RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
CD46-218ENST00000496723 ZMYND15Q9H091 742 aa7.85□□□□□ -1.15
CD46-218ENST00000496723 ATAD2Q6PL18 1390 aa7.84□□□□□ -1.15
CD46-218ENST00000496723 C9orf172C9J069 976 aa7.84□□□□□ -1.15
CD46-218ENST00000496723 C21orf2O43822 256 aa7.84□□□□□ -1.15
CD46-218ENST00000496723 DKK1O94907 266 aa7.84□□□□□ -1.15
CD46-218ENST00000496723 TRAPPC3LQ5T215 181 aa7.84□□□□□ -1.15
CD46-218ENST00000496723 C8orf86Q6ZUL3 223 aa7.84□□□□□ -1.15
CD46-218ENST00000496723 BHMTQ93088 406 aa7.84□□□□□ -1.15
CD46-218ENST00000496723 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
CD46-218ENST00000496723 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
CD46-218ENST00000496723 DYRK3O43781 588 aa7.83□□□□□ -1.16
CD46-218ENST00000496723 ELNP15502 786 aa7.83□□□□□ -1.16
CD46-218ENST00000496723 IER5Q5VY09 327 aa7.83□□□□□ -1.16
CD46-218ENST00000496723 GLMNQ92990 594 aa7.83□□□□□ -1.16
CD46-218ENST00000496723 ZNF594Q96JF6 807 aaPredicted RBP7.83□□□□□ -1.16
CD46-218ENST00000496723 SEC13P55735 322 aa7.82□□□□□ -1.16
CD46-218ENST00000496723 GRIK4Q16099 956 aa7.82□□□□□ -1.16
CD46-218ENST00000496723 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
CD46-218ENST00000496723 UBE2OQ9C0C9 1292 aaKnown RBP7.82□□□□□ -1.16
CD46-218ENST00000496723 ZNF777Q9ULD5 760 aaPredicted RBP7.82□□□□□ -1.16
CD46-218ENST00000496723 RASA1P20936 1047 aa7.81□□□□□ -1.16
CD46-218ENST00000496723 RAC1P63000 192 aa7.81□□□□□ -1.16
CD46-218ENST00000496723 NRG1Q02297 640 aaPredicted RBP7.81□□□□□ -1.16
CD46-218ENST00000496723 SCG3Q8WXD2 468 aaKnown RBP7.81□□□□□ -1.16
CD46-218ENST00000496723 KRTAP4-8Q9BYQ9 185 aa7.81□□□□□ -1.16
CD46-218ENST00000496723 SLC6A14Q9UN76 642 aa7.81□□□□□ -1.16
CD46-218ENST00000496723 A0A0A0MRY4 1105 aa7.8□□□□□ -1.16
CD46-218ENST00000496723 H2AFB1P0C5Y9 115 aa7.8□□□□□ -1.16
CD46-218ENST00000496723 H2AFB2P0C5Z0 115 aa7.8□□□□□ -1.16
CD46-218ENST00000496723 ADGRE1Q14246 886 aa7.8□□□□□ -1.16
CD46-218ENST00000496723 PCSK7Q16549 785 aa7.8□□□□□ -1.16
CD46-218ENST00000496723 RTN1Q16799 776 aa7.8□□□□□ -1.16
CD46-218ENST00000496723 LENG1Q96BZ8 264 aaPredicted RBP7.8□□□□□ -1.16
CD46-218ENST00000496723 CALR3Q96L12 384 aaKnown RBP7.8□□□□□ -1.16
CD46-218ENST00000496723 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
CD46-218ENST00000496723 JPH1Q9HDC5 661 aaPredicted RBP7.8□□□□□ -1.16
CD46-218ENST00000496723 PNMA5Q96PV4 448 aa7.79□□□□□ -1.16
CD46-218ENST00000496723 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.79□□□□□ -1.16
CD46-218ENST00000496723 TGFBR3LH3BV60 316 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 SELPP16109 830 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 EPB42P16452 691 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 TBC1D8BQ0IIM8 1120 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 CCINQ13939 588 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 MBTPS1Q14703 1052 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 CHMP7Q8WUX9 453 aaPredicted RBP7.78□□□□□ -1.16
CD46-218ENST00000496723 IGFLR1Q9H665 355 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 C11orf16Q9NQ32 467 aa7.78□□□□□ -1.16
CD46-218ENST00000496723 DNAJB12Q9NXW2 375 aaKnown RBP7.78□□□□□ -1.16
CD46-218ENST00000496723 TFIP11Q9UBB9 837 aaKnown RBP7.78□□□□□ -1.16
CD46-218ENST00000496723 MAFBQ9Y5Q3 323 aaPredicted RBP7.78□□□□□ -1.16
CD46-218ENST00000496723 SCO2A0A1W2PP80 73 aa7.77□□□□□ -1.17
CD46-218ENST00000496723 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
CD46-218ENST00000496723 PRSS36Q5K4E3 855 aa7.77□□□□□ -1.17
CD46-218ENST00000496723 PSAPL1Q6NUJ1 521 aa7.77□□□□□ -1.17
CD46-218ENST00000496723 LARP1Q6PKG0 1096 aaKnown RBP7.77□□□□□ -1.17
CD46-218ENST00000496723 TXNRD3Q86VQ6 643 aa7.77□□□□□ -1.17
CD46-218ENST00000496723 NGLY1Q96IV0 654 aa7.77□□□□□ -1.17
CD46-218ENST00000496723 PSMG3-AS1Q96PY0 264 aa7.77□□□□□ -1.17
CD46-218ENST00000496723 RGS9O75916 674 aaPredicted RBP7.76□□□□□ -1.17
CD46-218ENST00000496723 MAP3K6O95382 1288 aa7.76□□□□□ -1.17
CD46-218ENST00000496723 IGFBP4P22692 258 aa7.76□□□□□ -1.17
CD46-218ENST00000496723 FOXD4L6Q3SYB3 417 aaPredicted RBP7.76□□□□□ -1.17
CD46-218ENST00000496723 ARTNQ5T4W7 220 aa7.76□□□□□ -1.17
CD46-218ENST00000496723 FOXD4L3Q6VB84 417 aaPredicted RBP7.76□□□□□ -1.17
CD46-218ENST00000496723 ILDR2Q71H61 639 aa7.76□□□□□ -1.17
CD46-218ENST00000496723 DTWD1Q8N5C7 304 aa7.76□□□□□ -1.17
CD46-218ENST00000496723 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
CD46-218ENST00000496723 HINFPQ9BQA5 517 aa7.76□□□□□ -1.17
CD46-218ENST00000496723 DMGDHQ9UI17 866 aaKnown RBP7.76□□□□□ -1.17
CD46-218ENST00000496723 FMR1NBQ8N0W7 255 aaPredicted RBP7.75□□□□□ -1.17
CD46-218ENST00000496723 ZFP64Q9NPA5 681 aa7.75□□□□□ -1.17
CD46-218ENST00000496723 NFKB1P19838 968 aa7.74□□□□□ -1.17
CD46-218ENST00000496723 FRRS1LQ9P0K9 344 aa7.74□□□□□ -1.17
CD46-218ENST00000496723 NAGPAQ9UK23 515 aa7.74□□□□□ -1.17
CD46-218ENST00000496723 BCS1LQ9Y276 419 aa7.74□□□□□ -1.17
CD46-218ENST00000496723 INPP5BP32019 993 aa7.73□□□□□ -1.17
CD46-218ENST00000496723 PTK7Q13308 1070 aa7.73□□□□□ -1.17
CD46-218ENST00000496723 FAM35AQ86V20 835 aa7.73□□□□□ -1.17
CD46-218ENST00000496723 ARID3CA6NKF2 412 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 FAM196BA6NMK8 535 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 DPYDQ12882 1025 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 MSL1Q68DK7 614 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 SHISA2Q6UWI4 295 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 ERICH6Q7L0X2 663 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 DMRTC2Q8IXT2 367 aaPredicted RBP7.72□□□□□ -1.17
CD46-218ENST00000496723 TTC9Q92623 222 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 USP21Q9UK80 565 aa7.72□□□□□ -1.17
CD46-218ENST00000496723 ARID4AP29374 1257 aaPredicted RBP7.71□□□□□ -1.18
CD46-218ENST00000496723 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
CD46-218ENST00000496723 KANK4Q5T7N3 995 aaPredicted RBP7.71□□□□□ -1.18
CD46-218ENST00000496723 TRPM4Q8TD43 1214 aa7.71□□□□□ -1.18
CD46-218ENST00000496723 IDH3AP50213 366 aa7.7□□□□□ -1.18
CD46-218ENST00000496723 ARSDP51689 593 aa7.7□□□□□ -1.18
CD46-218ENST00000496723 FBXO11Q86XK2 927 aa7.7□□□□□ -1.18
CD46-218ENST00000496723 ANKMY2Q8IV38 441 aa7.7□□□□□ -1.18
CD46-218ENST00000496723 TP53INP1Q96A56 240 aa7.7□□□□□ -1.18
CD46-218ENST00000496723 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
CD46-218ENST00000496723 TIMELESSQ9UNS1 1208 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms