RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 ANKRD7Q92527 254 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 ZCCHC17Q9NP64 241 aaKnown RBP13.42□□□□□ -0.26
PCSK9-202ENST00000490692 IFNKQ9P0W0 207 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 SNX14Q9Y5W7 946 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 RAD50Q92878 1312 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 USP27XA6NNY8 438 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 EIF3JO75822 258 aaKnown RBP13.42□□□□□ -0.26
PCSK9-202ENST00000490692 SLFN14P0C7P3 912 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 JAKMIP3Q5VZ66 844 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 G2E3Q7L622 706 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 MNAT1P51948 309 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 AIMP1Q12904 312 aaKnown RBP13.41□□□□□ -0.26
PCSK9-202ENST00000490692 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 BOLA2Q9H3K6 86 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 CENPHQ9H3R5 247 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 TET3O43151 1660 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 MADDQ8WXG6 1647 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 A0A0G2JS52 829 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 NR1I2O75469 434 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 TTC31Q49AM3 519 aaPredicted RBP13.41□□□□□ -0.26
PCSK9-202ENST00000490692 HDGFL1Q5TGJ6 251 aa13.41□□□□□ -0.26
PCSK9-202ENST00000490692 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
PCSK9-202ENST00000490692 WAPLQ7Z5K2 1190 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 CPLX3Q8WVH0 158 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
PCSK9-202ENST00000490692 CUL4AQ13619 759 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 RABEP2Q9H5N1 569 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 TOP1P11387 765 aaKnown RBP13.4□□□□□ -0.26
PCSK9-202ENST00000490692 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 PPP1R42Q7Z4L9 355 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 CCDC12Q8WUD4 166 aaPredicted RBP13.4□□□□□ -0.26
PCSK9-202ENST00000490692 BRF1Q92994 677 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 CCDC8Q9H0W5 538 aaPredicted RBP13.4□□□□□ -0.26
PCSK9-202ENST00000490692 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
PCSK9-202ENST00000490692 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 ERLIN1O75477 346 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 RAD51AP2Q09MP3 1159 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 MTMR6Q9Y217 621 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 ARAP3Q8WWN8 1544 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 KIF4BQ2VIQ3 1234 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 MICALL1Q8N3F8 863 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 UTP14AQ9BVJ6 771 aaKnown RBP13.39□□□□□ -0.27
PCSK9-202ENST00000490692 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
PCSK9-202ENST00000490692 KARSQ15046 597 aaKnown RBP13.39□□□□□ -0.27
PCSK9-202ENST00000490692 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 SLC52A1Q9NWF4 448 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
PCSK9-202ENST00000490692 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
PCSK9-202ENST00000490692 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
PCSK9-202ENST00000490692 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
PCSK9-202ENST00000490692 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
PCSK9-202ENST00000490692 TPM1P09493 284 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 RDXP35241 583 aaKnown RBP13.38□□□□□ -0.27
PCSK9-202ENST00000490692 FLIIQ13045 1269 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
PCSK9-202ENST00000490692 MORC2Q9Y6X9 1032 aaPredicted RBP13.38□□□□□ -0.27
PCSK9-202ENST00000490692 RPGRIP1LQ68CZ1 1315 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 LARGE1O95461 756 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 CLCN6P51797 869 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 SMC1AQ14683 1233 aaKnown RBP13.38□□□□□ -0.27
PCSK9-202ENST00000490692 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 BANK1Q8NDB2 785 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 ABCC4O15439 1325 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 ERVK-7P63135 1459 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 CEP152O94986 1710 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 AP5Z1O43299 807 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 NUTM2GQ5VZR2 741 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 RHPN1Q8TCX5 695 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
PCSK9-202ENST00000490692 KIDINS220Q9ULH0 1771 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 ZSCAN12O43309 604 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 E2F4Q16254 413 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 LEO1Q8WVC0 666 aaPredicted RBP13.37□□□□□ -0.27
PCSK9-202ENST00000490692 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
PCSK9-202ENST00000490692 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 TRIM66O15016 1216 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 CAGE1Q8TC20 777 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 DNAAF4Q8WXU2 420 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCSK9-202ENST00000490692 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
PCSK9-202ENST00000490692 EFCAB6Q5THR3 1501 aa13.36□□□□□ -0.27
PCSK9-202ENST00000490692 ANXA1P04083 346 aa13.36□□□□□ -0.27
PCSK9-202ENST00000490692 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.36□□□□□ -0.27
PCSK9-202ENST00000490692 SLC3A2P08195 630 aaKnown RBP13.36□□□□□ -0.27
PCSK9-202ENST00000490692 RHOXF2BP0C7M4 288 aa13.36□□□□□ -0.27
PCSK9-202ENST00000490692 ZNF622Q969S3 477 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms