RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 EPB42P16452 691 aa6.93□□□□□ -1.3
NF1-213ENST00000489712 ELOA3BQ3SY89 546 aa6.93□□□□□ -1.3
NF1-213ENST00000489712 ELOA3Q8NG57 546 aa6.93□□□□□ -1.3
NF1-213ENST00000489712 PBXIP1Q96AQ6 731 aa6.93□□□□□ -1.3
NF1-213ENST00000489712 DCAF5Q96JK2 942 aa6.93□□□□□ -1.3
NF1-213ENST00000489712 QTRT2Q9H974 415 aaKnown RBP6.93□□□□□ -1.3
NF1-213ENST00000489712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.93□□□□□ -1.32e-8■■■■■ 64.1
NF1-213ENST00000489712 ARID3CA6NKF2 412 aa6.92□□□□□ -1.3
NF1-213ENST00000489712 HOXB4P17483 251 aaPredicted RBP6.92□□□□□ -1.3
NF1-213ENST00000489712 ALAS2P22557 587 aa6.92□□□□□ -1.3
NF1-213ENST00000489712 DGKZQ13574 1117 aa6.92□□□□□ -1.3
NF1-213ENST00000489712 RAB44Q7Z6P3 723 aaPredicted RBP6.92□□□□□ -1.3
NF1-213ENST00000489712 ALYREFQ86V81 257 aaKnown RBP6.92□□□□□ -1.3
NF1-213ENST00000489712 TNFRSF25Q93038 417 aa6.92□□□□□ -1.3
NF1-213ENST00000489712 MYO19Q96H55 970 aa6.92□□□□□ -1.3
NF1-213ENST00000489712 KLK14Q9P0G3 267 aa6.92□□□□□ -1.3
NF1-213ENST00000489712 ADARB2-AS1A8MUL3 147 aa6.91□□□□□ -1.3
NF1-213ENST00000489712 PRMT3O60678 531 aa6.91□□□□□ -1.3
NF1-213ENST00000489712 SRPK2P78362 688 aaKnown RBP6.91□□□□□ -1.3
NF1-213ENST00000489712 FKBP5Q13451 457 aaPredicted RBP6.91□□□□□ -1.3
NF1-213ENST00000489712 NOP53Q9NZM5 478 aaKnown RBP6.91□□□□□ -1.3
NF1-213ENST00000489712 IGHA1P01876 353 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 ADH7P40394 386 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 IDH3AP50213 366 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 TMEM164Q5U3C3 297 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 GPAT2Q6NUI2 795 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 LINC00114Q6XXX2 140 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 BHMTQ93088 406 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 PRIMPOLQ96LW4 560 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 MDFIQ99750 246 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 EFCC1Q9HA90 598 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 BCS1LQ9Y276 419 aa6.9□□□□□ -1.3
NF1-213ENST00000489712 ARSDP51689 593 aa6.89□□□□□ -1.31
NF1-213ENST00000489712 FAM69CQ0P6D2 419 aa6.89□□□□□ -1.31
NF1-213ENST00000489712 OCLNQ16625 522 aa6.89□□□□□ -1.31
NF1-213ENST00000489712 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
NF1-213ENST00000489712 C14orf37Q86TY3 774 aa6.89□□□□□ -1.31
NF1-213ENST00000489712 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
NF1-213ENST00000489712 DMGDHQ9UI17 866 aaKnown RBP6.89□□□□□ -1.31
NF1-213ENST00000489712 COL8A1P27658 744 aa6.88□□□□□ -1.31
NF1-213ENST00000489712 PLA2G4EQ3MJ16 856 aa6.88□□□□□ -1.31
NF1-213ENST00000489712 CCDC82Q8N4S0 544 aa6.88□□□□□ -1.31
NF1-213ENST00000489712 SUV39H2Q9H5I1 410 aa6.88□□□□□ -1.31
NF1-213ENST00000489712 CXXC1Q9P0U4 656 aaPredicted RBP6.88□□□□□ -1.31
NF1-213ENST00000489712 NFKB1P19838 968 aa6.87□□□□□ -1.31
NF1-213ENST00000489712 INPP5BP32019 993 aa6.87□□□□□ -1.31
NF1-213ENST00000489712 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
NF1-213ENST00000489712 CLP1Q92989 425 aaKnown RBP6.87□□□□□ -1.31
NF1-213ENST00000489712 UBE2OQ9C0C9 1292 aaKnown RBP6.87□□□□□ -1.31
NF1-213ENST00000489712 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.87□□□□□ -1.31
NF1-213ENST00000489712 MICAL2O94851 1124 aa6.86□□□□□ -1.31
NF1-213ENST00000489712 CCINQ13939 588 aa6.86□□□□□ -1.31
NF1-213ENST00000489712 COL26A1Q96A83 441 aa6.86□□□□□ -1.31
NF1-213ENST00000489712 GSX2Q9BZM3 304 aa6.86□□□□□ -1.31
NF1-213ENST00000489712 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
NF1-213ENST00000489712 SPDYE3A6NKU9 549 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 M0R082 166 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 PTCD1O75127 700 aaKnown RBP6.85□□□□□ -1.31
NF1-213ENST00000489712 ALBP02768 609 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 COX20Q5RI15 118 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 C16orf46Q6P387 395 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 ZNF417Q8TAU3 575 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 TRIM11Q96F44 468 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 IFT43Q96FT9 208 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 ZNF587Q96SQ5 575 aaPredicted RBP6.85□□□□□ -1.31
NF1-213ENST00000489712 MKNK1Q9BUB5 465 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 C11orf16Q9NQ32 467 aa6.85□□□□□ -1.31
NF1-213ENST00000489712 KRBA1A5PL33 1030 aa6.84□□□□□ -1.31
NF1-213ENST00000489712 MSTNO14793 375 aa6.84□□□□□ -1.31
NF1-213ENST00000489712 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
NF1-213ENST00000489712 TREML1Q86YW5 311 aa6.84□□□□□ -1.31
NF1-213ENST00000489712 IGFLR1Q9H665 355 aa6.84□□□□□ -1.31
NF1-213ENST00000489712 PRDM6Q9NQX0 595 aa6.84□□□□□ -1.31
NF1-213ENST00000489712 SLC6A14Q9UN76 642 aa6.84□□□□□ -1.31
NF1-213ENST00000489712 ATP2B4P23634 1241 aa6.83□□□□□ -1.32
NF1-213ENST00000489712 SPOCK3Q9BQ16 436 aa6.83□□□□□ -1.32
NF1-213ENST00000489712 PLVAPQ9BX97 442 aa6.83□□□□□ -1.32
NF1-213ENST00000489712 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
NF1-213ENST00000489712 STARD13Q9Y3M8 1113 aa6.83□□□□□ -1.32
NF1-213ENST00000489712 MAP3K6O95382 1288 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 ITGB2P05107 769 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 SPATA31C1P0DKV0 1188 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 BRD2P25440 801 aaKnown RBP6.82□□□□□ -1.32
NF1-213ENST00000489712 PCSK7Q16549 785 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 KRT25Q7Z3Z0 450 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 RGL4Q8IZJ4 473 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 MICALL1Q8N3F8 863 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 SAP130Q9H0E3 1048 aa6.82□□□□□ -1.32
NF1-213ENST00000489712 RTCBQ9Y3I0 505 aaKnown RBP6.82□□□□□ -1.32
NF1-213ENST00000489712 OPLAHO14841 1288 aa6.81□□□□□ -1.32
NF1-213ENST00000489712 LILRB5O75023 590 aa6.81□□□□□ -1.32
NF1-213ENST00000489712 PPP1R15AO75807 674 aaPredicted RBP6.81□□□□□ -1.32
NF1-213ENST00000489712 RARAP10276 462 aa6.81□□□□□ -1.32
NF1-213ENST00000489712 ARID4AP29374 1257 aaPredicted RBP6.81□□□□□ -1.32
NF1-213ENST00000489712 ETFBKMTQ8IXQ9 262 aa6.81□□□□□ -1.32
NF1-213ENST00000489712 C1orf115Q9H7X2 142 aa6.81□□□□□ -1.32
NF1-213ENST00000489712 XYLBO75191 536 aa6.8□□□□□ -1.32
NF1-213ENST00000489712 PROCP04070 461 aa6.8□□□□□ -1.32
NF1-213ENST00000489712 NID1P14543 1247 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms