RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, human

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRE-208	ENST00000483564	SPG7	Q9UQ90	795 aa		10.88	□□□□□ -0.67
GABRE-208	ENST00000483564	PLA2G4A	P47712	749 aa		10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	ST3GAL1	Q11201	340 aa		10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	COL9A3	Q14050	684 aa	Predicted RBP	10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	ZSCAN26	Q16670	478 aa		10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	FAM212A	Q96EL1	285 aa		10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	ERO1A	Q96HE7	468 aa		10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	CAST	P20810	708 aa	Known RBP	10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	MCM10	Q7L590	875 aa		10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	PUS7	Q96PZ0	661 aa	Known RBP	10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	ZCCHC17	Q9NP64	241 aa	Known RBP	10.87	□□□□□ -0.67
GABRE-208	ENST00000483564	SLU7	O95391	586 aa	Known RBP	10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	IL13	P35225	146 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	CLCN6	P51797	869 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	BMS1	Q14692	1282 aa	Known RBP	10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	ADCK5	Q3MIX3	580 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	MUM1L1	Q5H9M0	696 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	CDC37L1	Q7L3B6	337 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	EGFL6	Q8IUX8	553 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	SMARCE1	Q969G3	411 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	IL17RA	Q96F46	866 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	BRMS1	Q9HCU9	246 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	HYPK	Q9NX55	129 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	ZRANB1	Q9UGI0	708 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	NR1I2	O75469	434 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	TEX35	Q5T0J7	233 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	TXLNB	Q8N3L3	684 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	TDRD7	Q8NHU6	1098 aa	Known RBP	10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	KIAA0232	Q92628	1395 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	A2ML1	A8K2U0	1454 aa		10.86	□□□□□ -0.67
GABRE-208	ENST00000483564	TNR	Q92752	1358 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	H2AFX	P16104	143 aa	Predicted RBP	10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	HDGF	P51858	240 aa	Known RBP	10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	ME3	Q16798	604 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	CWC27	Q6UX04	472 aa	Known RBP	10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	SRL	Q86TD4	932 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	PACS2	Q86VP3	889 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	GOLGA6L1	Q8N7Z2	621 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	ATG3	Q9NT62	314 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	CCDC69	A6NI79	296 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	PNMA6A	P0CW24	399 aa	Predicted RBP	10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	TSGA10IP	Q3SY00	556 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	LARP1B	Q659C4	914 aa	Known RBP	10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	LSG1	Q9H089	658 aa	Known RBP	10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	RRP15	Q9Y3B9	282 aa	Known RBP	10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	FER1L4	A9Z1Z3	1794 aa		10.85	□□□□□ -0.67
GABRE-208	ENST00000483564	RIMS2	Q9UQ26	1411 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	CCZ1B	P86790	482 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	CCZ1	P86791	482 aa	Predicted RBP	10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	RRS1	Q15050	365 aa	Known RBP	10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	CCAR2	Q8N163	923 aa	Known RBP	10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	PTPRC	P08575	1304 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	GOLGA6L4	A6NEF3	574 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	SGSM2	O43147	1006 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	SEC31A	O94979	1220 aa	Known RBP	10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	GNAI2	P04899	355 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	KRT85	P78386	507 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	SLFNL1	Q499Z3	407 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	GORAB	Q5T7V8	394 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	PRAM1	Q96QH2	718 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	EPC1	Q9H2F5	836 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	CXorf56	Q9H5V9	222 aa		10.84	□□□□□ -0.67
GABRE-208	ENST00000483564	CCDC171	Q6TFL3	1326 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	TTC31	Q49AM3	519 aa	Predicted RBP	10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	ARHGAP29	Q52LW3	1261 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	DEF6	Q9H4E7	631 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	CD163L1	Q9NR16	1453 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	FBXW7	Q969H0	707 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	PGBD1	Q96JS3	809 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	TCEANC2	Q96MN5	208 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	JAKMIP1	Q96N16	626 aa	Known RBP	10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	PDRG1	Q9NUG6	133 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	STAP2	Q9UGK3	403 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564	SUFU	Q9UMX1	484 aa		10.83	□□□□□ -0.68
GABRE-208	ENST00000483564		A0A1B0GUL7	405 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	PTH1R	Q03431	593 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	IQCB1	Q15051	598 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	CNKSR2	Q8WXI2	1034 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	ERCC4	Q92889	916 aa	Predicted RBP	10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	SPATA32	Q96LK8	384 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	SSH2	Q76I76	1423 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	C3	P01024	1663 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	ATP2B1	P20020	1258 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	PRPF40B	Q6NWY9	871 aa	Known RBP	10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	NECTIN2	Q92692	538 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	CDK19	Q9BWU1	502 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	CLSTN2	Q9H4D0	955 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	CWC15	Q9P013	229 aa	Known RBP	10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	TPCN1	Q9ULQ1	816 aa		10.82	□□□□□ -0.68
GABRE-208	ENST00000483564	CHL1	O00533	1208 aa		10.81	□□□□□ -0.68
GABRE-208	ENST00000483564	HTATSF1	O43719	755 aa	Known RBP	10.81	□□□□□ -0.68
GABRE-208	ENST00000483564	SATB1	Q01826	763 aa		10.81	□□□□□ -0.68
GABRE-208	ENST00000483564	BICD2	Q8TD16	824 aa		10.81	□□□□□ -0.68
GABRE-208	ENST00000483564	DONSON	Q9NYP3	566 aa		10.81	□□□□□ -0.68
GABRE-208	ENST00000483564	GOLGA6L19	H0YKK7	550 aa		10.81	□□□□□ -0.68
GABRE-208	ENST00000483564	IFIT2	P09913	472 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms