RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 GJA3Q9Y6H8 435 aa23.86■■□□□ 1.41
CLDND1-217ENST00000508071 MAP3K15Q6ZN16 1313 aa23.85■■□□□ 1.41
CLDND1-217ENST00000508071 RASSF10A6NK89 507 aa23.85■■□□□ 1.41
CLDND1-217ENST00000508071 DEFB115Q30KQ5 88 aa23.85■■□□□ 1.41
CLDND1-217ENST00000508071 RRP7AQ9Y3A4 280 aaKnown RBP23.85■■□□□ 1.41
CLDND1-217ENST00000508071 KDM3BQ7LBC6 1761 aa23.85■■□□□ 1.41
CLDND1-217ENST00000508071 SNED1Q8TER0 1413 aa23.84■■□□□ 1.41
CLDND1-217ENST00000508071 DLG5Q8TDM6 1919 aa23.84■■□□□ 1.41
CLDND1-217ENST00000508071 LMOD1P29536 600 aaPredicted RBP23.84■■□□□ 1.41
CLDND1-217ENST00000508071 ABT1Q9ULW3 272 aaKnown RBP23.84■■□□□ 1.41
CLDND1-217ENST00000508071 LBX1P52954 281 aa23.83■■□□□ 1.41
CLDND1-217ENST00000508071 GRIPAP1Q4V328 841 aa23.83■■□□□ 1.41
CLDND1-217ENST00000508071 GPTP24298 496 aa23.82■■□□□ 1.4
CLDND1-217ENST00000508071 HOXA10P31260 410 aaPredicted RBP23.82■■□□□ 1.4
CLDND1-217ENST00000508071 TTLL7Q6ZT98 887 aa23.82■■□□□ 1.4
CLDND1-217ENST00000508071 RBM17Q96I25 401 aaKnown RBP23.82■■□□□ 1.4
CLDND1-217ENST00000508071 RIC1Q4ADV7 1423 aa23.82■■□□□ 1.4
CLDND1-217ENST00000508071 IBTKQ9P2D0 1353 aaPredicted RBP23.81■■□□□ 1.4
CLDND1-217ENST00000508071 MYL6BP14649 208 aa23.81■■□□□ 1.4
CLDND1-217ENST00000508071 LARGE2Q8N3Y3 721 aa23.81■■□□□ 1.4
CLDND1-217ENST00000508071 WDR33Q9C0J8 1336 aaKnown RBP23.81■■□□□ 1.4
CLDND1-217ENST00000508071 COL4A5P29400 1685 aa23.8■■□□□ 1.4
CLDND1-217ENST00000508071 EIF4A1P60842 406 aaKnown RBP23.8■■□□□ 1.4
CLDND1-217ENST00000508071 MAP2K1Q02750 393 aaPredicted RBP23.8■■□□□ 1.4
CLDND1-217ENST00000508071 ZBTB3Q9H5J0 574 aa23.8■■□□□ 1.4
CLDND1-217ENST00000508071 DDX21Q9NR30 783 aaKnown RBP eCLIP23.8■■□□□ 1.4
CLDND1-217ENST00000508071 PPEF1O14829 653 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-217ENST00000508071 SUSD4Q5VX71 490 aa23.79■■□□□ 1.4
CLDND1-217ENST00000508071 CRAMP1Q96RY5 1269 aa23.79■■□□□ 1.4
CLDND1-217ENST00000508071 UBN2Q6ZU65 1347 aa23.79■■□□□ 1.4
CLDND1-217ENST00000508071 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
CLDND1-217ENST00000508071 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
CLDND1-217ENST00000508071 HSPA8P11142 646 aaKnown RBP23.77■■□□□ 1.4
CLDND1-217ENST00000508071 EPS15P42566 896 aa23.77■■□□□ 1.4
CLDND1-217ENST00000508071 SCNN1DP51172 638 aa23.77■■□□□ 1.4
CLDND1-217ENST00000508071 NIM1KQ8IY84 436 aa23.77■■□□□ 1.4
CLDND1-217ENST00000508071 ZNF34Q8IZ26 560 aa23.77■■□□□ 1.4
CLDND1-217ENST00000508071 TMX4Q9H1E5 349 aaPredicted RBP23.77■■□□□ 1.4
CLDND1-217ENST00000508071 PAXIP1Q6ZW49 1069 aaPredicted RBP23.76■■□□□ 1.39
CLDND1-217ENST00000508071 PPP1R42Q7Z4L9 355 aa23.76■■□□□ 1.39
CLDND1-217ENST00000508071 TRPM7Q96QT4 1865 aa23.76■■□□□ 1.39
CLDND1-217ENST00000508071 NTSR2O95665 410 aa23.75■■□□□ 1.39
CLDND1-217ENST00000508071 NFE2L2Q16236 605 aa23.75■■□□□ 1.39
CLDND1-217ENST00000508071 GIGYF2Q6Y7W6 1299 aaKnown RBP23.75■■□□□ 1.39
CLDND1-217ENST00000508071 USP50Q70EL3 339 aaPredicted RBP23.75■■□□□ 1.39
CLDND1-217ENST00000508071 THUMPD2Q9BTF0 503 aaKnown RBP23.75■■□□□ 1.39
CLDND1-217ENST00000508071 PPIP5K2O43314 1243 aa23.74■■□□□ 1.39
CLDND1-217ENST00000508071 ERBB4Q15303 1308 aa23.74■■□□□ 1.39
CLDND1-217ENST00000508071 ECE1P42892 770 aa23.73■■□□□ 1.39
CLDND1-217ENST00000508071 PARP10Q53GL7 1025 aa23.73■■□□□ 1.39
CLDND1-217ENST00000508071 C3orf67Q6ZVT6 689 aa23.73■■□□□ 1.39
CLDND1-217ENST00000508071 CAPNS2Q96L46 248 aa23.73■■□□□ 1.39
CLDND1-217ENST00000508071 NLRP3Q96P20 1036 aa23.73■■□□□ 1.39
CLDND1-217ENST00000508071 PLEKHF1Q96S99 279 aa23.73■■□□□ 1.39
CLDND1-217ENST00000508071 FMR1Q06787 632 aaKnown RBP eCLIP23.72■■□□□ 1.39
CLDND1-217ENST00000508071 SLC51AQ86UW1 340 aa23.72■■□□□ 1.39
CLDND1-217ENST00000508071 BEGAINQ9BUH8 593 aa23.72■■□□□ 1.39
CLDND1-217ENST00000508071 PNNQ9H307 717 aaKnown RBP23.72■■□□□ 1.39
CLDND1-217ENST00000508071 MAPK8IP3Q9UPT6 1336 aa23.72■■□□□ 1.39
CLDND1-217ENST00000508071 GRM1Q13255 1194 aa23.71■■□□□ 1.39
CLDND1-217ENST00000508071 AOC3Q16853 763 aa23.71■■□□□ 1.39
CLDND1-217ENST00000508071 VPS33BQ9H267 617 aa23.71■■□□□ 1.39
CLDND1-217ENST00000508071 ATP6V0A2Q9Y487 856 aa23.71■■□□□ 1.39
CLDND1-217ENST00000508071 THSD7BQ9C0I4 1608 aa23.7■■□□□ 1.39
CLDND1-217ENST00000508071 ABHD8Q96I13 439 aa23.7■■□□□ 1.38
CLDND1-217ENST00000508071 UTP14AQ9BVJ6 771 aaKnown RBP23.7■■□□□ 1.38
CLDND1-217ENST00000508071 ADARB2Q9NS39 739 aaKnown RBP23.7■■□□□ 1.38
CLDND1-217ENST00000508071 TRAF5O00463 557 aa23.69■■□□□ 1.38
CLDND1-217ENST00000508071 CYP4F22Q6NT55 531 aa23.69■■□□□ 1.38
CLDND1-217ENST00000508071 SUPT20HQ8NEM7 779 aa23.69■■□□□ 1.38
CLDND1-217ENST00000508071 GPR101Q96P66 508 aaPredicted RBP23.69■■□□□ 1.38
CLDND1-217ENST00000508071 TSPYL4Q9UJ04 414 aa23.69■■□□□ 1.38
CLDND1-217ENST00000508071 CST9Q5W186 159 aa23.68■■□□□ 1.38
CLDND1-217ENST00000508071 GPRC5DQ9NZD1 345 aa23.68■■□□□ 1.38
CLDND1-217ENST00000508071 ABCC4O15439 1325 aa23.67■■□□□ 1.38
CLDND1-217ENST00000508071 EIF2S2P20042 333 aaKnown RBP23.67■■□□□ 1.38
CLDND1-217ENST00000508071 SLC10A5Q5PT55 438 aa23.67■■□□□ 1.38
CLDND1-217ENST00000508071 ZNRF3Q9ULT6 936 aa23.67■■□□□ 1.38
CLDND1-217ENST00000508071 TLL2Q9Y6L7 1015 aa23.67■■□□□ 1.38
CLDND1-217ENST00000508071 CXCL9Q07325 125 aa23.66■■□□□ 1.38
CLDND1-217ENST00000508071 DPP8Q6V1X1 898 aaPredicted RBP23.65■■□□□ 1.38
CLDND1-217ENST00000508071 RTFDC1Q9BY42 306 aaPredicted RBP23.65■■□□□ 1.38
CLDND1-217ENST00000508071 BBOX1O75936 387 aa23.64■■□□□ 1.37
CLDND1-217ENST00000508071 GMPSP49915 693 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-217ENST00000508071 PDIA6Q15084 440 aa23.64■■□□□ 1.37
CLDND1-217ENST00000508071 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.37
CLDND1-217ENST00000508071 LAMB2P55268 1798 aa23.64■■□□□ 1.37
CLDND1-217ENST00000508071 ANKRD36CQ5JPF3 1778 aa23.63■■□□□ 1.37
CLDND1-217ENST00000508071 PROSER3Q2NL68 480 aa23.63■■□□□ 1.37
CLDND1-217ENST00000508071 HSP90AB3PQ58FF7 597 aa23.63■■□□□ 1.37
CLDND1-217ENST00000508071 CIAPIN1Q6FI81 312 aa23.63■■□□□ 1.37
CLDND1-217ENST00000508071 SP8Q8IXZ3 490 aa23.63■■□□□ 1.37
CLDND1-217ENST00000508071 MPNDQ8N594 471 aa23.63■■□□□ 1.37
CLDND1-217ENST00000508071 AOC2O75106 756 aa23.62■■□□□ 1.37
CLDND1-217ENST00000508071 CELF2O95319 508 aaKnown RBP23.62■■□□□ 1.37
CLDND1-217ENST00000508071 ANXA1P04083 346 aa23.62■■□□□ 1.37
CLDND1-217ENST00000508071 MAP2K2P36507 400 aa23.62■■□□□ 1.37
CLDND1-217ENST00000508071 BCL2L13Q9BXK5 485 aa23.62■■□□□ 1.37
CLDND1-217ENST00000508071 CDHR2Q9BYE9 1310 aa23.61■■□□□ 1.37
CLDND1-217ENST00000508071 HCLS1P14317 486 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms