RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 YBX3P16989 372 aaKnown RBP eCLIP21.31■■□□□ 16e-10■■□□□ 13.4
CNOT3-207ENST00000496327 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
CNOT3-207ENST00000496327 MRPL50Q8N5N7 158 aaKnown RBP21.31■■□□□ 1
CNOT3-207ENST00000496327 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
CNOT3-207ENST00000496327 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
CNOT3-207ENST00000496327 KIAA1551Q9HCM1 1747 aa21.3■■□□□ 1
CNOT3-207ENST00000496327 NEXNQ0ZGT2 675 aa21.3■■□□□ 1
CNOT3-207ENST00000496327 SH3TC1Q8TE82 1336 aa21.29■■□□□ 1
CNOT3-207ENST00000496327 RIC1Q4ADV7 1423 aa21.29■■□□□ 1
CNOT3-207ENST00000496327 KLRG2A4D1S0 409 aaPredicted RBP21.29■■□□□ 1
CNOT3-207ENST00000496327 DALRD3Q5D0E6 543 aaKnown RBP21.29■■□□□ 1
CNOT3-207ENST00000496327 CCDC191Q8NCU4 936 aa21.29■■□□□ 1
CNOT3-207ENST00000496327 DNAAF4Q8WXU2 420 aa21.29■■□□□ 1
CNOT3-207ENST00000496327 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
CNOT3-207ENST00000496327 BCS1LQ9Y276 419 aa21.29■■□□□ 1
CNOT3-207ENST00000496327 GRIN3BO60391 1043 aa21.28■■□□□ 1
CNOT3-207ENST00000496327 SRGNP10124 158 aa21.28■■□□□ 1
CNOT3-207ENST00000496327 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
CNOT3-207ENST00000496327 ZNF622Q969S3 477 aaKnown RBP eCLIP21.28■■□□□ 13e-7■□□□□ 9.7
CNOT3-207ENST00000496327 BCL2L13Q9BXK5 485 aa21.28■■□□□ 1
CNOT3-207ENST00000496327 CWC25Q9NXE8 425 aaPredicted RBP21.28■■□□□ 1
CNOT3-207ENST00000496327 STYK1Q6J9G0 422 aa21.27■■□□□ 1
CNOT3-207ENST00000496327 TTLL6Q8N841 843 aa21.27■■□□□ 1
CNOT3-207ENST00000496327 MASTLQ96GX5 879 aa21.27■■□□□ 1
CNOT3-207ENST00000496327 ARFGEF2Q9Y6D5 1785 aa21.27■■□□□ 1
CNOT3-207ENST00000496327 ANKRD36CQ5JPF3 1778 aa21.26■□□□□ 0.99
CNOT3-207ENST00000496327 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
CNOT3-207ENST00000496327 NPR1P16066 1061 aa21.26■□□□□ 0.99
CNOT3-207ENST00000496327 PTPRCP08575 1304 aa21.26■□□□□ 0.99
CNOT3-207ENST00000496327 F6X3S4 739 aa21.25■□□□□ 0.99
CNOT3-207ENST00000496327 CRY2Q49AN0 593 aa21.25■□□□□ 0.99
CNOT3-207ENST00000496327 SYNE4Q8N205 404 aa21.25■□□□□ 0.99
CNOT3-207ENST00000496327 ZBTB38Q8NAP3 1195 aaPredicted RBP21.25■□□□□ 0.99
CNOT3-207ENST00000496327 CNKSR1Q969H4 720 aa21.25■□□□□ 0.99
CNOT3-207ENST00000496327 FAM89AQ96GI7 184 aa21.25■□□□□ 0.99
CNOT3-207ENST00000496327 NLRP3Q96P20 1036 aa21.25■□□□□ 0.99
CNOT3-207ENST00000496327 N4BP2Q86UW6 1770 aaPredicted RBP21.25■□□□□ 0.99
CNOT3-207ENST00000496327 ANKRD31Q8N7Z5 1873 aa21.24■□□□□ 0.99
CNOT3-207ENST00000496327 NEURL1BA8MQ27 555 aa21.24■□□□□ 0.99
CNOT3-207ENST00000496327 HCLS1P14317 486 aaPredicted RBP21.24■□□□□ 0.99
CNOT3-207ENST00000496327 RARSP54136 660 aaKnown RBP21.24■□□□□ 0.99
CNOT3-207ENST00000496327 LINS1Q8NG48 757 aa21.24■□□□□ 0.99
CNOT3-207ENST00000496327 PCCAP05165 728 aaPredicted RBP21.23■□□□□ 0.99
CNOT3-207ENST00000496327 BRPF1P55201 1214 aaPredicted RBP21.23■□□□□ 0.99
CNOT3-207ENST00000496327 CWF19L2Q2TBE0 894 aaKnown RBP21.23■□□□□ 0.99
CNOT3-207ENST00000496327 IRS4O14654 1257 aaPredicted RBP21.22■□□□□ 0.99
CNOT3-207ENST00000496327 HSP90B1P14625 803 aaKnown RBP21.22■□□□□ 0.99
CNOT3-207ENST00000496327 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
CNOT3-207ENST00000496327 C3orf67Q6ZVT6 689 aa21.22■□□□□ 0.99
CNOT3-207ENST00000496327 RPGRQ92834 1020 aaKnown RBP21.22■□□□□ 0.99
CNOT3-207ENST00000496327 BEND3Q5T5X7 828 aa21.21■□□□□ 0.99
CNOT3-207ENST00000496327 TNRC6CQ9HCJ0 1690 aaKnown RBP21.21■□□□□ 0.99
CNOT3-207ENST00000496327 COL11A2P13942 1736 aaPredicted RBP21.21■□□□□ 0.99
CNOT3-207ENST00000496327 CACNA1FO60840 1977 aa21.2■□□□□ 0.98
CNOT3-207ENST00000496327 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
CNOT3-207ENST00000496327 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
CNOT3-207ENST00000496327 SLC4A10Q6U841 1118 aa21.2■□□□□ 0.98
CNOT3-207ENST00000496327 ALDH1B1P30837 517 aa21.19■□□□□ 0.98
CNOT3-207ENST00000496327 GCKRQ14397 625 aa21.19■□□□□ 0.98
CNOT3-207ENST00000496327 RBM17Q96I25 401 aaKnown RBP21.19■□□□□ 0.98
CNOT3-207ENST00000496327 KIF16BQ96L93 1317 aa21.19■□□□□ 0.98
CNOT3-207ENST00000496327 CDHR2Q9BYE9 1310 aa21.19■□□□□ 0.98
CNOT3-207ENST00000496327 JARID2Q92833 1246 aaPredicted RBP21.18■□□□□ 0.98
CNOT3-207ENST00000496327 CRAMP1Q96RY5 1269 aa21.18■□□□□ 0.98
CNOT3-207ENST00000496327 DLEC1Q9Y238 1755 aa21.18■□□□□ 0.98
CNOT3-207ENST00000496327 H7C1W4 665 aa21.17■□□□□ 0.98
CNOT3-207ENST00000496327 ALDH1L1O75891 902 aa21.17■□□□□ 0.98
CNOT3-207ENST00000496327 SF3B3Q15393 1217 aaKnown RBP21.17■□□□□ 0.98
CNOT3-207ENST00000496327 ARHGAP27Q6ZUM4 889 aa21.17■□□□□ 0.98
CNOT3-207ENST00000496327 SRCIN1Q9C0H9 1055 aa21.17■□□□□ 0.98
CNOT3-207ENST00000496327 NOB1Q9ULX3 412 aaKnown RBP21.17■□□□□ 0.98
CNOT3-207ENST00000496327 BRCA1P38398 1863 aaKnown RBP21.17■□□□□ 0.98
CNOT3-207ENST00000496327 PDE8AO60658 829 aa21.16■□□□□ 0.98
CNOT3-207ENST00000496327 UBE3BQ7Z3V4 1068 aa21.16■□□□□ 0.98
CNOT3-207ENST00000496327 API5Q9BZZ5 524 aaKnown RBP21.16■□□□□ 0.98
CNOT3-207ENST00000496327 GOLGB1Q14789 3259 aaKnown RBP21.15■□□□□ 0.98
CNOT3-207ENST00000496327 C21orf2O43822 256 aa21.15■□□□□ 0.98
CNOT3-207ENST00000496327 SOGA3Q5TF21 947 aa21.15■□□□□ 0.98
CNOT3-207ENST00000496327 DDX46Q7L014 1031 aaKnown RBP21.15■□□□□ 0.98
CNOT3-207ENST00000496327 ZNF219Q9P2Y4 722 aaPredicted RBP21.15■□□□□ 0.98
CNOT3-207ENST00000496327 BCAR3O75815 825 aa21.14■□□□□ 0.97
CNOT3-207ENST00000496327 ABCC4O15439 1325 aa21.13■□□□□ 0.97
CNOT3-207ENST00000496327 CASP7P55210 303 aa21.13■□□□□ 0.97
CNOT3-207ENST00000496327 C7orf43Q8WVR3 580 aa21.13■□□□□ 0.97
CNOT3-207ENST00000496327 ARHGAP45Q92619 1136 aa21.13■□□□□ 0.97
CNOT3-207ENST00000496327 GRM8O00222 908 aa21.12■□□□□ 0.97
CNOT3-207ENST00000496327 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
CNOT3-207ENST00000496327 CTSWP56202 376 aa21.12■□□□□ 0.97
CNOT3-207ENST00000496327 GRAPQ13588 217 aa21.12■□□□□ 0.97
CNOT3-207ENST00000496327 CCDC152Q4G0S7 254 aa21.12■□□□□ 0.97
CNOT3-207ENST00000496327 CCDC93Q567U6 631 aa21.12■□□□□ 0.97
CNOT3-207ENST00000496327 GRAPLQ8TC17 118 aaPredicted RBP21.12■□□□□ 0.97
CNOT3-207ENST00000496327 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
CNOT3-207ENST00000496327 PLA2G12BQ9BX93 195 aa21.12■□□□□ 0.97
CNOT3-207ENST00000496327 C9orf78Q9NZ63 289 aaPredicted RBP21.12■□□□□ 0.97
CNOT3-207ENST00000496327 UTRNP46939 3433 aa21.11■□□□□ 0.97
CNOT3-207ENST00000496327 PPEF1O14829 653 aaPredicted RBP21.11■□□□□ 0.97
CNOT3-207ENST00000496327 BBOX1O75936 387 aa21.1■□□□□ 0.97
CNOT3-207ENST00000496327 CCT4P50991 539 aaKnown RBP21.1■□□□□ 0.97
CNOT3-207ENST00000496327 CC2D2BQ6DHV5 1058 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms