RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SCG3Q8WXD2 468 aaKnown RBP10.04□□□□□ -0.8
LINC00458-202ENST00000427299 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
LINC00458-202ENST00000427299 MAFBQ9Y5Q3 323 aaPredicted RBP10.04□□□□□ -0.8
LINC00458-202ENST00000427299 RASA1P20936 1047 aa10.03□□□□□ -0.8
LINC00458-202ENST00000427299 SEC13P55735 322 aa10.03□□□□□ -0.8
LINC00458-202ENST00000427299 GLMNQ92990 594 aa10.03□□□□□ -0.8
LINC00458-202ENST00000427299 NACC1Q96RE7 527 aa10.03□□□□□ -0.8
LINC00458-202ENST00000427299 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
LINC00458-202ENST00000427299 LILRB5O75023 590 aa10.02□□□□□ -0.81
LINC00458-202ENST00000427299 GRIK4Q16099 956 aa10.02□□□□□ -0.81
LINC00458-202ENST00000427299 HIF1AQ16665 826 aa10.02□□□□□ -0.81
LINC00458-202ENST00000427299 IER5Q5VY09 327 aa10.02□□□□□ -0.81
LINC00458-202ENST00000427299 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.01□□□□□ -0.81
LINC00458-202ENST00000427299 ZMYM1Q5SVZ6 1142 aa10.01□□□□□ -0.81
LINC00458-202ENST00000427299 UBE2OQ9C0C9 1292 aaKnown RBP10.01□□□□□ -0.81
LINC00458-202ENST00000427299 EFCC1Q9HA90 598 aa10.01□□□□□ -0.81
LINC00458-202ENST00000427299 SLC6A14Q9UN76 642 aa10.01□□□□□ -0.81
LINC00458-202ENST00000427299 CHMP7Q8WUX9 453 aaPredicted RBP10□□□□□ -0.81
LINC00458-202ENST00000427299 CLUAP1Q96AJ1 413 aa10□□□□□ -0.81
LINC00458-202ENST00000427299 NGLY1Q96IV0 654 aa10□□□□□ -0.81
LINC00458-202ENST00000427299 KRTAP9-2Q9BYQ4 174 aa10□□□□□ -0.81
LINC00458-202ENST00000427299 DYRK3O43781 588 aa9.99□□□□□ -0.81
LINC00458-202ENST00000427299 RTN1Q16799 776 aa9.99□□□□□ -0.81
LINC00458-202ENST00000427299 TRAPPC3LQ5T215 181 aa9.99□□□□□ -0.81
LINC00458-202ENST00000427299 PROSER2Q86WR7 435 aaPredicted RBP9.99□□□□□ -0.81
LINC00458-202ENST00000427299 GSX2Q9BZM3 304 aa9.99□□□□□ -0.81
LINC00458-202ENST00000427299 DMGDHQ9UI17 866 aaKnown RBP9.99□□□□□ -0.81
LINC00458-202ENST00000427299 BCS1LQ9Y276 419 aa9.99□□□□□ -0.81
LINC00458-202ENST00000427299 TBC1D8BQ0IIM8 1120 aa9.98□□□□□ -0.81
LINC00458-202ENST00000427299 FOXD4L6Q3SYB3 417 aaPredicted RBP9.98□□□□□ -0.81
LINC00458-202ENST00000427299 CRTC2Q53ET0 693 aaPredicted RBP9.98□□□□□ -0.81
LINC00458-202ENST00000427299 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
LINC00458-202ENST00000427299 NAGPAQ9UK23 515 aa9.98□□□□□ -0.81
LINC00458-202ENST00000427299 A0A0A0MRY4 1105 aa9.97□□□□□ -0.81
LINC00458-202ENST00000427299 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
LINC00458-202ENST00000427299 ELNP15502 786 aa9.97□□□□□ -0.81
LINC00458-202ENST00000427299 SELPP16109 830 aa9.97□□□□□ -0.81
LINC00458-202ENST00000427299 PTK7Q13308 1070 aa9.97□□□□□ -0.81
LINC00458-202ENST00000427299 IGFLR1Q9H665 355 aa9.97□□□□□ -0.81
LINC00458-202ENST00000427299 JPH1Q9HDC5 661 aaPredicted RBP9.97□□□□□ -0.81
LINC00458-202ENST00000427299 DNAJB12Q9NXW2 375 aaKnown RBP9.97□□□□□ -0.81
LINC00458-202ENST00000427299 KRTAP9-6A0A140TA67 174 aa9.96□□□□□ -0.82
LINC00458-202ENST00000427299 C9orf172C9J069 976 aa9.96□□□□□ -0.82
LINC00458-202ENST00000427299 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
LINC00458-202ENST00000427299 ADGRE1Q14246 886 aa9.96□□□□□ -0.82
LINC00458-202ENST00000427299 KANK4Q5T7N3 995 aaPredicted RBP9.96□□□□□ -0.82
LINC00458-202ENST00000427299 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
LINC00458-202ENST00000427299 ILDR2Q71H61 639 aa9.96□□□□□ -0.82
LINC00458-202ENST00000427299 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.96□□□□□ -0.82
LINC00458-202ENST00000427299 IGFBP4P22692 258 aa9.95□□□□□ -0.82
LINC00458-202ENST00000427299 AFF1P51825 1210 aaKnown RBP9.95□□□□□ -0.82
LINC00458-202ENST00000427299 DPYDQ12882 1025 aa9.95□□□□□ -0.82
LINC00458-202ENST00000427299 CCINQ13939 588 aa9.95□□□□□ -0.82
LINC00458-202ENST00000427299 MBTPS1Q14703 1052 aa9.95□□□□□ -0.82
LINC00458-202ENST00000427299 NUDT8Q8WV74 236 aa9.95□□□□□ -0.82
LINC00458-202ENST00000427299 NFKB1P19838 968 aa9.94□□□□□ -0.82
LINC00458-202ENST00000427299 PSAPL1Q6NUJ1 521 aa9.94□□□□□ -0.82
LINC00458-202ENST00000427299 PNMA5Q96PV4 448 aa9.94□□□□□ -0.82
LINC00458-202ENST00000427299 HINFPQ9BQA5 517 aa9.94□□□□□ -0.82
LINC00458-202ENST00000427299 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
LINC00458-202ENST00000427299 LGR5O75473 907 aa9.93□□□□□ -0.82
LINC00458-202ENST00000427299 RAC1P63000 192 aa9.93□□□□□ -0.82
LINC00458-202ENST00000427299 LENG1Q96BZ8 264 aaPredicted RBP9.93□□□□□ -0.82
LINC00458-202ENST00000427299 FAM196BA6NMK8 535 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L15C9J2P7 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L13C9JLJ4 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L12C9JPN9 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L11C9JVI0 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L21D6R901 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L18D6R9N7 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L22D6RA61 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L17D6RBQ6 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L19D6RCP7 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L20D6RJB6 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 INPP5BP32019 993 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 USP17L24Q0WX57 530 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 ANKMY2Q8IV38 441 aa9.92□□□□□ -0.82
LINC00458-202ENST00000427299 MAP3K6O95382 1288 aa9.91□□□□□ -0.82
LINC00458-202ENST00000427299 PRSS36Q5K4E3 855 aa9.91□□□□□ -0.82
LINC00458-202ENST00000427299 SHISA2Q6UWI4 295 aa9.91□□□□□ -0.82
LINC00458-202ENST00000427299 TXNRD3Q86VQ6 643 aa9.91□□□□□ -0.82
LINC00458-202ENST00000427299 FMR1NBQ8N0W7 255 aaPredicted RBP9.91□□□□□ -0.82
LINC00458-202ENST00000427299 KLK14Q9P0G3 267 aa9.91□□□□□ -0.82
LINC00458-202ENST00000427299 RGS9O75916 674 aaPredicted RBP9.9□□□□□ -0.82
LINC00458-202ENST00000427299 H2AFB1P0C5Y9 115 aa9.9□□□□□ -0.82
LINC00458-202ENST00000427299 H2AFB2P0C5Z0 115 aa9.9□□□□□ -0.82
LINC00458-202ENST00000427299 EPB42P16452 691 aa9.9□□□□□ -0.82
LINC00458-202ENST00000427299 NRG1Q02297 640 aaPredicted RBP9.9□□□□□ -0.82
LINC00458-202ENST00000427299 ARXQ96QS3 562 aa9.9□□□□□ -0.82
LINC00458-202ENST00000427299 IDH3AP50213 366 aa9.89□□□□□ -0.83
LINC00458-202ENST00000427299 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
LINC00458-202ENST00000427299 QTRT2Q9H974 415 aaKnown RBP9.89□□□□□ -0.83
LINC00458-202ENST00000427299 ZFATQ9P243 1243 aa9.89□□□□□ -0.83
LINC00458-202ENST00000427299 WEE1P30291 646 aa9.88□□□□□ -0.83
LINC00458-202ENST00000427299 PCSK7Q16549 785 aa9.88□□□□□ -0.83
LINC00458-202ENST00000427299 FAM35AQ86V20 835 aa9.88□□□□□ -0.83
LINC00458-202ENST00000427299 DMRTC2Q8IXT2 367 aaPredicted RBP9.88□□□□□ -0.83
LINC00458-202ENST00000427299 SCO2A0A1W2PP80 73 aa9.87□□□□□ -0.83
LINC00458-202ENST00000427299 DGKZQ13574 1117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms