RNA–Protein interactions for RNA: ENST00000495321.1

SMG7-209, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-209ENST00000495321 PARD3Q8TEW0 1356 aa9.49□□□□□ -0.89
SMG7-209ENST00000495321 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
SMG7-209ENST00000495321 LILRB3O75022 631 aa9.48□□□□□ -0.89
SMG7-209ENST00000495321 FMNL1O95466 1100 aaPredicted RBP9.48□□□□□ -0.89
SMG7-209ENST00000495321 IL13P35225 146 aa9.48□□□□□ -0.89
SMG7-209ENST00000495321 QPCTQ16769 361 aa9.48□□□□□ -0.89
SMG7-209ENST00000495321 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
SMG7-209ENST00000495321 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
SMG7-209ENST00000495321 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
SMG7-209ENST00000495321 PRKRIP1Q9H875 184 aaPredicted RBP9.48□□□□□ -0.89
SMG7-209ENST00000495321 BRWD3Q6RI45 1802 aa9.47□□□□□ -0.89
SMG7-209ENST00000495321 A0A0G2JS52 829 aa9.47□□□□□ -0.89
SMG7-209ENST00000495321 C6orf229H3BNL8 230 aa9.47□□□□□ -0.89
SMG7-209ENST00000495321 MYT1Q01538 1121 aa9.47□□□□□ -0.89
SMG7-209ENST00000495321 SPSB2Q99619 263 aa9.47□□□□□ -0.89
SMG7-209ENST00000495321 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
SMG7-209ENST00000495321 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
SMG7-209ENST00000495321 DIAPH1O60610 1272 aaKnown RBP9.46□□□□□ -0.9
SMG7-209ENST00000495321 ADH1BP00325 375 aa9.46□□□□□ -0.9
SMG7-209ENST00000495321 IL2RBP14784 551 aa9.46□□□□□ -0.9
SMG7-209ENST00000495321 MTMR2Q13614 643 aa9.46□□□□□ -0.9
SMG7-209ENST00000495321 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
SMG7-209ENST00000495321 RGS12O14924 1447 aa9.46□□□□□ -0.9
SMG7-209ENST00000495321 FAM208AQ9UK61 1670 aaKnown RBP9.45□□□□□ -0.9
SMG7-209ENST00000495321 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
SMG7-209ENST00000495321 EXOC5O00471 708 aa9.45□□□□□ -0.9
SMG7-209ENST00000495321 SOCS7O14512 581 aa9.45□□□□□ -0.9
SMG7-209ENST00000495321 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
SMG7-209ENST00000495321 RETREG3Q86VR2 466 aa9.45□□□□□ -0.9
SMG7-209ENST00000495321 USB1Q9BQ65 265 aaKnown RBP9.45□□□□□ -0.9
SMG7-209ENST00000495321 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
SMG7-209ENST00000495321 DDB1Q16531 1140 aa9.44□□□□□ -0.9
SMG7-209ENST00000495321 FAM182BQ5T319 152 aa9.44□□□□□ -0.9
SMG7-209ENST00000495321 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
SMG7-209ENST00000495321 CFAP53Q96M91 514 aa9.44□□□□□ -0.9
SMG7-209ENST00000495321 MYBBP1AQ9BQG0 1328 aaKnown RBP9.44□□□□□ -0.9
SMG7-209ENST00000495321 THSD7AQ9UPZ6 1657 aa9.44□□□□□ -0.9
SMG7-209ENST00000495321 WNK3Q9BYP7 1800 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 DISP2A7MBM2 1401 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 ANP32CO43423 234 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
SMG7-209ENST00000495321 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 MSS51Q4VC12 460 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 RTL5Q5HYW3 569 aaPredicted RBP9.43□□□□□ -0.9
SMG7-209ENST00000495321 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 SULT6B1Q6IMI4 303 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 FAM160A2Q8N612 972 aaPredicted RBP9.43□□□□□ -0.9
SMG7-209ENST00000495321 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 PLA2G2EQ9NZK7 142 aa9.43□□□□□ -0.9
SMG7-209ENST00000495321 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
SMG7-209ENST00000495321 NCAPD2Q15021 1401 aa9.42□□□□□ -0.9
SMG7-209ENST00000495321 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
SMG7-209ENST00000495321 HMOX1P09601 288 aa9.42□□□□□ -0.9
SMG7-209ENST00000495321 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
SMG7-209ENST00000495321 MARCH10Q8NA82 808 aaPredicted RBP9.42□□□□□ -0.9
SMG7-209ENST00000495321 ZCRB1Q8TBF4 217 aaKnown RBP9.42□□□□□ -0.9
SMG7-209ENST00000495321 COL3A1P02461 1466 aaPredicted RBP9.41□□□□□ -0.9
SMG7-209ENST00000495321 CFAP99D6REC4 459 aa9.41□□□□□ -0.9
SMG7-209ENST00000495321 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
SMG7-209ENST00000495321 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
SMG7-209ENST00000495321 NUDCQ9Y266 331 aa9.41□□□□□ -0.9
SMG7-209ENST00000495321 RGPD1P0DJD0 1748 aa9.41□□□□□ -0.9
SMG7-209ENST00000495321 MEGF6O75095 1541 aa9.41□□□□□ -0.9
SMG7-209ENST00000495321 KAT6BQ8WYB5 2073 aa9.4□□□□□ -0.9
SMG7-209ENST00000495321 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
SMG7-209ENST00000495321 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
SMG7-209ENST00000495321 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
SMG7-209ENST00000495321 U2AF1L5P0DN76 240 aaPredicted RBP9.39□□□□□ -0.91
SMG7-209ENST00000495321 RFC5P40937 340 aa9.39□□□□□ -0.91
SMG7-209ENST00000495321 U2AF1Q01081 240 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMG7-209ENST00000495321 PLEKHO1Q53GL0 409 aaPredicted RBP9.39□□□□□ -0.91
SMG7-209ENST00000495321 FAM196AQ6ZSG2 479 aa9.39□□□□□ -0.91
SMG7-209ENST00000495321 OVOS2A0A0G2JMS6 1433 aa9.39□□□□□ -0.91
SMG7-209ENST00000495321 LRRC37A3O60309 1634 aa9.38□□□□□ -0.91
SMG7-209ENST00000495321 KDRP35968 1356 aa9.38□□□□□ -0.91
SMG7-209ENST00000495321 CYP27B1O15528 508 aa9.38□□□□□ -0.91
SMG7-209ENST00000495321 DXOO77932 396 aaKnown RBP9.38□□□□□ -0.91
SMG7-209ENST00000495321 S1PR4O95977 384 aa9.38□□□□□ -0.91
SMG7-209ENST00000495321 DIEXFQ68CQ4 756 aaKnown RBP9.38□□□□□ -0.91
SMG7-209ENST00000495321 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
SMG7-209ENST00000495321 SHANK3Q9BYB0 1731 aa9.37□□□□□ -0.91
SMG7-209ENST00000495321 JUNDP17535 347 aa9.37□□□□□ -0.91
SMG7-209ENST00000495321 MMP16P51512 607 aa9.37□□□□□ -0.91
SMG7-209ENST00000495321 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
SMG7-209ENST00000495321 DESI1Q6ICB0 168 aa9.37□□□□□ -0.91
SMG7-209ENST00000495321 SBF2Q86WG5 1849 aa9.37□□□□□ -0.91
SMG7-209ENST00000495321 TNS2Q63HR2 1409 aa9.37□□□□□ -0.91
SMG7-209ENST00000495321 TRIM37O94972 964 aa9.36□□□□□ -0.91
SMG7-209ENST00000495321 PHKG2P15735 406 aa9.36□□□□□ -0.91
SMG7-209ENST00000495321 PRKAR2BP31323 418 aa9.36□□□□□ -0.91
SMG7-209ENST00000495321 MTHFSDQ2M296 383 aaKnown RBP9.36□□□□□ -0.91
SMG7-209ENST00000495321 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
SMG7-209ENST00000495321 ACSBG1Q96GR2 724 aa9.36□□□□□ -0.91
SMG7-209ENST00000495321 PHACTR3Q96KR7 559 aa9.36□□□□□ -0.91
SMG7-209ENST00000495321 ADAMTS8Q9UP79 889 aa9.36□□□□□ -0.91
SMG7-209ENST00000495321 PCDH11XQ9BZA7 1347 aa9.35□□□□□ -0.91
SMG7-209ENST00000495321 PCDH11YQ9BZA8 1340 aa9.35□□□□□ -0.91
SMG7-209ENST00000495321 KCNQ2O43526 872 aa9.35□□□□□ -0.91
SMG7-209ENST00000495321 ZNF530Q6P9A1 599 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms