RNA–Protein interactions for RNA: ENST00000485112.1

CLASP1-213, Transcript of cytoplasmic linker associated protein 1, human

TSL 5

Gene CLASP1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP1-213	ENST00000485112	ERFE	Q4G0M1	354 aa		29.07	■■■□□ 2.24
CLASP1-213	ENST00000485112	TRMT112	Q9UI30	125 aa	Known RBP	29.07	■■■□□ 2.24
CLASP1-213	ENST00000485112	MRPL50	Q8N5N7	158 aa	Known RBP	29.06	■■■□□ 2.24
CLASP1-213	ENST00000485112	CCDC191	Q8NCU4	936 aa		29.06	■■■□□ 2.24
CLASP1-213	ENST00000485112	SSH1	Q8WYL5	1049 aa		29.06	■■■□□ 2.24
CLASP1-213	ENST00000485112	RIC1	Q4ADV7	1423 aa		29.05	■■■□□ 2.24
CLASP1-213	ENST00000485112	SH3TC1	Q8TE82	1336 aa		29.05	■■■□□ 2.24
CLASP1-213	ENST00000485112	KLRG2	A4D1S0	409 aa	Predicted RBP	29.05	■■■□□ 2.24
CLASP1-213	ENST00000485112	GRIN3B	O60391	1043 aa		29.05	■■■□□ 2.24
CLASP1-213	ENST00000485112	DNAAF4	Q8WXU2	420 aa		29.05	■■■□□ 2.24
CLASP1-213	ENST00000485112	ANKRD36C	Q5JPF3	1778 aa		29.05	■■■□□ 2.24
CLASP1-213	ENST00000485112	ARFGEF2	Q9Y6D5	1785 aa		29.05	■■■□□ 2.24
CLASP1-213	ENST00000485112	KIAA1551	Q9HCM1	1747 aa		29.04	■■■□□ 2.24
CLASP1-213	ENST00000485112	SLC10A5	Q5PT55	438 aa		29.04	■■■□□ 2.24
CLASP1-213	ENST00000485112	ABCC12	Q96J65	1359 aa		29.03	■■■□□ 2.24
CLASP1-213	ENST00000485112	DALRD3	Q5D0E6	543 aa	Known RBP	29.03	■■■□□ 2.24
CLASP1-213	ENST00000485112	SMC4	Q9NTJ3	1288 aa		29.03	■■■□□ 2.24
CLASP1-213	ENST00000485112	CWC25	Q9NXE8	425 aa	Predicted RBP	29.03	■■■□□ 2.24
CLASP1-213	ENST00000485112	PTPRC	P08575	1304 aa		29.02	■■■□□ 2.24
CLASP1-213	ENST00000485112	SRGN	P10124	158 aa		29.02	■■■□□ 2.24
CLASP1-213	ENST00000485112	STYK1	Q6J9G0	422 aa		29.02	■■■□□ 2.24
CLASP1-213	ENST00000485112	MASTL	Q96GX5	879 aa		29.02	■■■□□ 2.24
CLASP1-213	ENST00000485112	BCS1L	Q9Y276	419 aa		29.02	■■■□□ 2.24
CLASP1-213	ENST00000485112	YBX3	P16989	372 aa	Known RBP eCLIP	29.01	■■■□□ 2.23
CLASP1-213	ENST00000485112	ZNF622	Q969S3	477 aa	Known RBP eCLIP	29.01	■■■□□ 2.23
CLASP1-213	ENST00000485112	NLRP3	Q96P20	1036 aa		29.01	■■■□□ 2.23
CLASP1-213	ENST00000485112	N4BP2	Q86UW6	1770 aa	Predicted RBP	29.01	■■■□□ 2.23
CLASP1-213	ENST00000485112	HSP90B1	P14625	803 aa	Known RBP	29	■■■□□ 2.23
CLASP1-213	ENST00000485112	NPR1	P16066	1061 aa		29	■■■□□ 2.23
CLASP1-213	ENST00000485112	TTLL6	Q8N841	843 aa		29	■■■□□ 2.23
CLASP1-213	ENST00000485112	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	29	■■■□□ 2.23
CLASP1-213	ENST00000485112	CNKSR1	Q969H4	720 aa		29	■■■□□ 2.23
CLASP1-213	ENST00000485112	WWC3	Q9ULE0	1092 aa		29	■■■□□ 2.23
CLASP1-213	ENST00000485112	IGKV5-2	P06315	115 aa		28.99	■■■□□ 2.23
CLASP1-213	ENST00000485112	RARS	P54136	660 aa	Known RBP	28.99	■■■□□ 2.23
CLASP1-213	ENST00000485112	BRPF1	P55201	1214 aa	Predicted RBP	28.99	■■■□□ 2.23
CLASP1-213	ENST00000485112	LINS1	Q8NG48	757 aa		28.99	■■■□□ 2.23
CLASP1-213	ENST00000485112	BCL2L13	Q9BXK5	485 aa		28.99	■■■□□ 2.23
CLASP1-213	ENST00000485112	ANKRD31	Q8N7Z5	1873 aa		28.99	■■■□□ 2.23
CLASP1-213	ENST00000485112	CRY2	Q49AN0	593 aa		28.98	■■■□□ 2.23
CLASP1-213	ENST00000485112	NEURL1B	A8MQ27	555 aa		28.97	■■■□□ 2.23
CLASP1-213	ENST00000485112	PCCA	P05165	728 aa	Predicted RBP	28.97	■■■□□ 2.23
CLASP1-213	ENST00000485112	FAM89A	Q96GI7	184 aa		28.97	■■■□□ 2.23
CLASP1-213	ENST00000485112		F6X3S4	739 aa		28.96	■■■□□ 2.23
CLASP1-213	ENST00000485112	RPGR	Q92834	1020 aa	Known RBP	28.96	■■■□□ 2.23
CLASP1-213	ENST00000485112	ALDH1B1	P30837	517 aa		28.95	■■■□□ 2.22
CLASP1-213	ENST00000485112	CWF19L2	Q2TBE0	894 aa	Known RBP	28.95	■■■□□ 2.22
CLASP1-213	ENST00000485112	IRS4	O14654	1257 aa	Predicted RBP	28.94	■■■□□ 2.22
CLASP1-213	ENST00000485112	HCLS1	P14317	486 aa	Predicted RBP	28.94	■■■□□ 2.22
CLASP1-213	ENST00000485112	SYNE4	Q8N205	404 aa		28.94	■■■□□ 2.22
CLASP1-213	ENST00000485112	BEND3	Q5T5X7	828 aa		28.93	■■■□□ 2.22
CLASP1-213	ENST00000485112	RBM17	Q96I25	401 aa	Known RBP	28.93	■■■□□ 2.22
CLASP1-213	ENST00000485112	KIF16B	Q96L93	1317 aa		28.93	■■■□□ 2.22
CLASP1-213	ENST00000485112	HOXA10	P31260	410 aa	Predicted RBP	28.92	■■■□□ 2.22
CLASP1-213	ENST00000485112	GCKR	Q14397	625 aa		28.92	■■■□□ 2.22
CLASP1-213	ENST00000485112	SLC4A10	Q6U841	1118 aa		28.92	■■■□□ 2.22
CLASP1-213	ENST00000485112	DLEC1	Q9Y238	1755 aa		28.92	■■■□□ 2.22
CLASP1-213	ENST00000485112	ALDH1L1	O75891	902 aa		28.91	■■■□□ 2.22
CLASP1-213	ENST00000485112	RTL5	Q5HYW3	569 aa	Predicted RBP	28.91	■■■□□ 2.22
CLASP1-213	ENST00000485112	BRCA1	P38398	1863 aa	Known RBP	28.91	■■■□□ 2.22
CLASP1-213	ENST00000485112	CDHR2	Q9BYE9	1310 aa		28.91	■■■□□ 2.22
CLASP1-213	ENST00000485112	PRPF40B	Q6NWY9	871 aa	Known RBP	28.9	■■■□□ 2.22
CLASP1-213	ENST00000485112	CRAMP1	Q96RY5	1269 aa		28.9	■■■□□ 2.22
CLASP1-213	ENST00000485112	API5	Q9BZZ5	524 aa	Known RBP	28.9	■■■□□ 2.22
CLASP1-213	ENST00000485112	SRCIN1	Q9C0H9	1055 aa		28.9	■■■□□ 2.22
CLASP1-213	ENST00000485112	NOB1	Q9ULX3	412 aa	Known RBP	28.9	■■■□□ 2.22
CLASP1-213	ENST00000485112	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.89	■■■□□ 2.22
CLASP1-213	ENST00000485112	COL11A2	P13942	1736 aa	Predicted RBP	28.89	■■■□□ 2.22
CLASP1-213	ENST00000485112		H7C1W4	665 aa		28.89	■■■□□ 2.22
CLASP1-213	ENST00000485112	C3orf67	Q6ZVT6	689 aa		28.89	■■■□□ 2.22
CLASP1-213	ENST00000485112	IPO8	O15397	1037 aa	Known RBP	28.88	■■■□□ 2.21
CLASP1-213	ENST00000485112	SF3B3	Q15393	1217 aa	Known RBP	28.88	■■■□□ 2.21
CLASP1-213	ENST00000485112	ARHGAP45	Q92619	1136 aa		28.88	■■■□□ 2.21
CLASP1-213	ENST00000485112	PDE8A	O60658	829 aa		28.87	■■■□□ 2.21
CLASP1-213	ENST00000485112	SOGA3	Q5TF21	947 aa		28.87	■■■□□ 2.21
CLASP1-213	ENST00000485112	ARHGAP27	Q6ZUM4	889 aa		28.86	■■■□□ 2.21
CLASP1-213	ENST00000485112	DDX46	Q7L014	1031 aa	Known RBP	28.86	■■■□□ 2.21
CLASP1-213	ENST00000485112	UBE3B	Q7Z3V4	1068 aa		28.85	■■■□□ 2.21
CLASP1-213	ENST00000485112	JARID2	Q92833	1246 aa	Predicted RBP	28.84	■■■□□ 2.21
CLASP1-213	ENST00000485112	C21orf2	O43822	256 aa		28.83	■■■□□ 2.21
CLASP1-213	ENST00000485112	BCAR3	O75815	825 aa		28.83	■■■□□ 2.21
CLASP1-213	ENST00000485112	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.83	■■■□□ 2.21
CLASP1-213	ENST00000485112	ARFGEF1	Q9Y6D6	1849 aa		28.83	■■■□□ 2.21
CLASP1-213	ENST00000485112	GRM8	O00222	908 aa		28.82	■■■□□ 2.2
CLASP1-213	ENST00000485112	CCDC152	Q4G0S7	254 aa		28.82	■■■□□ 2.2
CLASP1-213	ENST00000485112	YTHDC1	Q96MU7	727 aa	Known RBP	28.82	■■■□□ 2.2
CLASP1-213	ENST00000485112	ABCC4	O15439	1325 aa		28.81	■■■□□ 2.2
CLASP1-213	ENST00000485112	BBOX1	O75936	387 aa		28.81	■■■□□ 2.2
CLASP1-213	ENST00000485112	CCT4	P50991	539 aa	Known RBP	28.81	■■■□□ 2.2
CLASP1-213	ENST00000485112	CASP7	P55210	303 aa		28.81	■■■□□ 2.2
CLASP1-213	ENST00000485112	C7orf43	Q8WVR3	580 aa		28.81	■■■□□ 2.2
CLASP1-213	ENST00000485112	PLA2G12B	Q9BX93	195 aa		28.81	■■■□□ 2.2
CLASP1-213	ENST00000485112	CTSW	P56202	376 aa		28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	GRAP	Q13588	217 aa		28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	CCDC93	Q567U6	631 aa		28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	CC2D2B	Q6DHV5	1058 aa		28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	GRAPL	Q8TC17	118 aa	Predicted RBP	28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	FRAT1	Q92837	279 aa	Predicted RBP	28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	TMX4	Q9H1E5	349 aa	Predicted RBP	28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.8	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms