20.05■□□□□ 0.8
CSGALNACT1-204ENST00000517494 ANXA1P04083 346 aa20.04■□□□□ 0.8
CSGALNACT1-204ENST00000517494 PARP10Q53GL7 1025 aa20.04■□□□□ 0.8
CSGALNACT1-204ENST00000517494 UTP14AQ9BVJ6 771 aaKnown RBP20.04■□□□□ 0.8
CSGALNACT1-204ENST00000517494 NUP98P52948 1817 aa20.04■□□□□ 0.8
CSGALNACT1-204ENST00000517494 DLG5Q8TDM6 1919 aa20.04■□□□□ 0.8
CSGALNACT1-204ENST00000517494 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
CSGALNACT1-204ENST00000517494 NECTIN2Q92692 538 aa20.03■□□□□ 0.8
CSGALNACT1-204ENST00000517494 TRAF5O00463 557 aa20.02■□□□□ 0.8
CSGALNACT1-204ENST00000517494 MAP2K1Q02750 393 aaPredicted RBP20.02■□□□□ 0.8
CSGALNACT1-204ENST00000517494 PROSER3Q2NL68 480 aa20.02■□□□□ 0.8
CSGALNACT1-204ENST00000517494 ATP6V0A2Q9Y487 856 aa20.02■□□□□ 0.8
CSGALNACT1-204ENST00000517494 LTBP1Q14766 1721 aa20.02■□□□□ 0.79
CSGALNACT1-204ENST00000517494 HSPA8P11142 646 aaKnown RBP20.01■□□□□ 0.79
CSGALNACT1-204ENST00000517494 RIPK4P57078 832 aa20.01■□□□□ 0.79
CSGALNACT1-204ENST00000517494 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
CSGALNACT1-204ENST00000517494 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
CSGALNACT1-204ENST00000517494 ABCC4O15439 1325 aa20.01■□□□□ 0.79
CSGALNACT1-204ENST00000517494 ZNF428Q96B54 188 aa20■□□□□ 0.79
CSGALNACT1-204ENST00000517494 CAPNS2Q96L46 248 aa20■□□□□ 0.79
CSGALNACT1-204ENST00000517494 HCLS1P14317 486 aaPredicted RBP19.99■□□□□ 0.79
CSGALNACT1-204ENST00000517494 PDIA6Q15084 440 aa19.99■□□□□ 0.79
CSGALNACT1-204ENST00000517494 CYP4F22Q6NT55 531 aa19.99■□□□□ 0.79
CSGALNACT1-204ENST00000517494 DPP8Q6V1X1 898 aaPredicted RBP19.99■□□□□ 0.79
CSGALNACT1-204ENST00000517494 SUPT20HQ8NEM7 779 aa19.99■□□□□ 0.79
CSGALNACT1-204ENST00000517494 BEGAINQ9BUH8 593 aa19.99■□□□□ 0.79
CSGALNACT1-204ENST00000517494 ECE1P42892 770 aa19.98■□□□□ 0.79
CSGALNACT1-204ENST00000517494 ADARB2Q9NS39 739 aaKnown RBP19.98■□□□□ 0.79
CSGALNACT1-204ENST00000517494 GPRC5DQ9NZD1 345 aa19.98■□□□□ 0.79
CSGALNACT1-204ENST00000517494 ZNRF3Q9ULT6 936 aa19.98■□□□□ 0.79
CSGALNACT1-204ENST00000517494 GMPSP49915 693 aaPredicted RBP19.97■□□□□ 0.79
CSGALNACT1-204ENST00000517494 CXCL9Q07325 125 aa19.97■□□□□ 0.79
CSGALNACT1-204ENST00000517494 SLC10A5Q5PT55 438 aa19.97■□□□□ 0.79
CSGALNACT1-204ENST00000517494 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
CSGALNACT1-204ENST00000517494 LRP10Q7Z4F1 713 aa19.97■□□□□ 0.79
CSGALNACT1-204ENST00000517494 XAGE3Q8WTP9 111 aa19.97■□□□□ 0.79
CSGALNACT1-204ENST00000517494 BCL2L13Q9BXK5 485 aa19.97■□□□□ 0.79
CSGALNACT1-204ENST00000517494 HSP90AB3PQ58FF7 597 aa19.96■□□□□ 0.79
CSGALNACT1-204ENST00000517494 CST9Q5W186 159 aa19.96■□□□□ 0.79
CSGALNACT1-204ENST00000517494 DDX46Q7L014 1031 aaKnown RBP19.96■□□□□ 0.79
CSGALNACT1-204ENST00000517494 MPNDQ8N594 471 aa19.96■□□□□ 0.79
CSGALNACT1-204ENST00000517494 GPR101Q96P66 508 aaPredicted RBP19.96■□□□□ 0.79
CSGALNACT1-204ENST00000517494 TRMT112Q9UI30 125 aaKnown RBP19.96■□□□□ 0.79
CSGALNACT1-204ENST00000517494 BBOX1O75936 387 aa19.95■□□□□ 0.78
CSGALNACT1-204ENST00000517494 RAD17O75943 681 aa19.95■□□□□ 0.78
CSGALNACT1-204ENST00000517494 CELF2O95319 508 aaKnown RBP19.95■□□□□ 0.78
CSGALNACT1-204ENST00000517494 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
CSGALNACT1-204ENST00000517494 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
CSGALNACT1-204ENST00000517494 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
CSGALNACT1-204ENST00000517494 VPS33BQ9H267 617 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms