RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 DLG5Q8TDM6 1919 aa18.19■□□□□ 0.5
SAMM50-204ENST00000493161 NUP98P52948 1817 aa18.19■□□□□ 0.5
SAMM50-204ENST00000493161 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
SAMM50-204ENST00000493161 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
SAMM50-204ENST00000493161 PNMA8AQ86V59 439 aaPredicted RBP18.19■□□□□ 0.5
SAMM50-204ENST00000493161 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
SAMM50-204ENST00000493161 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
SAMM50-204ENST00000493161 GJA3Q9Y6H8 435 aa18.19■□□□□ 0.5
SAMM50-204ENST00000493161 TCERG1O14776 1098 aaKnown RBP18.18■□□□□ 0.5
SAMM50-204ENST00000493161 JDP2Q8WYK2 163 aa18.18■□□□□ 0.5
SAMM50-204ENST00000493161 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
SAMM50-204ENST00000493161 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
SAMM50-204ENST00000493161 WBP1LQ9NX94 342 aa18.18■□□□□ 0.5
SAMM50-204ENST00000493161 RASSF10A6NK89 507 aa18.17■□□□□ 0.5
SAMM50-204ENST00000493161 HOXA10P31260 410 aaPredicted RBP18.17■□□□□ 0.5
SAMM50-204ENST00000493161 EPS15P42566 896 aa18.17■□□□□ 0.5
SAMM50-204ENST00000493161 CTCFP49711 727 aaPredicted RBP18.17■□□□□ 0.5
SAMM50-204ENST00000493161 KIF6Q6ZMV9 814 aa18.17■□□□□ 0.5
SAMM50-204ENST00000493161 RPGRQ92834 1020 aaKnown RBP18.17■□□□□ 0.5
SAMM50-204ENST00000493161 SCNN1DP51172 638 aa18.16■□□□□ 0.5
SAMM50-204ENST00000493161 LBX1P52954 281 aa18.16■□□□□ 0.5
SAMM50-204ENST00000493161 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
SAMM50-204ENST00000493161 ZNF34Q8IZ26 560 aa18.16■□□□□ 0.5
SAMM50-204ENST00000493161 PNISRQ8TF01 805 aaKnown RBP18.16■□□□□ 0.5
SAMM50-204ENST00000493161 AIDAQ96BJ3 306 aa18.16■□□□□ 0.5
SAMM50-204ENST00000493161 NTSR2O95665 410 aa18.15■□□□□ 0.5
SAMM50-204ENST00000493161 EIF6P56537 245 aaKnown RBP18.15■□□□□ 0.5
SAMM50-204ENST00000493161 RIC1Q4ADV7 1423 aa18.15■□□□□ 0.5
SAMM50-204ENST00000493161 PPEF1O14829 653 aaPredicted RBP18.14■□□□□ 0.49
SAMM50-204ENST00000493161 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
SAMM50-204ENST00000493161 CC2D2BQ6DHV5 1058 aa18.14■□□□□ 0.49
SAMM50-204ENST00000493161 LARGE2Q8N3Y3 721 aa18.14■□□□□ 0.49
SAMM50-204ENST00000493161 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
SAMM50-204ENST00000493161 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
SAMM50-204ENST00000493161 WDR33Q9C0J8 1336 aaKnown RBP18.14■□□□□ 0.49
SAMM50-204ENST00000493161 IBTKQ9P2D0 1353 aaPredicted RBP18.14■□□□□ 0.49
SAMM50-204ENST00000493161 GIGYF2Q6Y7W6 1299 aaKnown RBP18.13■□□□□ 0.49
SAMM50-204ENST00000493161 RBM17Q96I25 401 aaKnown RBP18.13■□□□□ 0.49
SAMM50-204ENST00000493161 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
SAMM50-204ENST00000493161 TRAF5O00463 557 aa18.12■□□□□ 0.49
SAMM50-204ENST00000493161 HSPA8P11142 646 aaKnown RBP18.12■□□□□ 0.49
SAMM50-204ENST00000493161 PDIA6Q15084 440 aa18.12■□□□□ 0.49
SAMM50-204ENST00000493161 LRP10Q7Z4F1 713 aa18.12■□□□□ 0.49
SAMM50-204ENST00000493161 ANXA1P04083 346 aa18.11■□□□□ 0.49
SAMM50-204ENST00000493161 NEFMP07197 916 aa18.11■□□□□ 0.49
SAMM50-204ENST00000493161 LMOD1P29536 600 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-204ENST00000493161 AOC3Q16853 763 aa18.11■□□□□ 0.49
SAMM50-204ENST00000493161 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
SAMM50-204ENST00000493161 CST9Q5W186 159 aa18.1■□□□□ 0.49
SAMM50-204ENST00000493161 PPIP5K2O43314 1243 aa18.09■□□□□ 0.49
SAMM50-204ENST00000493161 EIF2S2P20042 333 aaKnown RBP18.09■□□□□ 0.49
SAMM50-204ENST00000493161 NIM1KQ8IY84 436 aa18.09■□□□□ 0.49
SAMM50-204ENST00000493161 GRM1Q13255 1194 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 GRIPAP1Q4V328 841 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 CYP4F22Q6NT55 531 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 USP50Q70EL3 339 aaPredicted RBP18.08■□□□□ 0.48
SAMM50-204ENST00000493161 PPP1R42Q7Z4L9 355 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 CAPNS2Q96L46 248 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 NLRP3Q96P20 1036 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.48
SAMM50-204ENST00000493161 ABCC4O15439 1325 aa18.07■□□□□ 0.48
SAMM50-204ENST00000493161 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
SAMM50-204ENST00000493161 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
SAMM50-204ENST00000493161 CXCL9Q07325 125 aa18.07■□□□□ 0.48
SAMM50-204ENST00000493161 PARP10Q53GL7 1025 aa18.07■□□□□ 0.48
SAMM50-204ENST00000493161 SLC10A5Q5PT55 438 aa18.07■□□□□ 0.48
SAMM50-204ENST00000493161 PAXIP1Q6ZW49 1069 aaPredicted RBP18.07■□□□□ 0.48
SAMM50-204ENST00000493161 UTP14AQ9BVJ6 771 aaKnown RBP18.07■□□□□ 0.48
SAMM50-204ENST00000493161 NECTIN2Q92692 538 aa18.06■□□□□ 0.48
SAMM50-204ENST00000493161 ZNF428Q96B54 188 aa18.06■□□□□ 0.48
SAMM50-204ENST00000493161 GPRC5DQ9NZD1 345 aa18.06■□□□□ 0.48
SAMM50-204ENST00000493161 THSD7BQ9C0I4 1608 aa18.05■□□□□ 0.48
SAMM50-204ENST00000493161 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
SAMM50-204ENST00000493161 HCLS1P14317 486 aaPredicted RBP18.05■□□□□ 0.48
SAMM50-204ENST00000493161 ABHD8Q96I13 439 aa18.05■□□□□ 0.48
SAMM50-204ENST00000493161 RTFDC1Q9BY42 306 aaPredicted RBP18.05■□□□□ 0.48
SAMM50-204ENST00000493161 ZNRF3Q9ULT6 936 aa18.05■□□□□ 0.48
SAMM50-204ENST00000493161 AOC2O75106 756 aa18.04■□□□□ 0.48
SAMM50-204ENST00000493161 GMPSP49915 693 aaPredicted RBP18.04■□□□□ 0.48
SAMM50-204ENST00000493161 GPR101Q96P66 508 aaPredicted RBP18.04■□□□□ 0.48
SAMM50-204ENST00000493161 ADARB2Q9NS39 739 aaKnown RBP18.04■□□□□ 0.48
SAMM50-204ENST00000493161 TSKSQ9UJT2 592 aa18.04■□□□□ 0.48
SAMM50-204ENST00000493161 TLL2Q9Y6L7 1015 aa18.04■□□□□ 0.48
SAMM50-204ENST00000493161 LAMB2P55268 1798 aa18.04■□□□□ 0.48
SAMM50-204ENST00000493161 RIPK4P57078 832 aa18.03■□□□□ 0.48
SAMM50-204ENST00000493161 AIMP1Q12904 312 aaKnown RBP18.03■□□□□ 0.48
SAMM50-204ENST00000493161 COPS6Q7L5N1 327 aa18.03■□□□□ 0.48
SAMM50-204ENST00000493161 NLRP10Q86W26 655 aa18.03■□□□□ 0.48
SAMM50-204ENST00000493161 GLIS2Q9BZE0 524 aaPredicted RBP18.03■□□□□ 0.48
SAMM50-204ENST00000493161 TRPM7Q96QT4 1865 aa18.03■□□□□ 0.48
SAMM50-204ENST00000493161 SHTN1A0MZ66 631 aa18.02■□□□□ 0.48
SAMM50-204ENST00000493161 RAD17O75943 681 aa18.02■□□□□ 0.48
SAMM50-204ENST00000493161 HIRAP54198 1017 aaPredicted RBP18.02■□□□□ 0.48
SAMM50-204ENST00000493161 KRT24Q2M2I5 525 aa18.02■□□□□ 0.48
SAMM50-204ENST00000493161 DPP8Q6V1X1 898 aaPredicted RBP18.02■□□□□ 0.48
SAMM50-204ENST00000493161 SP8Q8IXZ3 490 aa18.02■□□□□ 0.48
SAMM50-204ENST00000493161 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.48
SAMM50-204ENST00000493161 VPS33BQ9H267 617 aa18.02■□□□□ 0.48
SAMM50-204ENST00000493161 BBOX1O75936 387 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms