RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	TSR2	Q969E8	191 aa	Known RBP	13.54	□□□□□ -0.24
FXR1-222	ENST00000498658	UTP14A	Q9BVJ6	771 aa	Known RBP	13.54	□□□□□ -0.24
FXR1-222	ENST00000498658	STK31	Q9BXU1	1019 aa		13.54	□□□□□ -0.24
FXR1-222	ENST00000498658	DDX58	O95786	925 aa	Known RBP	13.53	□□□□□ -0.24
FXR1-222	ENST00000498658	ALDH1B1	P30837	517 aa		13.53	□□□□□ -0.24
FXR1-222	ENST00000498658	TWISTNB	Q3B726	338 aa	Predicted RBP	13.53	□□□□□ -0.24
FXR1-222	ENST00000498658	SUSD4	Q5VX71	490 aa		13.53	□□□□□ -0.24
FXR1-222	ENST00000498658	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.53	□□□□□ -0.24
FXR1-222	ENST00000498658	UBN2	Q6ZU65	1347 aa		13.53	□□□□□ -0.24
FXR1-222	ENST00000498658	RIC1	Q4ADV7	1423 aa		13.53	□□□□□ -0.24
FXR1-222	ENST00000498658	SENP3-EIF4A1	A0A087X0R7	540 aa		13.52	□□□□□ -0.25
FXR1-222	ENST00000498658	RIC3	Q7Z5B4	369 aa		13.52	□□□□□ -0.25
FXR1-222	ENST00000498658	FANCI	Q9NVI1	1328 aa		13.52	□□□□□ -0.25
FXR1-222	ENST00000498658	ANKRD36C	Q5JPF3	1778 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	NTSR2	O95665	410 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	CRY2	Q49AN0	593 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	ERFE	Q4G0M1	354 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	SLC10A5	Q5PT55	438 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	DIEXF	Q68CQ4	756 aa	Known RBP	13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	NLRP10	Q86W26	655 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	NUTM1	Q86Y26	1132 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	TSPYL6	Q8N831	410 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	NLRP3	Q96P20	1036 aa		13.51	□□□□□ -0.25
FXR1-222	ENST00000498658	HSP90B1	P14625	803 aa	Known RBP	13.5	□□□□□ -0.25
FXR1-222	ENST00000498658	TRIM28	Q13263	835 aa	Known RBP	13.5	□□□□□ -0.25
FXR1-222	ENST00000498658	PRPF40B	Q6NWY9	871 aa	Known RBP	13.5	□□□□□ -0.25
FXR1-222	ENST00000498658	RPGR	Q92834	1020 aa	Known RBP	13.5	□□□□□ -0.25
FXR1-222	ENST00000498658	TRMT112	Q9UI30	125 aa	Known RBP	13.5	□□□□□ -0.25
FXR1-222	ENST00000498658	COL11A2	P13942	1736 aa	Predicted RBP	13.5	□□□□□ -0.25
FXR1-222	ENST00000498658	ADCY9	O60503	1353 aa		13.49	□□□□□ -0.25
FXR1-222	ENST00000498658	SH3TC1	Q8TE82	1336 aa		13.49	□□□□□ -0.25
FXR1-222	ENST00000498658	ISCA1	Q9BUE6	129 aa		13.49	□□□□□ -0.25
FXR1-222	ENST00000498658	PHAX	Q9H814	394 aa	Known RBP	13.49	□□□□□ -0.25
FXR1-222	ENST00000498658	CACNA1F	O60840	1977 aa		13.49	□□□□□ -0.25
FXR1-222	ENST00000498658	ARFGEF2	Q9Y6D5	1785 aa		13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	ABCC12	Q96J65	1359 aa		13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	ZNF521	Q96K83	1311 aa		13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	C21orf2	O43822	256 aa		13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	LMNB1	P20700	586 aa		13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	HOXA10	P31260	410 aa	Predicted RBP	13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	GRIPAP1	Q4V328	841 aa		13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	C9orf131	Q5VYM1	1079 aa		13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	RBM17	Q96I25	401 aa	Known RBP	13.48	□□□□□ -0.25
FXR1-222	ENST00000498658	LTBP3	Q9NS15	1303 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658		E9PSI1	815 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	VAMP4	O75379	141 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	EXOSC9	Q06265	439 aa	Known RBP	13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	NEXN	Q0ZGT2	675 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	CCDC93	Q567U6	631 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	CC2D2B	Q6DHV5	1058 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	KSR2	Q6VAB6	950 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	CRAMP1	Q96RY5	1269 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	METTL22	Q9BUU2	404 aa	Predicted RBP	13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	TMX4	Q9H1E5	349 aa	Predicted RBP	13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	RNF181	Q9P0P0	153 aa		13.47	□□□□□ -0.25
FXR1-222	ENST00000498658	RTKN2	Q8IZC4	609 aa		13.46	□□□□□ -0.25
FXR1-222	ENST00000498658	CCDC191	Q8NCU4	936 aa		13.46	□□□□□ -0.25
FXR1-222	ENST00000498658	TAOK3	Q9H2K8	898 aa		13.46	□□□□□ -0.25
FXR1-222	ENST00000498658	SLX4	Q8IY92	1834 aa		13.46	□□□□□ -0.26
FXR1-222	ENST00000498658	SBF1	O95248	1867 aa		13.45	□□□□□ -0.26
FXR1-222	ENST00000498658	ATP5J2-PTCD1	G3V325	749 aa		13.45	□□□□□ -0.26
FXR1-222	ENST00000498658	C7orf43	Q8WVR3	580 aa		13.45	□□□□□ -0.26
FXR1-222	ENST00000498658	MYD88	Q99836	296 aa		13.45	□□□□□ -0.26
FXR1-222	ENST00000498658	MAP3K2	Q9Y2U5	619 aa		13.45	□□□□□ -0.26
FXR1-222	ENST00000498658	CACNA1S	Q13698	1873 aa		13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	PI4KAP2	A4QPH2	592 aa		13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	NFKBIE	O00221	500 aa		13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	RASSF7	Q02833	373 aa		13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	FLII	Q13045	1269 aa		13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	DDX46	Q7L014	1031 aa	Known RBP	13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	PI4KAP1	Q8N8J0	262 aa		13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	CWC25	Q9NXE8	425 aa	Predicted RBP	13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	FER1L6	Q2WGJ9	1857 aa		13.44	□□□□□ -0.26
FXR1-222	ENST00000498658	KDM2B	Q8NHM5	1336 aa		13.43	□□□□□ -0.26
FXR1-222	ENST00000498658	BBOX1	O75936	387 aa		13.43	□□□□□ -0.26
FXR1-222	ENST00000498658	HCLS1	P14317	486 aa	Predicted RBP	13.43	□□□□□ -0.26
FXR1-222	ENST00000498658	ZNF428	Q96B54	188 aa		13.43	□□□□□ -0.26
FXR1-222	ENST00000498658	FAM89A	Q96GI7	184 aa		13.43	□□□□□ -0.26
FXR1-222	ENST00000498658	TCERG1	O14776	1098 aa	Known RBP	13.42	□□□□□ -0.26
FXR1-222	ENST00000498658	PPEF1	O14829	653 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-222	ENST00000498658	PCCA	P05165	728 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-222	ENST00000498658	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
FXR1-222	ENST00000498658	FKBP5	Q13451	457 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-222	ENST00000498658	TMC4	Q7Z404	712 aa		13.42	□□□□□ -0.26
FXR1-222	ENST00000498658	MIER1	Q8N108	512 aa		13.42	□□□□□ -0.26
FXR1-222	ENST00000498658	IRS4	O14654	1257 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-222	ENST00000498658	SLFN5	Q08AF3	891 aa		13.41	□□□□□ -0.26
FXR1-222	ENST00000498658	SF3B3	Q15393	1217 aa	Known RBP	13.41	□□□□□ -0.26
FXR1-222	ENST00000498658	DPY19L2	Q6NUT2	758 aa		13.41	□□□□□ -0.26
FXR1-222	ENST00000498658	ZNF526	Q8TF50	670 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-222	ENST00000498658	PSMD1	Q99460	953 aa		13.41	□□□□□ -0.26
FXR1-222	ENST00000498658	CT47B1	P0C2W7	299 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-222	ENST00000498658	DSG3	P32926	999 aa		13.4	□□□□□ -0.26
FXR1-222	ENST00000498658	GRAP	Q13588	217 aa		13.4	□□□□□ -0.26
FXR1-222	ENST00000498658	C3orf67	Q6ZVT6	689 aa		13.4	□□□□□ -0.26
FXR1-222	ENST00000498658	G2E3	Q7L622	706 aa		13.4	□□□□□ -0.26

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