RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 ZNF280CQ8ND82 737 aa9.6□□□□□ -0.87
SSBP3-207ENST00000426150 TTC16Q8NEE8 873 aa9.6□□□□□ -0.87
SSBP3-207ENST00000426150 PIK3R5Q8WYR1 880 aa9.6□□□□□ -0.87
SSBP3-207ENST00000426150 HSH2DQ96JZ2 352 aa9.6□□□□□ -0.87
SSBP3-207ENST00000426150 MRS2Q9HD23 443 aa9.6□□□□□ -0.87
SSBP3-207ENST00000426150 SCAMP3O14828 347 aaKnown RBP9.59□□□□□ -0.87
SSBP3-207ENST00000426150 SORBS3O60504 671 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 BMP2P12643 396 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 ATP4AP20648 1035 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 ORC1Q13415 861 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 WDR44Q5JSH3 913 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 PRICKLE2Q7Z3G6 844 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 RNF217Q8TC41 542 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 USP35Q9P2H5 1018 aa9.59□□□□□ -0.87
SSBP3-207ENST00000426150 A6NHS1 94 aa9.58□□□□□ -0.88
SSBP3-207ENST00000426150 EIF1AYO14602 144 aaKnown RBP9.58□□□□□ -0.88
SSBP3-207ENST00000426150 IDH3AP50213 366 aa9.58□□□□□ -0.88
SSBP3-207ENST00000426150 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
SSBP3-207ENST00000426150 FBF1Q8TES7 1133 aa9.58□□□□□ -0.88
SSBP3-207ENST00000426150 CFHR5Q9BXR6 569 aa9.58□□□□□ -0.88
SSBP3-207ENST00000426150 ANKIB1Q9P2G1 1089 aa9.58□□□□□ -0.88
SSBP3-207ENST00000426150 MRC2Q9UBG0 1479 aa9.58□□□□□ -0.88
SSBP3-207ENST00000426150 RIMBP3CA6NJZ7 1639 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 RIMBP3BA6NNM3 1639 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 RIMBP3Q9UFD9 1639 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 NEFLP07196 543 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 LYSMD3Q7Z3D4 306 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 C8orf37Q96NL8 207 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 VTI1BQ9UEU0 232 aa9.57□□□□□ -0.88
SSBP3-207ENST00000426150 GNA15P30679 374 aa9.56□□□□□ -0.88
SSBP3-207ENST00000426150 HDLBPQ00341 1268 aaKnown RBP9.56□□□□□ -0.88
SSBP3-207ENST00000426150 CYB5RLQ6IPT4 315 aa9.56□□□□□ -0.88
SSBP3-207ENST00000426150 ZIC5Q96T25 663 aa9.56□□□□□ -0.88
SSBP3-207ENST00000426150 DNAJC25Q9H1X3 360 aa9.56□□□□□ -0.88
SSBP3-207ENST00000426150 SMARCA4P51532 1647 aa9.56□□□□□ -0.88
SSBP3-207ENST00000426150 LOC105371045A0A1W2PR82 267 aa9.55□□□□□ -0.88
SSBP3-207ENST00000426150 INPP5BP32019 993 aa9.55□□□□□ -0.88
SSBP3-207ENST00000426150 ARSDP51689 593 aa9.55□□□□□ -0.88
SSBP3-207ENST00000426150 MRPL14Q6P1L8 145 aaKnown RBP9.55□□□□□ -0.88
SSBP3-207ENST00000426150 BTLAQ7Z6A9 289 aa9.55□□□□□ -0.88
SSBP3-207ENST00000426150 TMEM87AQ8NBN3 555 aa9.55□□□□□ -0.88
SSBP3-207ENST00000426150 USP20Q9Y2K6 914 aa9.55□□□□□ -0.88
SSBP3-207ENST00000426150 A0A1B0GTH6 734 aa9.54□□□□□ -0.88
SSBP3-207ENST00000426150 MSX1P28360 303 aa9.54□□□□□ -0.88
SSBP3-207ENST00000426150 ZC3H6P61129 1189 aaKnown RBP9.54□□□□□ -0.88
SSBP3-207ENST00000426150 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-207ENST00000426150 LRRC69Q6ZNQ3 347 aa9.54□□□□□ -0.88
SSBP3-207ENST00000426150 NEUROD4Q9HD90 331 aa9.54□□□□□ -0.88
SSBP3-207ENST00000426150 TIMMDC1Q9NPL8 285 aa9.54□□□□□ -0.88
SSBP3-207ENST00000426150 RTCBQ9Y3I0 505 aaKnown RBP9.54□□□□□ -0.88
SSBP3-207ENST00000426150 CPNE3O75131 537 aaKnown RBP9.53□□□□□ -0.88
SSBP3-207ENST00000426150 RGS20O76081 388 aa9.53□□□□□ -0.88
SSBP3-207ENST00000426150 RHOQP17081 205 aa9.53□□□□□ -0.88
SSBP3-207ENST00000426150 ERCC5P28715 1186 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-207ENST00000426150 C9orf131Q5VYM1 1079 aa9.53□□□□□ -0.88
SSBP3-207ENST00000426150 XKR5Q6UX68 686 aa9.53□□□□□ -0.88
SSBP3-207ENST00000426150 WDR62O43379 1518 aa9.52□□□□□ -0.88
SSBP3-207ENST00000426150 TTLL8A6PVC2 850 aa9.52□□□□□ -0.89
SSBP3-207ENST00000426150 TNFRSF21O75509 655 aa9.52□□□□□ -0.89
SSBP3-207ENST00000426150 TRIP4Q15650 581 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-207ENST00000426150 FRMD6Q96NE9 622 aa9.52□□□□□ -0.89
SSBP3-207ENST00000426150 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
SSBP3-207ENST00000426150 PDE12Q6L8Q7 609 aaKnown RBP9.51□□□□□ -0.89
SSBP3-207ENST00000426150 CMTR1Q8N1G2 835 aaKnown RBP9.51□□□□□ -0.89
SSBP3-207ENST00000426150 FOXD3Q9UJU5 478 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-207ENST00000426150 KCNMB2Q9Y691 235 aa9.51□□□□□ -0.89
SSBP3-207ENST00000426150 AK5Q9Y6K8 562 aa9.51□□□□□ -0.89
SSBP3-207ENST00000426150 A0A1W2PNR3 127 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 UBAP1LF5GYI3 381 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 FANCCQ00597 558 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 SCARF1Q14162 830 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 USPL1Q5W0Q7 1092 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 ZNF438Q7Z4V0 828 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 METTL16Q86W50 562 aaKnown RBP9.5□□□□□ -0.89
SSBP3-207ENST00000426150 SNX29Q8TEQ0 813 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 METTL5Q9NRN9 209 aaKnown RBP9.5□□□□□ -0.89
SSBP3-207ENST00000426150 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 SPG7Q9UQ90 795 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 CADPSQ9ULU8 1353 aa9.5□□□□□ -0.89
SSBP3-207ENST00000426150 FIGNL2A6NMB9 653 aa9.49□□□□□ -0.89
SSBP3-207ENST00000426150 GRNP28799 593 aaKnown RBP9.49□□□□□ -0.89
SSBP3-207ENST00000426150 TYRO3Q06418 890 aa9.49□□□□□ -0.89
SSBP3-207ENST00000426150 NT5DC4Q86YG4 428 aa9.49□□□□□ -0.89
SSBP3-207ENST00000426150 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
SSBP3-207ENST00000426150 ARHGEF11O15085 1522 aa9.49□□□□□ -0.89
SSBP3-207ENST00000426150 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-207ENST00000426150 AVPP01185 164 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 BMP1P13497 986 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 EPB42P16452 691 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 RAD51AP2Q09MP3 1159 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.48□□□□□ -0.89
SSBP3-207ENST00000426150 NAALADL2Q58DX5 795 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 RNF34Q969K3 372 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 CCDC74AQ96AQ1 378 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 CRELD1Q96HD1 420 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 CEP63Q96MT8 703 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 CRISPLD1Q9H336 500 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 ZFYVE28Q9HCC9 887 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms