RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ZNF837Q96EG3 531 aaPredicted RBP7.24□□□□□ -1.25
RTN4-215ENST00000491592 NUCKS1Q9H1E3 243 aaKnown RBP7.24□□□□□ -1.25
RTN4-215ENST00000491592 BCS1LQ9Y276 419 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 GJA3Q9Y6H8 435 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 HSP90B1P14625 803 aaKnown RBP7.23□□□□□ -1.25
RTN4-215ENST00000491592 BRD2P25440 801 aaKnown RBP7.23□□□□□ -1.25
RTN4-215ENST00000491592 GAS6Q14393 721 aa7.23□□□□□ -1.25
RTN4-215ENST00000491592 FAM26DQ5JW98 314 aa7.23□□□□□ -1.25
RTN4-215ENST00000491592 IER5Q5VY09 327 aa7.23□□□□□ -1.25
RTN4-215ENST00000491592 NLRP8Q86W28 1048 aa7.23□□□□□ -1.25
RTN4-215ENST00000491592 ETFBKMTQ8IXQ9 262 aa7.23□□□□□ -1.25
RTN4-215ENST00000491592 STIM2Q9P246 746 aa7.23□□□□□ -1.25
RTN4-215ENST00000491592 FKBP4Q02790 459 aaKnown RBP eCLIP7.22□□□□□ -1.25
RTN4-215ENST00000491592 SND1Q7KZF4 910 aaKnown RBP eCLIP7.22□□□□□ -1.252e-13■■■■□ 23
RTN4-215ENST00000491592 BEND7Q8N7W2 519 aaPredicted RBP7.22□□□□□ -1.25
RTN4-215ENST00000491592 IFT43Q96FT9 208 aa7.22□□□□□ -1.25
RTN4-215ENST00000491592 NEUROD4Q9HD90 331 aa7.22□□□□□ -1.25
RTN4-215ENST00000491592 ANKIB1Q9P2G1 1089 aa7.22□□□□□ -1.25
RTN4-215ENST00000491592 FAM13AO94988 1023 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 NPR3P17342 541 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 TYRO3Q06418 890 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 DBN1Q16643 649 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 SAMD5Q5TGI4 173 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 FIGNL1Q6PIW4 674 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 PODNQ7Z5L7 613 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.26
RTN4-215ENST00000491592 GZF1Q9H116 711 aaPredicted RBP7.21□□□□□ -1.26
RTN4-215ENST00000491592 IGF1RP08069 1367 aa7.2□□□□□ -1.26
RTN4-215ENST00000491592 FAM157BP0CG42 384 aa7.2□□□□□ -1.26
RTN4-215ENST00000491592 BCRP11274 1271 aa7.2□□□□□ -1.26
RTN4-215ENST00000491592 IDH3AP50213 366 aa7.2□□□□□ -1.26
RTN4-215ENST00000491592 UBAP2LQ14157 1087 aaKnown RBP7.2□□□□□ -1.26
RTN4-215ENST00000491592 BTLAQ7Z6A9 289 aa7.2□□□□□ -1.26
RTN4-215ENST00000491592 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
RTN4-215ENST00000491592 LRRC4BQ9NT99 713 aa7.2□□□□□ -1.26
RTN4-215ENST00000491592 BIN2Q9UBW5 565 aaPredicted RBP7.2□□□□□ -1.26
RTN4-215ENST00000491592 NSFL1CQ9UNZ2 370 aaKnown RBP7.2□□□□□ -1.26
RTN4-215ENST00000491592 DCDC2BA2VCK2 349 aa7.19□□□□□ -1.26
RTN4-215ENST00000491592 ATXN7O15265 892 aaPredicted RBP7.19□□□□□ -1.26
RTN4-215ENST00000491592 ZAP70P43403 619 aa7.19□□□□□ -1.26
RTN4-215ENST00000491592 EIF1AXP47813 144 aaKnown RBP7.19□□□□□ -1.26
RTN4-215ENST00000491592 NOM1Q5C9Z4 860 aaKnown RBP7.19□□□□□ -1.26
RTN4-215ENST00000491592 DMGDHQ9UI17 866 aaKnown RBP7.19□□□□□ -1.26
RTN4-215ENST00000491592 GPR25O00155 361 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 MSTNO14793 375 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 ZBTB39O15060 712 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 MICAL2O94851 1124 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 ARSDP51689 593 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 ARHGAP4P98171 946 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 ECM1Q16610 540 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 ATCAYQ86WG3 371 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 GTPBP3Q969Y2 492 aaKnown RBP7.18□□□□□ -1.26
RTN4-215ENST00000491592 CEP63Q96MT8 703 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 ZCCHC2Q9C0B9 1178 aaKnown RBP7.18□□□□□ -1.26
RTN4-215ENST00000491592 BRD7Q9NPI1 651 aa7.18□□□□□ -1.26
RTN4-215ENST00000491592 KHNYNO15037 678 aaKnown RBP7.17□□□□□ -1.26
RTN4-215ENST00000491592 EFSO43281 561 aa7.17□□□□□ -1.26
RTN4-215ENST00000491592 ALKBH2Q6NS38 261 aa7.17□□□□□ -1.26
RTN4-215ENST00000491592 NDFIP2Q9NV92 336 aa7.17□□□□□ -1.26
RTN4-215ENST00000491592 PCDHGC4Q9Y5F7 938 aa7.17□□□□□ -1.26
RTN4-215ENST00000491592 CNTNAP5Q8WYK1 1306 aa7.17□□□□□ -1.26
RTN4-215ENST00000491592 BNIP3LO60238 219 aa7.16□□□□□ -1.26
RTN4-215ENST00000491592 EPB42P16452 691 aa7.16□□□□□ -1.26
RTN4-215ENST00000491592 MX2P20592 715 aa7.16□□□□□ -1.26
RTN4-215ENST00000491592 INPP5BP32019 993 aa7.16□□□□□ -1.26
RTN4-215ENST00000491592 PLA2G4EQ3MJ16 856 aa7.16□□□□□ -1.26
RTN4-215ENST00000491592 ABHD17AQ96GS6 310 aa7.16□□□□□ -1.26
RTN4-215ENST00000491592 DCAF5Q96JK2 942 aa7.16□□□□□ -1.26
RTN4-215ENST00000491592 ATXN7L1Q9ULK2 861 aaPredicted RBP7.16□□□□□ -1.26
RTN4-215ENST00000491592 FZD6O60353 706 aa7.15□□□□□ -1.26
RTN4-215ENST00000491592 MAPTP10636 758 aaKnown RBP7.15□□□□□ -1.26
RTN4-215ENST00000491592 GRNP28799 593 aaKnown RBP7.15□□□□□ -1.26
RTN4-215ENST00000491592 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
RTN4-215ENST00000491592 GPR152Q8TDT2 470 aa7.15□□□□□ -1.26
RTN4-215ENST00000491592 EDEM1Q92611 657 aa7.15□□□□□ -1.26
RTN4-215ENST00000491592 FAM13BQ9NYF5 915 aa7.15□□□□□ -1.26
RTN4-215ENST00000491592 NDUFB5O43674 189 aa7.14□□□□□ -1.27
RTN4-215ENST00000491592 PDGFAP04085 211 aa7.14□□□□□ -1.27
RTN4-215ENST00000491592 DNM1Q05193 864 aaKnown RBP7.14□□□□□ -1.27
RTN4-215ENST00000491592 TNP2Q05952 138 aa7.14□□□□□ -1.27
RTN4-215ENST00000491592 AAMPQ13685 434 aa7.14□□□□□ -1.27
RTN4-215ENST00000491592 RGL4Q8IZJ4 473 aa7.14□□□□□ -1.27
RTN4-215ENST00000491592 ACDQ96AP0 544 aa7.14□□□□□ -1.27
RTN4-215ENST00000491592 PHF24Q9UPV7 400 aa7.14□□□□□ -1.27
RTN4-215ENST00000491592 RTCBQ9Y3I0 505 aaKnown RBP7.14□□□□□ -1.27
RTN4-215ENST00000491592 OPLAHO14841 1288 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 CD33P20138 364 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 FGFR3P22607 806 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 MAPK1P28482 360 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 MZF1P28698 734 aaPredicted RBP7.13□□□□□ -1.27
RTN4-215ENST00000491592 MAP2K3P46734 347 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 KCNQ4P56696 695 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 LAMC2Q13753 1193 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 TRIP4Q15650 581 aaPredicted RBP7.13□□□□□ -1.27
RTN4-215ENST00000491592 CCDC27Q2M243 656 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 NUDT16Q96DE0 195 aaKnown RBP7.13□□□□□ -1.27
RTN4-215ENST00000491592 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 STRN4Q9NRL3 753 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 CCDC87Q9NVE4 849 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms