RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ZSWIM6Q9HCJ5 1215 aa15.04■□□□□ -0
SMAD1-215ENST00000515385 TRMT1Q9NXH9 659 aaKnown RBP15.04■□□□□ -0
SMAD1-215ENST00000515385 CYP46A1Q9Y6A2 500 aa15.04■□□□□ -0
SMAD1-215ENST00000515385 DHX16O60231 1041 aaKnown RBP15.03■□□□□ -0
SMAD1-215ENST00000515385 RAB11FIP3O75154 756 aa15.03■□□□□ -0
SMAD1-215ENST00000515385 CNTROBQ8N137 903 aa15.03■□□□□ -0
SMAD1-215ENST00000515385 CCDC150Q8NCX0 1101 aa15.03■□□□□ -0
SMAD1-215ENST00000515385 FBXO18Q8NFZ0 1043 aa15.03■□□□□ -0
SMAD1-215ENST00000515385 ORC3Q9UBD5 711 aaPredicted RBP15.03■□□□□ -0
SMAD1-215ENST00000515385 NEXMIFQ5QGS0 1516 aa15.03■□□□□ -0
SMAD1-215ENST00000515385 PHLPP2Q6ZVD8 1323 aa15.02■□□□□ -0
SMAD1-215ENST00000515385 GTF2A1P52655 376 aaPredicted RBP15.02■□□□□ -0
SMAD1-215ENST00000515385 GRIPAP1Q4V328 841 aa15.02■□□□□ -0
SMAD1-215ENST00000515385 RASEFQ8IZ41 740 aa15.02■□□□□ -0
SMAD1-215ENST00000515385 NEK11Q8NG66 645 aa15.02■□□□□ -0
SMAD1-215ENST00000515385 LEO1Q8WVC0 666 aaPredicted RBP15.02■□□□□ -0
SMAD1-215ENST00000515385 RUFY2Q8WXA3 655 aa15.02■□□□□ -0
SMAD1-215ENST00000515385 EXOC4Q96A65 974 aa15.02■□□□□ -0
SMAD1-215ENST00000515385 YTHDC2Q9H6S0 1430 aaKnown RBP15.02□□□□□ -0.01
SMAD1-215ENST00000515385 BECN2A8MW95 431 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 LARGE1O95461 756 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 SLC4A2P04920 1241 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 CCDC158Q5M9N0 1113 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 ICE2Q659A1 982 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 CEP120Q8N960 986 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 CCDC191Q8NCU4 936 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 CHMP3Q9Y3E7 222 aa15.02□□□□□ -0.01
SMAD1-215ENST00000515385 DLG5Q8TDM6 1919 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 CERS3Q8IU89 383 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 SLC26A8Q96RN1 970 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 IL25Q9H293 177 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 EFCAB8A8MWE9 144 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 POLR3GO15318 223 aaPredicted RBP15.01□□□□□ -0.01
SMAD1-215ENST00000515385 IVLP07476 585 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 BICD2Q8TD16 824 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 PPP1R13BQ96KQ4 1090 aa15.01□□□□□ -0.01
SMAD1-215ENST00000515385 NPATQ14207 1427 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 FAM83GA6ND36 823 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 NPHP1O15259 732 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 NR1I2O75469 434 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 ARID5BQ14865 1188 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 ANKRD1Q15327 319 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 SRLQ86TD4 932 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 SMARCE1Q969G3 411 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 ANO10Q9NW15 660 aa15□□□□□ -0.01
SMAD1-215ENST00000515385 ATP7BP35670 1465 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 PIK3C2BO00750 1634 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 CDC37L1Q7L3B6 337 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 NFATC2IPQ8NCF5 419 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 MNS1Q8NEH6 495 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 NAT10Q9H0A0 1025 aaKnown RBP14.99□□□□□ -0.01
SMAD1-215ENST00000515385 PTPRMP28827 1452 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 A0A1B0GUL7 405 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 OAS2P29728 719 aaKnown RBP14.99□□□□□ -0.01
SMAD1-215ENST00000515385 ME3Q16798 604 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 E4F1Q66K89 784 aaPredicted RBP14.99□□□□□ -0.01
SMAD1-215ENST00000515385 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 C10orf67Q8IYJ2 551 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 JAKMIP1Q96N16 626 aaKnown RBP14.99□□□□□ -0.01
SMAD1-215ENST00000515385 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
SMAD1-215ENST00000515385 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
SMAD1-215ENST00000515385 ETF1P62495 437 aaKnown RBP14.98□□□□□ -0.01
SMAD1-215ENST00000515385 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMAD1-215ENST00000515385 SMC1AQ14683 1233 aaKnown RBP14.98□□□□□ -0.01
SMAD1-215ENST00000515385 LARP6Q9BRS8 491 aaKnown RBP14.98□□□□□ -0.01
SMAD1-215ENST00000515385 ALDH8A1Q9H2A2 487 aaPredicted RBP14.98□□□□□ -0.01
SMAD1-215ENST00000515385 CFAP45Q9UL16 551 aa14.98□□□□□ -0.01
SMAD1-215ENST00000515385 HECW2Q9P2P5 1572 aa14.98□□□□□ -0.01
SMAD1-215ENST00000515385 ZKSCAN1P17029 563 aaPredicted RBP14.97□□□□□ -0.01
SMAD1-215ENST00000515385 PSMA5P28066 241 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 ST3GAL1Q11201 340 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 PI4K2BQ8TCG2 481 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 RRP15Q9Y3B9 282 aaKnown RBP14.97□□□□□ -0.01
SMAD1-215ENST00000515385 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
SMAD1-215ENST00000515385 TTC41PQ6P2S7 1318 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 CHD2O14647 1828 aaKnown RBP14.97□□□□□ -0.01
SMAD1-215ENST00000515385 PNMA6EA0A0J9YXQ4 647 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 TADA3O75528 432 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 ST5P78524 1137 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 DCTN1Q14203 1278 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
SMAD1-215ENST00000515385 JAKMIP3Q5VZ66 844 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 CEP57L1Q8IYX8 460 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 GPR161Q8N6U8 529 aaKnown RBP14.97□□□□□ -0.01
SMAD1-215ENST00000515385 DNAI1Q9UI46 699 aa14.97□□□□□ -0.01
SMAD1-215ENST00000515385 GUCY2CP25092 1073 aa14.96□□□□□ -0.01
SMAD1-215ENST00000515385 ACTN2P35609 894 aa14.96□□□□□ -0.01
SMAD1-215ENST00000515385 C11orf57Q6ZUT1 292 aaPredicted RBP14.96□□□□□ -0.01
SMAD1-215ENST00000515385 PGBD1Q96JS3 809 aa14.96□□□□□ -0.01
SMAD1-215ENST00000515385 MYCBPQ99417 103 aaPredicted RBP14.96□□□□□ -0.01
SMAD1-215ENST00000515385 CARD10Q9BWT7 1032 aa14.96□□□□□ -0.01
SMAD1-215ENST00000515385 ZSCAN16Q9H4T2 348 aaPredicted RBP14.96□□□□□ -0.01
SMAD1-215ENST00000515385 CABP1Q9NZU7 370 aa14.96□□□□□ -0.01
SMAD1-215ENST00000515385 PLEKHG2Q9H7P9 1386 aa14.96□□□□□ -0.02
SMAD1-215ENST00000515385 TBC1D8O95759 1140 aa14.96□□□□□ -0.02
SMAD1-215ENST00000515385 FERMT3Q86UX7 667 aa14.96□□□□□ -0.02
SMAD1-215ENST00000515385 DHX40Q8IX18 779 aaKnown RBP14.96□□□□□ -0.02
SMAD1-215ENST00000515385 NCAPGQ9BPX3 1015 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms