RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 RASA3Q14644 834 aa12.05□□□□□ -0.48
PRPF4B-206ENST00000481109 UBXN4Q92575 508 aa12.05□□□□□ -0.48
PRPF4B-206ENST00000481109 SUN2Q9UH99 717 aa12.05□□□□□ -0.48
PRPF4B-206ENST00000481109 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 EME2A4GXA9 379 aaPredicted RBP12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 ISM2Q6H9L7 571 aa12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 PROCA1Q8NCQ7 364 aaPredicted RBP12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 ZKSCAN4Q969J2 545 aaPredicted RBP12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 PLEKHG4BQ96PX9 1271 aa12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 HHATQ5VTY9 493 aa12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 CDCA2Q69YH5 1023 aaPredicted RBP12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.04□□□□□ -0.48
PRPF4B-206ENST00000481109 ATXN2Q99700 1313 aaKnown RBP12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 EFCAB8A8MWE9 144 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 GCKP35557 465 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 PLA2G4DQ86XP0 818 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 USP26Q9BXU7 913 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 FUT8Q9BYC5 575 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 MAP2K7O14733 419 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 ERC2O15083 957 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 ST18O60284 1047 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 FAM200AQ8TCP9 573 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 RMI1Q9H9A7 625 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 ARFGAP3Q9NP61 516 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 LMCD1Q9NZU5 365 aa12.03□□□□□ -0.48
PRPF4B-206ENST00000481109 KIAA0556O60303 1618 aa12.02□□□□□ -0.48
PRPF4B-206ENST00000481109 ZSCAN9O15535 394 aaPredicted RBP12.02□□□□□ -0.49
PRPF4B-206ENST00000481109 RTN3O95197 1032 aaPredicted RBP12.02□□□□□ -0.49
PRPF4B-206ENST00000481109 AMOTL1Q8IY63 956 aa12.02□□□□□ -0.49
PRPF4B-206ENST00000481109 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
PRPF4B-206ENST00000481109 SRGAP3O43295 1099 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 MAB21L3Q8N8X9 362 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 PARD3BQ8TEW8 1205 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 CACTINQ8WUQ7 758 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 IQCGQ9H095 443 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 BATF3Q9NR55 127 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 IFT140Q96RY7 1462 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 H3BQF6 201 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 CCAR2Q8N163 923 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 ZGPATQ8N5A5 531 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 GPR161Q8N6U8 529 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 SAAL1Q96ER3 474 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 XAGE2Q96GT9 111 aa12.01□□□□□ -0.49
PRPF4B-206ENST00000481109 EPB41L2O43491 1005 aaKnown RBP12□□□□□ -0.49
PRPF4B-206ENST00000481109 TADA3O75528 432 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 OATP04181 439 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 MVPQ14764 893 aaKnown RBP12□□□□□ -0.49
PRPF4B-206ENST00000481109 FBXW10Q5XX13 1052 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 C3orf20Q8ND61 904 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 AGAP3Q96P47 875 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 KIF9Q9HAQ2 790 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 PTPRGP23470 1445 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 EXOC5O00471 708 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 NPHP1O15259 732 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 SEC31AO94979 1220 aaKnown RBP12□□□□□ -0.49
PRPF4B-206ENST00000481109 CCDC192P0DO97 292 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 ZNF75DP51815 510 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 NUCB1Q02818 461 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 CCDC178Q5BJE1 867 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 SPATA21Q7Z572 469 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 LRRC8AQ8IWT6 810 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 MAGEC3Q8TD91 643 aa12□□□□□ -0.49
PRPF4B-206ENST00000481109 DNMT1P26358 1616 aaKnown RBP12□□□□□ -0.49
PRPF4B-206ENST00000481109 RBM47A0AV96 593 aaKnown RBP11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 LIG3P49916 1009 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 GNAI1P63096 354 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 TBC1D9Q6ZT07 1266 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 AKAP2Q9Y2D5 859 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 GADD45BO75293 160 aaPredicted RBP11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 CLNS1AP54105 237 aaKnown RBP11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 UBE2HP62256 183 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 HSP90B2PQ58FF3 399 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 MYLK4Q86YV6 388 aaPredicted RBP11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 VPS18Q9P253 973 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 CEP126Q9P2H0 1117 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 MYO6Q9UM54 1294 aa11.99□□□□□ -0.49
PRPF4B-206ENST00000481109 RAPGEF6Q8TEU7 1601 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 USP27XA6NNY8 438 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 TPD52L2O43399 206 aaKnown RBP11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 KCNJ6P48051 423 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 RARSP54136 660 aaKnown RBP11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 APOBRQ0VD83 1088 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 PKD2Q13563 968 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 SDCCAG8Q86SQ7 713 aaPredicted RBP11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 PZPP20742 1482 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 NUTM2GQ5VZR2 741 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 TLDC1Q6P9B6 456 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms