RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SLC26A8Q96RN1 970 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 ATG3Q9NT62 314 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 ITSN1Q15811 1721 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 STX1AQ16623 288 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 SRLQ86TD4 932 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 NFATC2IPQ8NCF5 419 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 CCDC191Q8NCU4 936 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 CCDC150Q8NCX0 1101 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 UBXN4Q92575 508 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 SPATA32Q96LK8 384 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 RICTORQ6R327 1708 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 GNAI3P08754 354 aa15.24■□□□□ 0.03
VEGFA-215ENST00000497139 HMOX1P09601 288 aa15.24■□□□□ 0.03
VEGFA-215ENST00000497139 EXOC6BQ9Y2D4 811 aa15.24■□□□□ 0.03
VEGFA-215ENST00000497139 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
VEGFA-215ENST00000497139 CHL1O00533 1208 aa15.24■□□□□ 0.03
VEGFA-215ENST00000497139 KCNB2Q92953 911 aa15.24■□□□□ 0.03
VEGFA-215ENST00000497139 IVLP07476 585 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 ATP8B2P98198 1209 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 LARP1BQ659C4 914 aaKnown RBP15.23■□□□□ 0.03
VEGFA-215ENST00000497139 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 ATP7BP35670 1465 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 EFCAB8A8MWE9 144 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 CASTP20810 708 aaKnown RBP15.23■□□□□ 0.03
VEGFA-215ENST00000497139 TRMT1Q9NXH9 659 aaKnown RBP15.23■□□□□ 0.03
VEGFA-215ENST00000497139 PTPRMP28827 1452 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 LARGE1O95461 756 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 UNC5CLQ8IV45 518 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 LEO1Q8WVC0 666 aaPredicted RBP15.23■□□□□ 0.03
VEGFA-215ENST00000497139 PPP1R13BQ96KQ4 1090 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 CYP46A1Q9Y6A2 500 aa15.23■□□□□ 0.03
VEGFA-215ENST00000497139 RAPGEF3O95398 923 aa15.22■□□□□ 0.03
VEGFA-215ENST00000497139 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
VEGFA-215ENST00000497139 MYCBPQ99417 103 aaPredicted RBP15.22■□□□□ 0.03
VEGFA-215ENST00000497139 PLEKHG2Q9H7P9 1386 aa15.22■□□□□ 0.03
VEGFA-215ENST00000497139 GUCY2CP25092 1073 aa15.22■□□□□ 0.03
VEGFA-215ENST00000497139 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
VEGFA-215ENST00000497139 C10orf67Q8IYJ2 551 aa15.22■□□□□ 0.03
VEGFA-215ENST00000497139 NCAPGQ9BPX3 1015 aa15.22■□□□□ 0.03
VEGFA-215ENST00000497139 IL25Q9H293 177 aa15.22■□□□□ 0.03
VEGFA-215ENST00000497139 POLR3GO15318 223 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-215ENST00000497139 OAS2P29728 719 aaKnown RBP15.21■□□□□ 0.03
VEGFA-215ENST00000497139 CERS3Q8IU89 383 aa15.21■□□□□ 0.03
VEGFA-215ENST00000497139 CNTROBQ8N137 903 aa15.21■□□□□ 0.03
VEGFA-215ENST00000497139 RRP15Q9Y3B9 282 aaKnown RBP15.21■□□□□ 0.03
VEGFA-215ENST00000497139 TTC41PQ6P2S7 1318 aa15.21■□□□□ 0.03
VEGFA-215ENST00000497139 BECN2A8MW95 431 aa15.21■□□□□ 0.02
VEGFA-215ENST00000497139 RAB11FIP3O75154 756 aa15.21■□□□□ 0.02
VEGFA-215ENST00000497139 ARID5BQ14865 1188 aa15.21■□□□□ 0.02
VEGFA-215ENST00000497139 E4F1Q66K89 784 aaPredicted RBP15.21■□□□□ 0.02
VEGFA-215ENST00000497139 NR1I2O75469 434 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 TADA3O75528 432 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 MNS1Q8NEH6 495 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 RUFY2Q8WXA3 655 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 RPS6KA5O75582 802 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 ACTN2P35609 894 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 ETF1P62495 437 aaKnown RBP15.2■□□□□ 0.02
VEGFA-215ENST00000497139 ST5P78524 1137 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 FAM69CQ0P6D2 419 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
VEGFA-215ENST00000497139 CDC37L1Q7L3B6 337 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 BICD2Q8TD16 824 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 DNAI1Q9UI46 699 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 CHMP3Q9Y3E7 222 aa15.2■□□□□ 0.02
VEGFA-215ENST00000497139 TBC1D8O95759 1140 aa15.19■□□□□ 0.02
VEGFA-215ENST00000497139 MAGEA9P43362 315 aa15.19■□□□□ 0.02
VEGFA-215ENST00000497139 LRRFIP1Q32MZ4 808 aaKnown RBP15.19■□□□□ 0.02
VEGFA-215ENST00000497139 NAT10Q9H0A0 1025 aaKnown RBP15.19■□□□□ 0.02
VEGFA-215ENST00000497139 ANO10Q9NW15 660 aa15.19■□□□□ 0.02
VEGFA-215ENST00000497139 USP16Q9Y5T5 823 aa15.19■□□□□ 0.02
VEGFA-215ENST00000497139 NPHP1O15259 732 aa15.19■□□□□ 0.02
VEGFA-215ENST00000497139 ST3GAL1Q11201 340 aa15.19■□□□□ 0.02
VEGFA-215ENST00000497139 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
VEGFA-215ENST00000497139 GPR161Q8N6U8 529 aaKnown RBP15.19■□□□□ 0.02
VEGFA-215ENST00000497139 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-215ENST00000497139 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
VEGFA-215ENST00000497139 MSL3Q8N5Y2 521 aaKnown RBP15.18■□□□□ 0.02
VEGFA-215ENST00000497139 NRKQ7Z2Y5 1582 aa15.18■□□□□ 0.02
VEGFA-215ENST00000497139 PXDNLA1KZ92 1463 aa15.18■□□□□ 0.02
VEGFA-215ENST00000497139 CLGNO14967 610 aa15.18■□□□□ 0.02
VEGFA-215ENST00000497139 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
VEGFA-215ENST00000497139 ME3Q16798 604 aa15.18■□□□□ 0.02
VEGFA-215ENST00000497139 CC2D1AQ6P1N0 951 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-215ENST00000497139 SECISBP2LQ93073 1101 aaKnown RBP15.18■□□□□ 0.02
VEGFA-215ENST00000497139 SOS1Q07889 1333 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-215ENST00000497139 TRIM66O15016 1216 aa15.17■□□□□ 0.02
VEGFA-215ENST00000497139 TTC31Q49AM3 519 aaPredicted RBP15.17■□□□□ 0.02
VEGFA-215ENST00000497139 REXO1L1PQ8IX06 675 aa15.17■□□□□ 0.02
VEGFA-215ENST00000497139 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
VEGFA-215ENST00000497139 PI4K2BQ8TCG2 481 aa15.17■□□□□ 0.02
VEGFA-215ENST00000497139 JAKMIP1Q96N16 626 aaKnown RBP15.17■□□□□ 0.02
VEGFA-215ENST00000497139 TSPOAP1O95153 1857 aa15.17■□□□□ 0.02
VEGFA-215ENST00000497139 LEKR1Q6ZMV7 388 aa15.17■□□□□ 0.02
VEGFA-215ENST00000497139 C11orf57Q6ZUT1 292 aaPredicted RBP15.17■□□□□ 0.02
VEGFA-215ENST00000497139 DHX40Q8IX18 779 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms