RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CTIFO43310 598 aaKnown RBP18.09■□□□□ 0.49
C9orf3-204ENST00000424143 OS9Q13438 667 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-204ENST00000424143 ADCK5Q3MIX3 580 aa18.09■□□□□ 0.49
C9orf3-204ENST00000424143 FOXD4L6Q3SYB3 417 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-204ENST00000424143 FOXD4L3Q6VB84 417 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-204ENST00000424143 KIF13AQ9H1H9 1805 aa18.09■□□□□ 0.49
C9orf3-204ENST00000424143 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
C9orf3-204ENST00000424143 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-204ENST00000424143 TTC6Q86TZ1 520 aa18.09■□□□□ 0.49
C9orf3-204ENST00000424143 ZNF710Q8N1W2 664 aa18.09■□□□□ 0.49
C9orf3-204ENST00000424143 KCNF1Q9H3M0 494 aa18.09■□□□□ 0.49
C9orf3-204ENST00000424143 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.49
C9orf3-204ENST00000424143 SLC27A2O14975 620 aa18.08■□□□□ 0.48
C9orf3-204ENST00000424143 CDC25BP30305 580 aa18.08■□□□□ 0.48
C9orf3-204ENST00000424143 KRT32Q14532 448 aa18.08■□□□□ 0.48
C9orf3-204ENST00000424143 USPL1Q5W0Q7 1092 aa18.08■□□□□ 0.48
C9orf3-204ENST00000424143 LINS1Q8NG48 757 aa18.08■□□□□ 0.48
C9orf3-204ENST00000424143 TDRD7Q8NHU6 1098 aaKnown RBP18.08■□□□□ 0.48
C9orf3-204ENST00000424143 ZNF830Q96NB3 372 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-204ENST00000424143 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.48
C9orf3-204ENST00000424143 TPCN1Q9ULQ1 816 aa18.08■□□□□ 0.48
C9orf3-204ENST00000424143 NPHP4O75161 1426 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-204ENST00000424143 AP5Z1O43299 807 aa18.07■□□□□ 0.48
C9orf3-204ENST00000424143 RPS6KB1P23443 525 aa18.07■□□□□ 0.48
C9orf3-204ENST00000424143 TYRO3Q06418 890 aa18.07■□□□□ 0.48
C9orf3-204ENST00000424143 ANKRD7Q92527 254 aa18.07■□□□□ 0.48
C9orf3-204ENST00000424143 CLSTN2Q9H4D0 955 aa18.07■□□□□ 0.48
C9orf3-204ENST00000424143 MRVI1Q9Y6F6 885 aa18.07■□□□□ 0.48
C9orf3-204ENST00000424143 SIPA1L3O60292 1781 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-204ENST00000424143 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
C9orf3-204ENST00000424143 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
C9orf3-204ENST00000424143 THEMISQ8N1K5 641 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-204ENST00000424143 ABTB2Q8N961 1025 aa18.06■□□□□ 0.48
C9orf3-204ENST00000424143 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
C9orf3-204ENST00000424143 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-204ENST00000424143 COL15A1P39059 1388 aa18.06■□□□□ 0.48
C9orf3-204ENST00000424143 CAMTA1Q9Y6Y1 1673 aa18.05■□□□□ 0.48
C9orf3-204ENST00000424143 TEFQ10587 303 aa18.05■□□□□ 0.48
C9orf3-204ENST00000424143 PLA2G4DQ86XP0 818 aa18.05■□□□□ 0.48
C9orf3-204ENST00000424143 VPS37CA5D8V6 355 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-204ENST00000424143 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
C9orf3-204ENST00000424143 G3BP1Q13283 466 aaKnown RBP eCLIP18.05■□□□□ 0.48
C9orf3-204ENST00000424143 GTPBP4Q9BZE4 634 aaKnown RBP18.05■□□□□ 0.48
C9orf3-204ENST00000424143 GRM8O00222 908 aa18.04■□□□□ 0.48
C9orf3-204ENST00000424143 DDX58O95786 925 aaKnown RBP18.04■□□□□ 0.48
C9orf3-204ENST00000424143 NMIQ13287 307 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-204ENST00000424143 ATL3Q6DD88 541 aa18.04■□□□□ 0.48
C9orf3-204ENST00000424143 AACSQ86V21 672 aa18.04■□□□□ 0.48
C9orf3-204ENST00000424143 ZSCAN16Q9H4T2 348 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-204ENST00000424143 LGR6Q9HBX8 967 aa18.04■□□□□ 0.48
C9orf3-204ENST00000424143 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
C9orf3-204ENST00000424143 NEMFO60524 1076 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 SASH1O94885 1247 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 CPA1P15085 419 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 SARM1Q6SZW1 724 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 LEO1Q8WVC0 666 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-204ENST00000424143 LLPHQ9BRT6 129 aaKnown RBP18.03■□□□□ 0.48
C9orf3-204ENST00000424143 TNMDQ9H2S6 317 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 BCL2L12Q9HB09 334 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 PYCARDQ9ULZ3 195 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 MAP3K2Q9Y2U5 619 aa18.03■□□□□ 0.48
C9orf3-204ENST00000424143 CTAGE5O15320 804 aa18.02■□□□□ 0.48
C9orf3-204ENST00000424143 DMTNQ08495 405 aa18.02■□□□□ 0.48
C9orf3-204ENST00000424143 NBPF6Q5VWK0 638 aa18.02■□□□□ 0.48
C9orf3-204ENST00000424143 NBPF4Q96M43 638 aa18.02■□□□□ 0.48
C9orf3-204ENST00000424143 FEZ1Q99689 392 aa18.02■□□□□ 0.48
C9orf3-204ENST00000424143 LIG1P18858 919 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 KCNJ4P48050 445 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 ZNF75DP51815 510 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 CHMP4CQ96CF2 233 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 EAF2Q96CJ1 260 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-204ENST00000424143 SPATA32Q96LK8 384 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 CBX8Q9HC52 389 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
C9orf3-204ENST00000424143 PAXBP1Q9Y5B6 917 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 GOLGA6L4A6NEF3 574 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 TOB2Q14106 344 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-204ENST00000424143 CDC37L1Q7L3B6 337 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 NECAB1Q8N987 351 aa18.01■□□□□ 0.47
C9orf3-204ENST00000424143 SMTNL1A8MU46 457 aa18■□□□□ 0.47
C9orf3-204ENST00000424143 ZNF530Q6P9A1 599 aaPredicted RBP18■□□□□ 0.47
C9orf3-204ENST00000424143 PDCL2Q8N4E4 241 aa18■□□□□ 0.47
C9orf3-204ENST00000424143 KAZALD1Q96I82 304 aa18■□□□□ 0.47
C9orf3-204ENST00000424143 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
C9orf3-204ENST00000424143 KCND1Q9NSA2 647 aa18■□□□□ 0.47
C9orf3-204ENST00000424143 CFAP45Q9UL16 551 aa18■□□□□ 0.47
C9orf3-204ENST00000424143 PHF8Q9UPP1 1060 aa18■□□□□ 0.47
C9orf3-204ENST00000424143 RIOK3O14730 519 aaKnown RBP17.99■□□□□ 0.47
C9orf3-204ENST00000424143 KCNQ3O43525 872 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 TAF5LO75529 589 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 ATP5JP18859 108 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 RESTQ13127 1097 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 GTF3C6Q969F1 213 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 FAM227BQ96M60 508 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 DACT1Q9NYF0 836 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-204ENST00000424143 SLIT3O75094 1523 aa17.99■□□□□ 0.47
C9orf3-204ENST00000424143 LARP1Q6PKG0 1096 aaKnown RBP17.98■□□□□ 0.47
C9orf3-204ENST00000424143 LTV1Q96GA3 475 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms