RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 G2E3Q7L622 706 aa22.78■■□□□ 1.24
SREBF1-213ENST00000485080 CCDC24Q8N4L8 307 aa22.78■■□□□ 1.24
SREBF1-213ENST00000485080 METTL22Q9BUU2 404 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-213ENST00000485080 FAM177BA6PVY3 158 aa22.77■■□□□ 1.24
SREBF1-213ENST00000485080 ERFEQ4G0M1 354 aa22.77■■□□□ 1.24
SREBF1-213ENST00000485080 STYK1Q6J9G0 422 aa22.77■■□□□ 1.24
SREBF1-213ENST00000485080 ADCY9O60503 1353 aa22.76■■□□□ 1.23
SREBF1-213ENST00000485080 ABCC12Q96J65 1359 aa22.76■■□□□ 1.23
SREBF1-213ENST00000485080 PI4KAP2A4QPH2 592 aa22.76■■□□□ 1.23
SREBF1-213ENST00000485080 CRY2Q49AN0 593 aa22.76■■□□□ 1.23
SREBF1-213ENST00000485080 NUTM1Q86Y26 1132 aa22.76■■□□□ 1.23
SREBF1-213ENST00000485080 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
SREBF1-213ENST00000485080 TTLL6Q8N841 843 aa22.76■■□□□ 1.23
SREBF1-213ENST00000485080 PI4KAP1Q8N8J0 262 aa22.76■■□□□ 1.23
SREBF1-213ENST00000485080 ARFGEF1Q9Y6D6 1849 aa22.75■■□□□ 1.23
SREBF1-213ENST00000485080 CCDC191Q8NCU4 936 aa22.75■■□□□ 1.23
SREBF1-213ENST00000485080 MASTLQ96GX5 879 aa22.75■■□□□ 1.23
SREBF1-213ENST00000485080 BCS1LQ9Y276 419 aa22.75■■□□□ 1.23
SREBF1-213ENST00000485080 MAP3K2Q9Y2U5 619 aa22.75■■□□□ 1.23
SREBF1-213ENST00000485080 ZBED9Q6R2W3 1325 aa22.75■■□□□ 1.23
SREBF1-213ENST00000485080 COL11A2P13942 1736 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-213ENST00000485080 SH3TC1Q8TE82 1336 aa22.74■■□□□ 1.23
SREBF1-213ENST00000485080 ATP5J2-PTCD1G3V325 749 aa22.73■■□□□ 1.23
SREBF1-213ENST00000485080 NPR1P16066 1061 aa22.73■■□□□ 1.23
SREBF1-213ENST00000485080 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
SREBF1-213ENST00000485080 CNKSR1Q969H4 720 aa22.73■■□□□ 1.23
SREBF1-213ENST00000485080 TRMT112Q9UI30 125 aaKnown RBP22.73■■□□□ 1.23
SREBF1-213ENST00000485080 CHD4Q14839 1912 aa22.72■■□□□ 1.23
SREBF1-213ENST00000485080 HOXA10P31260 410 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-213ENST00000485080 FKBP5Q13451 457 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-213ENST00000485080 MYD88Q99836 296 aa22.72■■□□□ 1.23
SREBF1-213ENST00000485080 ZNF622Q969S3 477 aaKnown RBP eCLIP22.71■■□□□ 1.23
SREBF1-213ENST00000485080 IGKV5-2P06315 115 aa22.7■■□□□ 1.22
SREBF1-213ENST00000485080 NEXNQ0ZGT2 675 aa22.7■■□□□ 1.22
SREBF1-213ENST00000485080 MRPL50Q8N5N7 158 aaKnown RBP22.7■■□□□ 1.22
SREBF1-213ENST00000485080 ZBTB38Q8NAP3 1195 aaPredicted RBP22.7■■□□□ 1.22
SREBF1-213ENST00000485080 DNAAF4Q8WXU2 420 aa22.7■■□□□ 1.22
SREBF1-213ENST00000485080 NLRP3Q96P20 1036 aa22.7■■□□□ 1.22
SREBF1-213ENST00000485080 CWC25Q9NXE8 425 aaPredicted RBP22.7■■□□□ 1.22
SREBF1-213ENST00000485080 WWC3Q9ULE0 1092 aa22.7■■□□□ 1.22
SREBF1-213ENST00000485080 TNRC6CQ9HCJ0 1690 aaKnown RBP22.7■■□□□ 1.22
SREBF1-213ENST00000485080 BRPF1P55201 1214 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-213ENST00000485080 SSH1Q8WYL5 1049 aa22.69■■□□□ 1.22
SREBF1-213ENST00000485080 HSP90B1P14625 803 aaKnown RBP22.68■■□□□ 1.22
SREBF1-213ENST00000485080 ALDH1B1P30837 517 aa22.68■■□□□ 1.22
SREBF1-213ENST00000485080 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
SREBF1-213ENST00000485080 PCCAP05165 728 aaPredicted RBP22.67■■□□□ 1.22
SREBF1-213ENST00000485080 SYNE4Q8N205 404 aa22.67■■□□□ 1.22
SREBF1-213ENST00000485080 LINS1Q8NG48 757 aa22.67■■□□□ 1.22
SREBF1-213ENST00000485080 FAM89AQ96GI7 184 aa22.67■■□□□ 1.22
SREBF1-213ENST00000485080 CRAMP1Q96RY5 1269 aa22.67■■□□□ 1.22
SREBF1-213ENST00000485080 PTPRCP08575 1304 aa22.66■■□□□ 1.22
SREBF1-213ENST00000485080 PRPF40BQ6NWY9 871 aaKnown RBP22.66■■□□□ 1.22
SREBF1-213ENST00000485080 C3orf67Q6ZVT6 689 aa22.66■■□□□ 1.22
SREBF1-213ENST00000485080 C7orf43Q8WVR3 580 aa22.66■■□□□ 1.22
SREBF1-213ENST00000485080 HCLS1P14317 486 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-213ENST00000485080 SLX4Q8IY92 1834 aa22.65■■□□□ 1.22
SREBF1-213ENST00000485080 IRS4O14654 1257 aaPredicted RBP22.64■■□□□ 1.21
SREBF1-213ENST00000485080 SF3B3Q15393 1217 aaKnown RBP22.64■■□□□ 1.21
SREBF1-213ENST00000485080 SOGA3Q5TF21 947 aa22.64■■□□□ 1.21
SREBF1-213ENST00000485080 RPGRQ92834 1020 aaKnown RBP22.64■■□□□ 1.21
SREBF1-213ENST00000485080 CDHR2Q9BYE9 1310 aa22.63■■□□□ 1.21
SREBF1-213ENST00000485080 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
SREBF1-213ENST00000485080 ARHGAP27Q6ZUM4 889 aa22.63■■□□□ 1.21
SREBF1-213ENST00000485080 RBM17Q96I25 401 aaKnown RBP22.63■■□□□ 1.21
SREBF1-213ENST00000485080 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
SREBF1-213ENST00000485080 F6X3S4 739 aa22.62■■□□□ 1.21
SREBF1-213ENST00000485080 H7C1W4 665 aa22.62■■□□□ 1.21
SREBF1-213ENST00000485080 RARSP54136 660 aaKnown RBP22.62■■□□□ 1.21
SREBF1-213ENST00000485080 GCKRQ14397 625 aa22.62■■□□□ 1.21
SREBF1-213ENST00000485080 CWF19L2Q2TBE0 894 aaKnown RBP22.62■■□□□ 1.21
SREBF1-213ENST00000485080 LAMB2P55268 1798 aa22.61■■□□□ 1.21
SREBF1-213ENST00000485080 SMC4Q9NTJ3 1288 aa22.61■■□□□ 1.21
SREBF1-213ENST00000485080 C21orf2O43822 256 aa22.6■■□□□ 1.21
SREBF1-213ENST00000485080 YY1P25490 414 aa22.6■■□□□ 1.21
SREBF1-213ENST00000485080 CC2D2BQ6DHV5 1058 aa22.6■■□□□ 1.21
SREBF1-213ENST00000485080 LTBP3Q9NS15 1303 aa22.59■■□□□ 1.21
SREBF1-213ENST00000485080 PDE8AO60658 829 aa22.59■■□□□ 1.21
SREBF1-213ENST00000485080 ALDH1L1O75891 902 aa22.59■■□□□ 1.21
SREBF1-213ENST00000485080 BBOX1O75936 387 aa22.58■■□□□ 1.21
SREBF1-213ENST00000485080 CASP7P55210 303 aa22.58■■□□□ 1.21
SREBF1-213ENST00000485080 GRIPAP1Q4V328 841 aa22.58■■□□□ 1.21
SREBF1-213ENST00000485080 DDX46Q7L014 1031 aaKnown RBP22.58■■□□□ 1.21
SREBF1-213ENST00000485080 PLA2G12BQ9BX93 195 aa22.58■■□□□ 1.21
SREBF1-213ENST00000485080 BCL2L13Q9BXK5 485 aa22.58■■□□□ 1.21
SREBF1-213ENST00000485080 FER1L6Q2WGJ9 1857 aa22.58■■□□□ 1.2
SREBF1-213ENST00000485080 ABCC4O15439 1325 aa22.57■■□□□ 1.2
SREBF1-213ENST00000485080 NFKBIEO00221 500 aa22.57■■□□□ 1.2
SREBF1-213ENST00000485080 CCDC93Q567U6 631 aa22.57■■□□□ 1.2
SREBF1-213ENST00000485080 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
SREBF1-213ENST00000485080 SNED1Q8TER0 1413 aa22.57■■□□□ 1.2
SREBF1-213ENST00000485080 CACNA1SQ13698 1873 aa22.56■■□□□ 1.2
SREBF1-213ENST00000485080 GRAPQ13588 217 aa22.56■■□□□ 1.2
SREBF1-213ENST00000485080 TMC4Q7Z404 712 aa22.56■■□□□ 1.2
SREBF1-213ENST00000485080 RTKN2Q8IZC4 609 aa22.56■■□□□ 1.2
SREBF1-213ENST00000485080 GRAPLQ8TC17 118 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-213ENST00000485080 ARHGAP45Q92619 1136 aa22.56■■□□□ 1.2
SREBF1-213ENST00000485080 SRCIN1Q9C0H9 1055 aa22.56■■□□□ 1.2
SREBF1-213ENST00000485080 UBE3BQ7Z3V4 1068 aa22.55■■□□□ 1.2
SREBF1-213ENST00000485080 SBF1O95248 1867 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms