RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PPARDQ03181 441 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 TCERG1LQ5VWI1 586 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
UBR4-205ENST00000417040 RHOXF2Q9BQY4 288 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 ARFGAP3Q9NP61 516 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 CCDC40Q4G0X9 1142 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 TMEM67Q5HYA8 995 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 NCOA1Q15788 1441 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
UBR4-205ENST00000417040 N4BP3O15049 544 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 SYKP43405 635 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 RRAGBQ5VZM2 374 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 NUTM2BA6NNL0 878 aaPredicted RBP13.84□□□□□ -0.19
UBR4-205ENST00000417040 NUTM2EB1AL46 878 aaPredicted RBP13.84□□□□□ -0.19
UBR4-205ENST00000417040 NUTM2AQ8IVF1 878 aaPredicted RBP13.84□□□□□ -0.19
UBR4-205ENST00000417040 AKAP2Q9Y2D5 859 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 ANXA1P04083 346 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 METAP2P50579 478 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■□□□ 11.8
UBR4-205ENST00000417040 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
UBR4-205ENST00000417040 FLIIQ13045 1269 aa13.84□□□□□ -0.19
UBR4-205ENST00000417040 IDEP14735 1019 aa13.83□□□□□ -0.19
UBR4-205ENST00000417040 CEP112Q8N8E3 955 aa13.83□□□□□ -0.19
UBR4-205ENST00000417040 ATRIPQ8WXE1 791 aa13.83□□□□□ -0.19
UBR4-205ENST00000417040 BRF1Q92994 677 aa13.83□□□□□ -0.19
UBR4-205ENST00000417040 CTAGE15A4D2H0 777 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 CTAGE8P0CG41 777 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 CTAGE6Q86UF2 777 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 VPS36Q86VN1 386 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 CTAGE4Q8IX94 777 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 ATP5J2-PTCD1G3V325 749 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 SLU7O95391 586 aaKnown RBP13.83□□□□□ -0.2
UBR4-205ENST00000417040 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 CTCFLQ8NI51 663 aaPredicted RBP13.83□□□□□ -0.2
UBR4-205ENST00000417040 LZTFL1Q9NQ48 299 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 HYPKQ9NX55 129 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 CCDC194A0A1B0GVG4 234 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 F13A1P00488 732 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 U2AF2P26368 475 aaKnown RBP eCLIP13.83□□□□□ -0.28e-7■■■■□ 25.1
UBR4-205ENST00000417040 IARSP41252 1262 aaKnown RBP13.83□□□□□ -0.2
UBR4-205ENST00000417040 SMIM23A6NLE4 172 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 DTNBO60941 627 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 RAB3GAP1Q15042 981 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 KRBA2Q6ZNG9 492 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 CHST3Q7LGC8 479 aa13.83□□□□□ -0.2
UBR4-205ENST00000417040 GTPBP4Q9BZE4 634 aaKnown RBP13.83□□□□□ -0.2
UBR4-205ENST00000417040 Q6ZUG5 572 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 RBSNQ9H1K0 784 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 LMOD1P29536 600 aaPredicted RBP13.82□□□□□ -0.2
UBR4-205ENST00000417040 TYRO3Q06418 890 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 MEIS3Q99687 375 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 ECHDC1Q9NTX5 307 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 GOLGA6L9A6NEM1 432 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 TTC31Q49AM3 519 aaPredicted RBP13.82□□□□□ -0.2
UBR4-205ENST00000417040 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
UBR4-205ENST00000417040 FAM200AQ8TCP9 573 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 TRIM47Q96LD4 638 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 PHAXQ9H814 394 aaKnown RBP13.82□□□□□ -0.2
UBR4-205ENST00000417040 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
UBR4-205ENST00000417040 DDX46Q7L014 1031 aaKnown RBP13.82□□□□□ -0.2
UBR4-205ENST00000417040 VGLL3A8MV65 326 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 TTC16Q8NEE8 873 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 ESYT1Q9BSJ8 1104 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 PRC1O43663 620 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
UBR4-205ENST00000417040 HSPA4P34932 840 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 MSL1Q68DK7 614 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 RABEP2Q9H5N1 569 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 CCDC196A0A1B0GTZ2 297 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 ZEB2O60315 1214 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 CTNNA2P26232 953 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 MAP3K1Q13233 1512 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 FGFR1OPO95684 399 aaKnown RBP13.81□□□□□ -0.2
UBR4-205ENST00000417040 CETN2P41208 172 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
UBR4-205ENST00000417040 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
UBR4-205ENST00000417040 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 SPECC1LQ69YQ0 1117 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 PTPRCP08575 1304 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 PCF11O94913 1555 aaKnown RBP13.8□□□□□ -0.2
UBR4-205ENST00000417040 GPTP24298 496 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 IRX3P78415 501 aaPredicted RBP13.8□□□□□ -0.2
UBR4-205ENST00000417040 GOLGA1Q92805 767 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 A0A087WZG4 1122 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 IVLP07476 585 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 ARID5AQ03989 594 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
UBR4-205ENST00000417040 TMEM110-MUSTN1A8MSY1 372 aa13.79□□□□□ -0.2
UBR4-205ENST00000417040 STX17P56962 302 aa13.79□□□□□ -0.2
UBR4-205ENST00000417040 MAP3K12Q12852 859 aa13.79□□□□□ -0.2
UBR4-205ENST00000417040 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
UBR4-205ENST00000417040 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
UBR4-205ENST00000417040 CCDC97Q96F63 343 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms