RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 XAGE2Q96GT9 111 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 TSPAN10Q9H1Z9 355 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-202ENST00000460925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.17□□□□□ -1.264e-21■■■■■ 391.3
SF3A3-202ENST00000460925 SCHIP1Q9P0W5 487 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-202ENST00000460925 HRH3Q9Y5N1 445 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 FER1L4A9Z1Z3 1794 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 DHX29Q7Z478 1369 aaKnown RBP7.17□□□□□ -1.26
SF3A3-202ENST00000460925 PRDM15P57071 1507 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-202ENST00000460925 A6NJY4 79 aa7.16□□□□□ -1.26
SF3A3-202ENST00000460925 KIF3BO15066 747 aa7.16□□□□□ -1.26
SF3A3-202ENST00000460925 STAU1O95793 577 aaKnown RBP7.16□□□□□ -1.26
SF3A3-202ENST00000460925 SMTNP53814 917 aa7.16□□□□□ -1.26
SF3A3-202ENST00000460925 DCTN4Q9UJW0 460 aa7.16□□□□□ -1.26
SF3A3-202ENST00000460925 PZPP20742 1482 aa7.16□□□□□ -1.26
SF3A3-202ENST00000460925 IQGAP3Q86VI3 1631 aa7.16□□□□□ -1.26
SF3A3-202ENST00000460925 MADDQ8WXG6 1647 aa7.16□□□□□ -1.26
SF3A3-202ENST00000460925 RIMS1Q86UR5 1692 aaKnown RBP7.16□□□□□ -1.26
SF3A3-202ENST00000460925 ANKRD33BA6NCL7 494 aa7.15□□□□□ -1.26
SF3A3-202ENST00000460925 COL19A1Q14993 1142 aa7.15□□□□□ -1.26
SF3A3-202ENST00000460925 SPRYD7Q5W111 196 aa7.15□□□□□ -1.26
SF3A3-202ENST00000460925 UBE2Q2Q8WVN8 375 aa7.15□□□□□ -1.26
SF3A3-202ENST00000460925 ASB16Q96NS5 453 aa7.15□□□□□ -1.26
SF3A3-202ENST00000460925 C2orf49Q9BVC5 232 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-202ENST00000460925 ANO2Q9NQ90 1003 aa7.15□□□□□ -1.26
SF3A3-202ENST00000460925 SERTAD1Q9UHV2 236 aa7.15□□□□□ -1.26
SF3A3-202ENST00000460925 ARID4BQ4LE39 1312 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-202ENST00000460925 CAMSAP1Q5T5Y3 1602 aa7.15□□□□□ -1.27
SF3A3-202ENST00000460925 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 UNCXA6NJT0 531 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 E9PCH4 1651 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 CDK2AP1O14519 115 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 FAM13AO94988 1023 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 IL2RAP01589 272 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 ADH1AP07327 375 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 ZNF16P17020 682 aaPredicted RBP7.14□□□□□ -1.27
SF3A3-202ENST00000460925 AGLP35573 1532 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 C16orf46Q6P387 395 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 GGT6Q6P531 493 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 SLC9A9Q8IVB4 645 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 VWDEQ8N2E2 1590 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 KDF1Q8NAX2 398 aaPredicted RBP7.14□□□□□ -1.27
SF3A3-202ENST00000460925 ESYT1Q9BSJ8 1104 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 KDM5DQ9BY66 1539 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 FAM135AQ9P2D6 1515 aa7.14□□□□□ -1.27
SF3A3-202ENST00000460925 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
SF3A3-202ENST00000460925 TET3O43151 1660 aa7.13□□□□□ -1.27
SF3A3-202ENST00000460925 ABCC3O15438 1527 aa7.13□□□□□ -1.27
SF3A3-202ENST00000460925 PPP1R12BO60237 982 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-202ENST00000460925 PSMA6P60900 246 aaKnown RBP7.13□□□□□ -1.27
SF3A3-202ENST00000460925 NAA30Q147X3 362 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-202ENST00000460925 Q6ZVU0 165 aa7.13□□□□□ -1.27
SF3A3-202ENST00000460925 ZNF598Q86UK7 904 aaKnown RBP7.13□□□□□ -1.27
SF3A3-202ENST00000460925 VTI1AQ96AJ9 217 aa7.13□□□□□ -1.27
SF3A3-202ENST00000460925 ARHGEF10LQ9HCE6 1279 aa7.13□□□□□ -1.27
SF3A3-202ENST00000460925 ZC3H13Q5T200 1668 aaKnown RBP7.12□□□□□ -1.27
SF3A3-202ENST00000460925 NUP155O75694 1391 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 MAPK1P28482 360 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-202ENST00000460925 CLN3Q13286 438 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 NNTQ13423 1086 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 MTMR3Q13615 1198 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 FBXO33Q7Z6M2 555 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 ZSCAN29Q8IWY8 852 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-202ENST00000460925 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 CNKSR1Q969H4 720 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 MYO19Q96H55 970 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 KLF16Q9BXK1 252 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-202ENST00000460925 BCL2L13Q9BXK5 485 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 RBCK1Q9BYM8 510 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 C3P01024 1663 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 ADAMTSL3P82987 1691 aa7.12□□□□□ -1.27
SF3A3-202ENST00000460925 EFCAB6Q5THR3 1501 aa7.11□□□□□ -1.27
SF3A3-202ENST00000460925 DHX57Q6P158 1386 aaKnown RBP7.11□□□□□ -1.27
SF3A3-202ENST00000460925 SPHKAPQ2M3C7 1700 aa7.11□□□□□ -1.27
SF3A3-202ENST00000460925 ZNF295-AS1Q8N0V1 137 aa7.11□□□□□ -1.27
SF3A3-202ENST00000460925 SNIP1Q8TAD8 396 aaKnown RBP7.11□□□□□ -1.27
SF3A3-202ENST00000460925 CITED4Q96RK1 184 aa7.11□□□□□ -1.27
SF3A3-202ENST00000460925 FHDC1Q9C0D6 1143 aaPredicted RBP7.11□□□□□ -1.27
SF3A3-202ENST00000460925 RAB6BQ9NRW1 208 aa7.11□□□□□ -1.27
SF3A3-202ENST00000460925 IGSF5Q9NSI5 407 aa7.11□□□□□ -1.27
SF3A3-202ENST00000460925 PKD2L1Q9P0L9 805 aa7.11□□□□□ -1.27
SF3A3-202ENST00000460925 PREX1Q8TCU6 1659 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 TNFRSF10BO14763 440 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 ALDH1A1P00352 501 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 TLR1Q15399 786 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 TEAD4Q15561 434 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 COX20Q5RI15 118 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 ZNF697Q5TEC3 545 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 SAP130Q9H0E3 1048 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 KIAA1522Q9P206 1035 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-202ENST00000460925 UGGT1Q9NYU2 1555 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 MYO5BQ9ULV0 1848 aa7.1□□□□□ -1.27
SF3A3-202ENST00000460925 MROH2AA6NES4 1674 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 VAMP1P23763 118 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 PTGIRP43119 386 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 ZNF326Q5BKZ1 582 aaKnown RBP7.09□□□□□ -1.27
SF3A3-202ENST00000460925 ALKBH2Q6NS38 261 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 QTRT2Q9H974 415 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms