RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
SDHA-216ENST00000514027 NEXNQ0ZGT2 675 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 PDIA6Q15084 440 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 AK2P54819 239 aa15.08■□□□□ 0
SDHA-216ENST00000514027 KAZALD1Q96I82 304 aa15.08■□□□□ 0
SDHA-216ENST00000514027 CCDC8Q9H0W5 538 aaPredicted RBP15.08■□□□□ 0
SDHA-216ENST00000514027 TMEM63CQ9P1W3 806 aa15.08■□□□□ 0
SDHA-216ENST00000514027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.08■□□□□ 0
SDHA-216ENST00000514027 ALS2Q96Q42 1657 aa15.08■□□□□ 0
SDHA-216ENST00000514027 IGKV5-2P06315 115 aa15.08■□□□□ 0
SDHA-216ENST00000514027 PHKG2P15735 406 aa15.08■□□□□ 0
SDHA-216ENST00000514027 PTH1RQ03431 593 aa15.08■□□□□ 0
SDHA-216ENST00000514027 CHRNA2Q15822 529 aa15.08■□□□□ 0
SDHA-216ENST00000514027 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0
SDHA-216ENST00000514027 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0
SDHA-216ENST00000514027 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
SDHA-216ENST00000514027 MYD88Q99836 296 aa15.08■□□□□ 0
SDHA-216ENST00000514027 MEGF6O75095 1541 aa15.07■□□□□ 0
SDHA-216ENST00000514027 SYCE3A1L190 88 aa15.07■□□□□ 0
SDHA-216ENST00000514027 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
SDHA-216ENST00000514027 GTPBP4Q9BZE4 634 aaKnown RBP15.07■□□□□ 0
SDHA-216ENST00000514027 GDPD2Q9HCC8 539 aa15.07■□□□□ 0
SDHA-216ENST00000514027 ADAMTS7Q9UKP4 1686 aa15.07■□□□□ 0
SDHA-216ENST00000514027 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
SDHA-216ENST00000514027 SASH1O94885 1247 aa15.07■□□□□ 0
SDHA-216ENST00000514027 LARP1Q6PKG0 1096 aaKnown RBP15.07■□□□□ 0
SDHA-216ENST00000514027 COPS6Q7L5N1 327 aa15.07■□□□□ 0
SDHA-216ENST00000514027 TTC5Q8N0Z6 440 aa15.07■□□□□ 0
SDHA-216ENST00000514027 EVI5LQ96CN4 794 aa15.07■□□□□ 0
SDHA-216ENST00000514027 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
SDHA-216ENST00000514027 TLR7Q9NYK1 1049 aaKnown RBP15.07■□□□□ 0
SDHA-216ENST00000514027 KCNJ4P48050 445 aa15.06■□□□□ 0
SDHA-216ENST00000514027 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
SDHA-216ENST00000514027 EAF2Q96CJ1 260 aaPredicted RBP15.06■□□□□ 0
SDHA-216ENST00000514027 TTC14Q96N46 770 aa15.06■□□□□ 0
SDHA-216ENST00000514027 RBSNQ9H1K0 784 aa15.06■□□□□ 0
SDHA-216ENST00000514027 WDR33Q9C0J8 1336 aaKnown RBP15.06■□□□□ 0
SDHA-216ENST00000514027 NEURL1BA8MQ27 555 aa15.05■□□□□ 0
SDHA-216ENST00000514027 MBD3O95983 291 aa15.05■□□□□ 0
SDHA-216ENST00000514027 RUFY3Q7L099 469 aa15.05■□□□□ 0
SDHA-216ENST00000514027 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ 0
SDHA-216ENST00000514027 JAKMIP1Q96N16 626 aaKnown RBP15.05■□□□□ 0
SDHA-216ENST00000514027 LIMCH1Q9UPQ0 1083 aa15.05■□□□□ 0
SDHA-216ENST00000514027 UTYO14607 1347 aa15.05■□□□□ -0
SDHA-216ENST00000514027 IFNL2Q8IZJ0 200 aa15.05■□□□□ -0
SDHA-216ENST00000514027 TMEM94Q12767 1356 aa15.04■□□□□ -0
SDHA-216ENST00000514027 RPAP1Q9BWH6 1393 aaPredicted RBP15.04■□□□□ -0
SDHA-216ENST00000514027 ZNF500O60304 480 aaPredicted RBP15.04■□□□□ -0
SDHA-216ENST00000514027 DTNBO60941 627 aa15.04■□□□□ -0
SDHA-216ENST00000514027 LETM1O95202 739 aaPredicted RBP15.04■□□□□ -0
SDHA-216ENST00000514027 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
SDHA-216ENST00000514027 PAXIP1Q6ZW49 1069 aaPredicted RBP15.04■□□□□ -0
SDHA-216ENST00000514027 FAM227BQ96M60 508 aa15.04■□□□□ -0
SDHA-216ENST00000514027 BOLA2Q9H3K6 86 aa15.04■□□□□ -0
SDHA-216ENST00000514027 MST1RQ04912 1400 aa15.04■□□□□ -0
SDHA-216ENST00000514027 GCKRQ14397 625 aa15.04■□□□□ -0
SDHA-216ENST00000514027 FSD1Q9BTV5 496 aa15.04■□□□□ -0
SDHA-216ENST00000514027 USP16Q9Y5T5 823 aa15.04■□□□□ -0
SDHA-216ENST00000514027 LMTK3Q96Q04 1460 aa15.03■□□□□ -0
SDHA-216ENST00000514027 CCDC171Q6TFL3 1326 aa15.03■□□□□ -0
SDHA-216ENST00000514027 LARGE1O95461 756 aa15.03■□□□□ -0
SDHA-216ENST00000514027 NMIQ13287 307 aaPredicted RBP15.03■□□□□ -0
SDHA-216ENST00000514027 EPHA10Q5JZY3 1008 aa15.03■□□□□ -0
SDHA-216ENST00000514027 LRSAM1Q6UWE0 723 aa15.03■□□□□ -0
SDHA-216ENST00000514027 PDRG1Q9NUG6 133 aa15.03■□□□□ -0
SDHA-216ENST00000514027 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
SDHA-216ENST00000514027 CCDC83Q8IWF9 413 aa15.02■□□□□ -0
SDHA-216ENST00000514027 METTL22Q9BUU2 404 aaPredicted RBP15.02■□□□□ -0
SDHA-216ENST00000514027 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.02■□□□□ -0
SDHA-216ENST00000514027 SNRPA1P09661 255 aaKnown RBP15.02□□□□□ -0.01
SDHA-216ENST00000514027 HS1BP3Q53T59 392 aa15.02□□□□□ -0.01
SDHA-216ENST00000514027 ANKRD13DQ6ZTN6 518 aa15.02□□□□□ -0.01
SDHA-216ENST00000514027 RBM8AQ9Y5S9 174 aaKnown RBP15.02□□□□□ -0.01
SDHA-216ENST00000514027 CYP46A1Q9Y6A2 500 aa15.02□□□□□ -0.01
SDHA-216ENST00000514027 CYP27B1O15528 508 aa15.01□□□□□ -0.01
SDHA-216ENST00000514027 GADD45BO75293 160 aaPredicted RBP15.01□□□□□ -0.01
SDHA-216ENST00000514027 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
SDHA-216ENST00000514027 USP48Q86UV5 1035 aa15.01□□□□□ -0.01
SDHA-216ENST00000514027 DCAF5Q96JK2 942 aa15.01□□□□□ -0.01
SDHA-216ENST00000514027 ATP5J2-PTCD1G3V325 749 aa15.01□□□□□ -0.01
SDHA-216ENST00000514027 PTCD1O75127 700 aaKnown RBP15.01□□□□□ -0.01
SDHA-216ENST00000514027 UBE3BQ7Z3V4 1068 aa15.01□□□□□ -0.01
SDHA-216ENST00000514027 RNF214Q8ND24 703 aa15.01□□□□□ -0.01
SDHA-216ENST00000514027 ZNF830Q96NB3 372 aaPredicted RBP15.01□□□□□ -0.01
SDHA-216ENST00000514027 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
SDHA-216ENST00000514027 AFDNP55196 1824 aaKnown RBP15□□□□□ -0.01
SDHA-216ENST00000514027 A0A0D9SFI3 127 aa15□□□□□ -0.01
SDHA-216ENST00000514027 HIP1O00291 1037 aa15□□□□□ -0.01
SDHA-216ENST00000514027 STX6O43752 255 aa15□□□□□ -0.01
SDHA-216ENST00000514027 ZSCAN22P10073 491 aaPredicted RBP15□□□□□ -0.01
SDHA-216ENST00000514027 SYT1P21579 422 aa15□□□□□ -0.01
SDHA-216ENST00000514027 CABP4P57796 275 aa15□□□□□ -0.01
SDHA-216ENST00000514027 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
SDHA-216ENST00000514027 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
SDHA-216ENST00000514027 CNPY2Q9Y2B0 182 aa15□□□□□ -0.01
SDHA-216ENST00000514027 VPS53Q5VIR6 699 aa15□□□□□ -0.01
SDHA-216ENST00000514027 CREB3L3Q68CJ9 461 aa15□□□□□ -0.01
SDHA-216ENST00000514027 SASS6Q6UVJ0 657 aa15□□□□□ -0.01
SDHA-216ENST00000514027 TCHHQ07283 1943 aa15□□□□□ -0.01
SDHA-216ENST00000514027 TNS3Q68CZ2 1445 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms