RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 CHMLP26374 656 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 XAGE3Q8WTP9 111 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 BMP2KQ9NSY1 1161 aaPredicted RBP18.3■□□□□ 0.52
SSFA2-202ENST00000409001 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 CAVIN2O95810 425 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
SSFA2-202ENST00000409001 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
SSFA2-202ENST00000409001 MYO6Q9UM54 1294 aa18.29■□□□□ 0.52
SSFA2-202ENST00000409001 EIF2AK4Q9P2K8 1649 aaKnown RBP18.29■□□□□ 0.52
SSFA2-202ENST00000409001 KIF5CO60282 957 aa18.29■□□□□ 0.52
SSFA2-202ENST00000409001 SSRP1Q08945 709 aaKnown RBP18.29■□□□□ 0.52
SSFA2-202ENST00000409001 CTCFLQ8NI51 663 aaPredicted RBP18.29■□□□□ 0.52
SSFA2-202ENST00000409001 G2E3Q7L622 706 aa18.29■□□□□ 0.52
SSFA2-202ENST00000409001 ZMYM4Q5VZL5 1548 aa18.29■□□□□ 0.52
SSFA2-202ENST00000409001 ANKRD18BA2A2Z9 1011 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
SSFA2-202ENST00000409001 USP5P45974 858 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 CGNQ9P2M7 1197 aaKnown RBP18.28■□□□□ 0.52
SSFA2-202ENST00000409001 SYCP1Q15431 976 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 KSR2Q6VAB6 950 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 DNAJC25Q9H1X3 360 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 GOLGA6L10A6NI86 522 aa18.28■□□□□ 0.52
SSFA2-202ENST00000409001 KLF18A0A0U1RQI7 1052 aa18.27■□□□□ 0.52
SSFA2-202ENST00000409001 CASQ1P31415 396 aa18.27■□□□□ 0.52
SSFA2-202ENST00000409001 SNW1Q13573 536 aaKnown RBP18.27■□□□□ 0.52
SSFA2-202ENST00000409001 TMEM67Q5HYA8 995 aa18.27■□□□□ 0.52
SSFA2-202ENST00000409001 KIAA0556O60303 1618 aa18.27■□□□□ 0.52
SSFA2-202ENST00000409001 SHANK2Q9UPX8 1470 aa18.27■□□□□ 0.52
SSFA2-202ENST00000409001 TTC21AQ8NDW8 1320 aa18.27■□□□□ 0.52
SSFA2-202ENST00000409001 ALDH1L1O75891 902 aa18.27■□□□□ 0.52
SSFA2-202ENST00000409001 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
SSFA2-202ENST00000409001 NCOA7Q8NI08 942 aa18.27■□□□□ 0.51
SSFA2-202ENST00000409001 RRAGDQ9NQL2 400 aaPredicted RBP18.27■□□□□ 0.51
SSFA2-202ENST00000409001 POLR3GO15318 223 aaPredicted RBP18.27■□□□□ 0.51
SSFA2-202ENST00000409001 CPA1P15085 419 aa18.27■□□□□ 0.51
SSFA2-202ENST00000409001 CHRNA2Q15822 529 aa18.27■□□□□ 0.51
SSFA2-202ENST00000409001 CWF19L2Q2TBE0 894 aaKnown RBP18.27■□□□□ 0.51
SSFA2-202ENST00000409001 METAP2P50579 478 aaKnown RBP eCLIP18.26■□□□□ 0.51
SSFA2-202ENST00000409001 CAVIN4Q5BKX8 364 aa18.26■□□□□ 0.51
SSFA2-202ENST00000409001 CEP135Q66GS9 1140 aa18.26■□□□□ 0.51
SSFA2-202ENST00000409001 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
SSFA2-202ENST00000409001 Q6ZUG5 572 aa18.26■□□□□ 0.51
SSFA2-202ENST00000409001 EYA1Q99502 592 aa18.26■□□□□ 0.51
SSFA2-202ENST00000409001 INTS4Q96HW7 963 aaKnown RBP18.26■□□□□ 0.51
SSFA2-202ENST00000409001 SPATA31E1Q6ZUB1 1445 aa18.26■□□□□ 0.51
SSFA2-202ENST00000409001 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
SSFA2-202ENST00000409001 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
SSFA2-202ENST00000409001 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
SSFA2-202ENST00000409001 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 MKNK2Q9HBH9 465 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 SKILP12757 684 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 SLC5A1P13866 664 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 TXLNBQ8N3L3 684 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 CCDC148Q8NFR7 591 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 NPATQ14207 1427 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 SYT1P21579 422 aa18.25■□□□□ 0.51
SSFA2-202ENST00000409001 RNF41Q9H4P4 317 aaPredicted RBP18.25■□□□□ 0.51
SSFA2-202ENST00000409001 IQCEQ6IPM2 695 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 CRACR2AQ9BSW2 395 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 SLC26A6Q9BXS9 759 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 MCMDC2Q4G0Z9 681 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 MSH6P52701 1360 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 HSP90AA4PQ58FG1 418 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 RBSNQ9H1K0 784 aa18.24■□□□□ 0.51
SSFA2-202ENST00000409001 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
SSFA2-202ENST00000409001 TYRO3Q06418 890 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 JAKMIP3Q5VZ66 844 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
SSFA2-202ENST00000409001 NUP88Q99567 741 aaPredicted RBP18.23■□□□□ 0.51
SSFA2-202ENST00000409001 SYKP43405 635 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 GBP3Q9H0R5 595 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
SSFA2-202ENST00000409001 ERLIN2O94905 339 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 ZNF397Q8NF99 534 aaPredicted RBP18.23■□□□□ 0.51
SSFA2-202ENST00000409001 KIAA0754O94854 1291 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 NLRP5P59047 1200 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 CREB3L3Q68CJ9 461 aa18.23■□□□□ 0.51
SSFA2-202ENST00000409001 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
SSFA2-202ENST00000409001 TTC41PQ6P2S7 1318 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 SPA17Q15506 151 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 ASXL2Q76L83 1435 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
SSFA2-202ENST00000409001 PAXBP1Q9Y5B6 917 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 HS1BP3Q53T59 392 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 MRPS27Q92552 414 aaKnown RBP18.22■□□□□ 0.51
SSFA2-202ENST00000409001 SEPT11Q9NVA2 429 aaKnown RBP18.22■□□□□ 0.51
SSFA2-202ENST00000409001 FLT4P35916 1363 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 RBM5P52756 815 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSFA2-202ENST00000409001 GNG11P61952 73 aa18.22■□□□□ 0.51
SSFA2-202ENST00000409001 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
SSFA2-202ENST00000409001 AKAP4Q5JQC9 854 aa18.21■□□□□ 0.51
SSFA2-202ENST00000409001 CHST3Q7LGC8 479 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms