RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 ARSDP51689 593 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 PRR20EP86478 221 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 PRR20CP86479 221 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 PRR20DP86480 221 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 PRR20BP86481 221 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 PRR20AP86496 221 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 MMRN1Q13201 1228 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 WDR44Q5JSH3 913 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 NBPF10Q6P3W6 841 aaKnown RBP8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 XKR5Q6UX68 686 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 NT5DC4Q86YG4 428 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 KLRG1Q96E93 195 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 HSH2DQ96JZ2 352 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 FNDC3AQ9Y2H6 1198 aaKnown RBP8.29□□□□□ -1.08
HMGB1P3-201ENST00000502802 INPP5BP32019 993 aa8.28□□□□□ -1.08
HMGB1P3-201ENST00000502802 ZNF76P36508 570 aa8.28□□□□□ -1.08
HMGB1P3-201ENST00000502802 SF3A1Q15459 793 aaKnown RBP8.28□□□□□ -1.08
HMGB1P3-201ENST00000502802 PRICKLE2Q7Z3G6 844 aa8.28□□□□□ -1.08
HMGB1P3-201ENST00000502802 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
HMGB1P3-201ENST00000502802 TNFRSF21O75509 655 aa8.27□□□□□ -1.09
HMGB1P3-201ENST00000502802 ATP4AP20648 1035 aa8.27□□□□□ -1.09
HMGB1P3-201ENST00000502802 LYSMD3Q7Z3D4 306 aa8.27□□□□□ -1.09
HMGB1P3-201ENST00000502802 BTLAQ7Z6A9 289 aa8.27□□□□□ -1.09
HMGB1P3-201ENST00000502802 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
HMGB1P3-201ENST00000502802 CRELD1Q96HD1 420 aa8.27□□□□□ -1.09
HMGB1P3-201ENST00000502802 ZIC5Q96T25 663 aa8.27□□□□□ -1.09
HMGB1P3-201ENST00000502802 BMP2P12643 396 aa8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 EIF4BP23588 611 aaKnown RBP8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 ARSJQ5FYB0 599 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 PDE12Q6L8Q7 609 aaKnown RBP8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 TRIM67Q6ZTA4 783 aa8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 ZNF438Q7Z4V0 828 aa8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 SNX29Q8TEQ0 813 aa8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 TGIF2Q9GZN2 237 aa8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 USP20Q9Y2K6 914 aa8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 RTCBQ9Y3I0 505 aaKnown RBP8.26□□□□□ -1.09
HMGB1P3-201ENST00000502802 A0A1B0GTH6 734 aa8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 CTSHP09668 335 aa8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 LRRC69Q6ZNQ3 347 aa8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 CCDC74AQ96AQ1 378 aa8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 TIMMDC1Q9NPL8 285 aa8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 KCNMB2Q9Y691 235 aa8.25□□□□□ -1.09
HMGB1P3-201ENST00000502802 GIPC1O14908 333 aa8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 MSX1P28360 303 aa8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 TRIP4Q15650 581 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 C6orf118Q5T5N4 469 aa8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 USPL1Q5W0Q7 1092 aa8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 UBXN4Q92575 508 aa8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 NLRP2Q9NX02 1062 aa8.24□□□□□ -1.09
HMGB1P3-201ENST00000502802 EPB42P16452 691 aa8.23□□□□□ -1.09
HMGB1P3-201ENST00000502802 MRPL14Q6P1L8 145 aaKnown RBP8.23□□□□□ -1.09
HMGB1P3-201ENST00000502802 C12orf49Q9H741 205 aa8.23□□□□□ -1.09
HMGB1P3-201ENST00000502802 CCSER2Q9H7U1 834 aa8.23□□□□□ -1.09
HMGB1P3-201ENST00000502802 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
HMGB1P3-201ENST00000502802 PPP1R1BQ9UD71 204 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P3-201ENST00000502802 A0A1W2PNR3 127 aa8.22□□□□□ -1.09
HMGB1P3-201ENST00000502802 PHACTR2O75167 634 aa8.22□□□□□ -1.09
HMGB1P3-201ENST00000502802 RHOQP17081 205 aa8.22□□□□□ -1.09
HMGB1P3-201ENST00000502802 EPS8L3Q8TE67 593 aaKnown RBP8.22□□□□□ -1.09
HMGB1P3-201ENST00000502802 TMEM63CQ9P1W3 806 aa8.22□□□□□ -1.09
HMGB1P3-201ENST00000502802 GJA3Q9Y6H8 435 aa8.22□□□□□ -1.09
HMGB1P3-201ENST00000502802 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
HMGB1P3-201ENST00000502802 PI16Q6UXB8 463 aa8.21□□□□□ -1.1
HMGB1P3-201ENST00000502802 SLC43A3Q8NBI5 491 aa8.21□□□□□ -1.1
HMGB1P3-201ENST00000502802 CEP63Q96MT8 703 aa8.21□□□□□ -1.1
HMGB1P3-201ENST00000502802 TINF2Q9BSI4 451 aa8.21□□□□□ -1.1
HMGB1P3-201ENST00000502802 OSBPL7Q9BZF2 842 aa8.21□□□□□ -1.1
HMGB1P3-201ENST00000502802 GRNP28799 593 aaKnown RBP8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 IRS1P35568 1242 aa8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 TYRO3Q06418 890 aa8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 CRISPLD1Q9H336 500 aa8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 CAPN10Q9HC96 672 aa8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 C11orf16Q9NQ32 467 aa8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 USP31Q70CQ4 1352 aa8.2□□□□□ -1.1
HMGB1P3-201ENST00000502802 XYLBO75191 536 aa8.19□□□□□ -1.1
HMGB1P3-201ENST00000502802 EGFRP00533 1210 aa8.19□□□□□ -1.1
HMGB1P3-201ENST00000502802 SCARF1Q14162 830 aa8.19□□□□□ -1.1
HMGB1P3-201ENST00000502802 SRCIN1Q9C0H9 1055 aa8.19□□□□□ -1.1
HMGB1P3-201ENST00000502802 ACBD3Q9H3P7 528 aa8.19□□□□□ -1.1
HMGB1P3-201ENST00000502802 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
HMGB1P3-201ENST00000502802 FAM8A1Q9UBU6 413 aa8.19□□□□□ -1.1
HMGB1P3-201ENST00000502802 FIGNL2A6NMB9 653 aa8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 PTPN12Q05209 780 aaKnown RBP8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 GNL2Q13823 731 aaKnown RBP8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 HS2ST1Q7LGA3 356 aa8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 NLRP13Q86W25 1043 aa8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 PMEPA1Q969W9 287 aa8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 TANGO6Q9C0B7 1094 aa8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 CHRDQ9H2X0 955 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms