RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 CALD1Q05682 793 aaKnown RBP24.84■■□□□ 1.57
MATR3-221ENST00000513121 PPP1R42Q7Z4L9 355 aa24.84■■□□□ 1.57
MATR3-221ENST00000513121 DBF4Q9UBU7 674 aaPredicted RBP24.84■■□□□ 1.57
MATR3-221ENST00000513121 ALDH1B1P30837 517 aa24.83■■□□□ 1.57
MATR3-221ENST00000513121 HOXA10P31260 410 aaPredicted RBP24.83■■□□□ 1.57
MATR3-221ENST00000513121 CCDC93Q567U6 631 aa24.83■■□□□ 1.57
MATR3-221ENST00000513121 SLC10A5Q5PT55 438 aa24.83■■□□□ 1.57
MATR3-221ENST00000513121 SOGA3Q5TF21 947 aa24.83■■□□□ 1.57
MATR3-221ENST00000513121 HSP90AB3PQ58FF7 597 aa24.82■■□□□ 1.56
MATR3-221ENST00000513121 ANKRD13DQ6ZTN6 518 aa24.82■■□□□ 1.56
MATR3-221ENST00000513121 WWC1Q8IX03 1113 aa24.82■■□□□ 1.56
MATR3-221ENST00000513121 HSPA6P17066 643 aa24.81■■□□□ 1.56
MATR3-221ENST00000513121 TSPYL6Q8N831 410 aa24.81■■□□□ 1.56
MATR3-221ENST00000513121 PLBD2Q8NHP8 589 aa24.81■■□□□ 1.56
MATR3-221ENST00000513121 RIC1Q4ADV7 1423 aa24.8■■□□□ 1.56
MATR3-221ENST00000513121 HCLS1P14317 486 aaPredicted RBP24.8■■□□□ 1.56
MATR3-221ENST00000513121 CCDC27Q2M243 656 aa24.8■■□□□ 1.56
MATR3-221ENST00000513121 RPGRQ92834 1020 aaKnown RBP24.8■■□□□ 1.56
MATR3-221ENST00000513121 TSR2Q969E8 191 aaKnown RBP24.8■■□□□ 1.56
MATR3-221ENST00000513121 PHAXQ9H814 394 aaKnown RBP24.8■■□□□ 1.56
MATR3-221ENST00000513121 ZNF277Q9NRM2 450 aaPredicted RBP24.8■■□□□ 1.56
MATR3-221ENST00000513121 HYPKQ9NX55 129 aa24.8■■□□□ 1.56
MATR3-221ENST00000513121 POTECB2RU33 542 aa24.79■■□□□ 1.56
MATR3-221ENST00000513121 ATP5J2-PTCD1G3V325 749 aa24.79■■□□□ 1.56
MATR3-221ENST00000513121 FKBP4Q02790 459 aaKnown RBP eCLIP24.79■■□□□ 1.568e-7■■■□□ 16.6
MATR3-221ENST00000513121 ISCA1Q9BUE6 129 aa24.79■■□□□ 1.56
MATR3-221ENST00000513121 FER1L6Q2WGJ9 1857 aa24.79■■□□□ 1.56
MATR3-221ENST00000513121 RBM17Q96I25 401 aaKnown RBP24.78■■□□□ 1.56
MATR3-221ENST00000513121 NLRP3Q96P20 1036 aa24.78■■□□□ 1.56
MATR3-221ENST00000513121 CRAMP1Q96RY5 1269 aa24.78■■□□□ 1.56
MATR3-221ENST00000513121 TRMT112Q9UI30 125 aaKnown RBP24.78■■□□□ 1.56
MATR3-221ENST00000513121 SNED1Q8TER0 1413 aa24.78■■□□□ 1.56
MATR3-221ENST00000513121 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
MATR3-221ENST00000513121 RTKN2Q8IZC4 609 aa24.77■■□□□ 1.56
MATR3-221ENST00000513121 RBM46Q8TBY0 533 aaKnown RBP24.77■■□□□ 1.56
MATR3-221ENST00000513121 SALL2Q9Y467 1007 aaPredicted RBP24.77■■□□□ 1.56
MATR3-221ENST00000513121 C16orf71Q8IYS4 520 aaPredicted RBP24.75■■□□□ 1.55
MATR3-221ENST00000513121 CEP350Q5VT06 3117 aa24.75■■□□□ 1.55
MATR3-221ENST00000513121 DDNO94850 711 aaPredicted RBP24.74■■□□□ 1.55
MATR3-221ENST00000513121 VEGFAP15692 232 aaPredicted RBP24.74■■□□□ 1.55
MATR3-221ENST00000513121 DPY19L2Q6NUT2 758 aa24.74■■□□□ 1.55
MATR3-221ENST00000513121 SH3TC1Q8TE82 1336 aa24.74■■□□□ 1.55
MATR3-221ENST00000513121 ARFGEF2Q9Y6D5 1785 aa24.74■■□□□ 1.55
MATR3-221ENST00000513121 CACNA1SQ13698 1873 aa24.73■■□□□ 1.55
MATR3-221ENST00000513121 RNF123Q5XPI4 1314 aa24.73■■□□□ 1.55
MATR3-221ENST00000513121 PPEF1O14829 653 aaPredicted RBP24.73■■□□□ 1.55
MATR3-221ENST00000513121 FAM89AQ96GI7 184 aa24.73■■□□□ 1.55
MATR3-221ENST00000513121 ABCC4O15439 1325 aa24.72■■□□□ 1.55
MATR3-221ENST00000513121 NCBP3Q53F19 620 aaKnown RBP24.72■■□□□ 1.55
MATR3-221ENST00000513121 IARSP41252 1262 aaKnown RBP24.71■■□□□ 1.55
MATR3-221ENST00000513121 TRIM28Q13263 835 aaKnown RBP24.71■■□□□ 1.55
MATR3-221ENST00000513121 CC2D2BQ6DHV5 1058 aa24.71■■□□□ 1.55
MATR3-221ENST00000513121 RIC3Q7Z5B4 369 aa24.71■■□□□ 1.55
MATR3-221ENST00000513121 PSMD1Q99460 953 aa24.71■■□□□ 1.55
MATR3-221ENST00000513121 CCDC88AQ3V6T2 1871 aa24.7■■□□□ 1.55
MATR3-221ENST00000513121 IL16Q14005 1332 aa24.7■■□□□ 1.54
MATR3-221ENST00000513121 ZNF541Q9H0D2 1346 aa24.7■■□□□ 1.54
MATR3-221ENST00000513121 RTL5Q5HYW3 569 aaPredicted RBP24.7■■□□□ 1.54
MATR3-221ENST00000513121 CCDC30Q5VVM6 783 aa24.7■■□□□ 1.54
MATR3-221ENST00000513121 FAM9BQ8IZU0 186 aa24.7■■□□□ 1.54
MATR3-221ENST00000513121 TIAM2Q8IVF5 1701 aa24.69■■□□□ 1.54
MATR3-221ENST00000513121 GOLGA2Q08379 1002 aa24.69■■□□□ 1.54
MATR3-221ENST00000513121 FSTL1Q12841 308 aa24.68■■□□□ 1.54
MATR3-221ENST00000513121 MYD88Q99836 296 aa24.68■■□□□ 1.54
MATR3-221ENST00000513121 SPINK5Q9NQ38 1064 aaPredicted RBP24.68■■□□□ 1.54
MATR3-221ENST00000513121 ATP6V0A2Q9Y487 856 aa24.68■■□□□ 1.54
MATR3-221ENST00000513121 TWISTNBQ3B726 338 aaPredicted RBP24.67■■□□□ 1.54
MATR3-221ENST00000513121 FZD9O00144 591 aa24.66■■□□□ 1.54
MATR3-221ENST00000513121 HTRA3P83110 453 aa24.66■■□□□ 1.54
MATR3-221ENST00000513121 G2E3Q7L622 706 aa24.66■■□□□ 1.54
MATR3-221ENST00000513121 JARID2Q92833 1246 aaPredicted RBP24.66■■□□□ 1.54
MATR3-221ENST00000513121 COL4A5P29400 1685 aa24.66■■□□□ 1.54
MATR3-221ENST00000513121 FANCIQ9NVI1 1328 aa24.65■■□□□ 1.54
MATR3-221ENST00000513121 BBOX1O75936 387 aa24.65■■□□□ 1.54
MATR3-221ENST00000513121 DDX46Q7L014 1031 aaKnown RBP24.65■■□□□ 1.54
MATR3-221ENST00000513121 WDR63Q8IWG1 891 aa24.65■■□□□ 1.54
MATR3-221ENST00000513121 SMC1BQ8NDV3 1235 aa24.65■■□□□ 1.54
MATR3-221ENST00000513121 IRS4O14654 1257 aaPredicted RBP24.64■■□□□ 1.54
MATR3-221ENST00000513121 POTEIP0CG38 1075 aa24.64■■□□□ 1.54
MATR3-221ENST00000513121 POTEJP0CG39 1038 aa24.64■■□□□ 1.54
MATR3-221ENST00000513121 APLP1P51693 650 aa24.64■■□□□ 1.54
MATR3-221ENST00000513121 GRAPQ13588 217 aa24.64■■□□□ 1.54
MATR3-221ENST00000513121 SF3B3Q15393 1217 aaKnown RBP24.64■■□□□ 1.54
MATR3-221ENST00000513121 GRAPLQ8TC17 118 aaPredicted RBP24.64■■□□□ 1.54
MATR3-221ENST00000513121 METTL22Q9BUU2 404 aaPredicted RBP24.64■■□□□ 1.54
MATR3-221ENST00000513121 ANKRD36CQ5JPF3 1778 aa24.64■■□□□ 1.53
MATR3-221ENST00000513121 DICER1Q9UPY3 1922 aaKnown RBP24.63■■□□□ 1.53
MATR3-221ENST00000513121 SP8Q8IXZ3 490 aa24.63■■□□□ 1.53
MATR3-221ENST00000513121 CELF1Q92879 486 aaKnown RBP24.63■■□□□ 1.53
MATR3-221ENST00000513121 L3MBTL3Q96JM7 780 aaPredicted RBP24.63■■□□□ 1.53
MATR3-221ENST00000513121 MAP3K2Q9Y2U5 619 aa24.63■■□□□ 1.53
MATR3-221ENST00000513121 WDR90Q96KV7 1748 aa24.63■■□□□ 1.53
MATR3-221ENST00000513121 GRIPAP1Q4V328 841 aa24.62■■□□□ 1.53
MATR3-221ENST00000513121 DNAJC5GQ8N7S2 189 aa24.62■■□□□ 1.53
MATR3-221ENST00000513121 ZBTB38Q8NAP3 1195 aaPredicted RBP24.62■■□□□ 1.53
MATR3-221ENST00000513121 PI4KAP2A4QPH2 592 aa24.61■■□□□ 1.53
MATR3-221ENST00000513121 VAMP4O75379 141 aa24.61■■□□□ 1.53
MATR3-221ENST00000513121 SLC4A2P04920 1241 aa24.61■■□□□ 1.53
MATR3-221ENST00000513121 KSR2Q6VAB6 950 aa24.61■■□□□ 1.53
MATR3-221ENST00000513121 LARGE2Q8N3Y3 721 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms