RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ARSDP51689 593 aa8.53□□□□□ -1.04
LSM5-206ENST00000409987 TYRO3Q06418 890 aa8.53□□□□□ -1.04
LSM5-206ENST00000409987 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
LSM5-206ENST00000409987 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
LSM5-206ENST00000409987 MRRFQ96E11 262 aaKnown RBP8.53□□□□□ -1.04
LSM5-206ENST00000409987 GAS2L1Q99501 681 aaPredicted RBP8.53□□□□□ -1.04
LSM5-206ENST00000409987 NIF3L1Q9GZT8 377 aa8.53□□□□□ -1.04
LSM5-206ENST00000409987 PCSK2P16519 638 aa8.52□□□□□ -1.05
LSM5-206ENST00000409987 THBS1P07996 1170 aa8.51□□□□□ -1.05
LSM5-206ENST00000409987 MAPK8P45983 427 aa8.51□□□□□ -1.05
LSM5-206ENST00000409987 TRIP4Q15650 581 aaPredicted RBP8.51□□□□□ -1.05
LSM5-206ENST00000409987 C8orf34Q49A92 452 aa8.51□□□□□ -1.05
LSM5-206ENST00000409987 RTCBQ9Y3I0 505 aaKnown RBP8.51□□□□□ -1.05
LSM5-206ENST00000409987 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
LSM5-206ENST00000409987 GJA3Q9Y6H8 435 aa8.51□□□□□ -1.05
LSM5-206ENST00000409987 PTSQ03393 145 aa8.5□□□□□ -1.05
LSM5-206ENST00000409987 NLRP8Q86W28 1048 aa8.5□□□□□ -1.05
LSM5-206ENST00000409987 CMTR1Q8N1G2 835 aaKnown RBP8.5□□□□□ -1.05
LSM5-206ENST00000409987 PGBD3Q8N328 593 aa8.5□□□□□ -1.05
LSM5-206ENST00000409987 CEP63Q96MT8 703 aa8.5□□□□□ -1.05
LSM5-206ENST00000409987 SETDB2Q96T68 719 aa8.5□□□□□ -1.05
LSM5-206ENST00000409987 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
LSM5-206ENST00000409987 LCE2BO14633 110 aa8.49□□□□□ -1.05
LSM5-206ENST00000409987 RPLP1P05386 114 aaKnown RBP8.49□□□□□ -1.05
LSM5-206ENST00000409987 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
LSM5-206ENST00000409987 ENOX2Q16206 610 aaKnown RBP8.49□□□□□ -1.05
LSM5-206ENST00000409987 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
LSM5-206ENST00000409987 WWC3Q9ULE0 1092 aa8.49□□□□□ -1.05
LSM5-206ENST00000409987 PNMA6FA0A0J9YX94 578 aa8.48□□□□□ -1.05
LSM5-206ENST00000409987 ORC1Q13415 861 aa8.48□□□□□ -1.05
LSM5-206ENST00000409987 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
LSM5-206ENST00000409987 TTC16Q8NEE8 873 aa8.48□□□□□ -1.05
LSM5-206ENST00000409987 ZCCHC2Q9C0B9 1178 aaKnown RBP8.48□□□□□ -1.05
LSM5-206ENST00000409987 UBAP1LF5GYI3 381 aa8.47□□□□□ -1.05
LSM5-206ENST00000409987 PRPF40AO75400 957 aaKnown RBP8.47□□□□□ -1.05
LSM5-206ENST00000409987 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
LSM5-206ENST00000409987 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
LSM5-206ENST00000409987 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
LSM5-206ENST00000409987 BRD7Q9NPI1 651 aa8.47□□□□□ -1.05
LSM5-206ENST00000409987 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
LSM5-206ENST00000409987 LBRQ14739 615 aaKnown RBP8.46□□□□□ -1.06
LSM5-206ENST00000409987 XKR5Q6UX68 686 aa8.46□□□□□ -1.06
LSM5-206ENST00000409987 DUSP9Q99956 384 aaKnown RBP8.46□□□□□ -1.06
LSM5-206ENST00000409987 CFHR5Q9BXR6 569 aa8.46□□□□□ -1.06
LSM5-206ENST00000409987 SENP2Q9HC62 589 aa8.46□□□□□ -1.06
LSM5-206ENST00000409987 CUEDC1Q9NWM3 386 aaPredicted RBP8.46□□□□□ -1.06
LSM5-206ENST00000409987 FNDC3AQ9Y2H6 1198 aaKnown RBP8.46□□□□□ -1.06
LSM5-206ENST00000409987 EIF1AYO14602 144 aaKnown RBP8.45□□□□□ -1.06
LSM5-206ENST00000409987 TNFRSF21O75509 655 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 FAM157BP0CG42 384 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 EPB42P16452 691 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 VAMP1P23763 118 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 PDE12Q6L8Q7 609 aaKnown RBP8.45□□□□□ -1.06
LSM5-206ENST00000409987 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 KIFC2Q96AC6 838 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 TRIM47Q96LD4 638 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 NUCKS1Q9H1E3 243 aaKnown RBP8.45□□□□□ -1.06
LSM5-206ENST00000409987 IGSF5Q9NSI5 407 aa8.45□□□□□ -1.06
LSM5-206ENST00000409987 GMPR2Q9P2T1 348 aaKnown RBP8.45□□□□□ -1.06
LSM5-206ENST00000409987 FOXD3Q9UJU5 478 aaPredicted RBP8.45□□□□□ -1.06
LSM5-206ENST00000409987 ATXN7O15265 892 aaPredicted RBP8.44□□□□□ -1.06
LSM5-206ENST00000409987 EFSO43281 561 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 XYLBO75191 536 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 EGFRP00533 1210 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 SFSWAPQ12872 951 aaKnown RBP8.44□□□□□ -1.06
LSM5-206ENST00000409987 DBN1Q16643 649 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 FIGNL1Q6PIW4 674 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 TMEM63CQ9P1W3 806 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 PARP2Q9UGN5 583 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 HCN2Q9UL51 889 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
LSM5-206ENST00000409987 DCDC2BA2VCK2 349 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 KCNQ4P56696 695 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 MRPL58Q14197 206 aaKnown RBP8.43□□□□□ -1.06
LSM5-206ENST00000409987 ALG1LQ6GMV1 187 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 DNAJC25Q9H1X3 360 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 ELP3Q9H9T3 547 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 KCNH4Q9UQ05 1017 aa8.43□□□□□ -1.06
LSM5-206ENST00000409987 H7C1W4 665 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
LSM5-206ENST00000409987 CPNE3O75131 537 aaKnown RBP8.42□□□□□ -1.06
LSM5-206ENST00000409987 RECKO95980 971 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 NEFLP07196 543 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 SNRPBP14678 240 aaKnown RBP8.42□□□□□ -1.06
LSM5-206ENST00000409987 FGD1P98174 961 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 TNP2Q05952 138 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 USPL1Q5W0Q7 1092 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 TRIM22Q8IYM9 498 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 C11orf16Q9NQ32 467 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
LSM5-206ENST00000409987 CHRDQ9H2X0 955 aa8.41□□□□□ -1.06
LSM5-206ENST00000409987 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
LSM5-206ENST00000409987 NDFIP2Q9NV92 336 aa8.41□□□□□ -1.06
LSM5-206ENST00000409987 BNIP3LO60238 219 aa8.4□□□□□ -1.06
LSM5-206ENST00000409987 MAPTP10636 758 aaKnown RBP8.4□□□□□ -1.06
LSM5-206ENST00000409987 ITGA6P23229 1130 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms