RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 GCKRQ14397 625 aa12.41□□□□□ -0.42
DDX39B-202ENST00000396172 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
DDX39B-202ENST00000396172 ZNF34Q8IZ26 560 aa12.41□□□□□ -0.42
DDX39B-202ENST00000396172 NIP7Q9Y221 180 aaKnown RBP eCLIP12.41□□□□□ -0.425e-52■■□□□ 13.4
DDX39B-202ENST00000396172 UBTFL1P0CB47 393 aaPredicted RBP12.4□□□□□ -0.42
DDX39B-202ENST00000396172 AMIGO3Q86WK7 504 aa12.4□□□□□ -0.42
DDX39B-202ENST00000396172 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
DDX39B-202ENST00000396172 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
DDX39B-202ENST00000396172 UTYO14607 1347 aa12.4□□□□□ -0.42
DDX39B-202ENST00000396172 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.43
DDX39B-202ENST00000396172 GYS1P13807 737 aa12.4□□□□□ -0.43
DDX39B-202ENST00000396172 NLRP10Q86W26 655 aa12.4□□□□□ -0.43
DDX39B-202ENST00000396172 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.43
DDX39B-202ENST00000396172 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.43
DDX39B-202ENST00000396172 EXOC6Q8TAG9 804 aa12.4□□□□□ -0.43
DDX39B-202ENST00000396172 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.43
DDX39B-202ENST00000396172 SETDB2Q96T68 719 aa12.4□□□□□ -0.43
DDX39B-202ENST00000396172 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-202ENST00000396172 GPTP24298 496 aa12.39□□□□□ -0.43
DDX39B-202ENST00000396172 CDHR2Q9BYE9 1310 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 GNAI2P04899 355 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-202ENST00000396172 ZBTB38Q8NAP3 1195 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-202ENST00000396172 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 SPEF2Q9C093 1822 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 RIC1Q4ADV7 1423 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 KIF13BQ9NQT8 1826 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 MEIS3Q99687 375 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 UTP14AQ9BVJ6 771 aaKnown RBP12.38□□□□□ -0.43
DDX39B-202ENST00000396172 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
DDX39B-202ENST00000396172 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
DDX39B-202ENST00000396172 TBC1D9BQ66K14 1250 aa12.37□□□□□ -0.43
DDX39B-202ENST00000396172 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
DDX39B-202ENST00000396172 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
DDX39B-202ENST00000396172 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
DDX39B-202ENST00000396172 DLEC1Q9Y238 1755 aa12.36□□□□□ -0.43
DDX39B-202ENST00000396172 H7C1W4 665 aa12.36□□□□□ -0.43
DDX39B-202ENST00000396172 NPHP1O15259 732 aa12.36□□□□□ -0.43
DDX39B-202ENST00000396172 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-202ENST00000396172 CACNA1SQ13698 1873 aa12.35□□□□□ -0.43
DDX39B-202ENST00000396172 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
DDX39B-202ENST00000396172 NTSR2O95665 410 aa12.35□□□□□ -0.43
DDX39B-202ENST00000396172 NFIXQ14938 502 aa12.35□□□□□ -0.43
DDX39B-202ENST00000396172 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
DDX39B-202ENST00000396172 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
DDX39B-202ENST00000396172 NBPF7P0C2Y1 421 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-202ENST00000396172 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-202ENST00000396172 HMMRO75330 724 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 ST5P78524 1137 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-202ENST00000396172 CNBD1Q8NA66 436 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
DDX39B-202ENST00000396172 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 TM4SF1P30408 202 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 CASP7P55210 303 aa12.34□□□□□ -0.43
DDX39B-202ENST00000396172 IRS4O14654 1257 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-202ENST00000396172 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
DDX39B-202ENST00000396172 COL11A2P13942 1736 aaPredicted RBP12.32□□□□□ -0.44
DDX39B-202ENST00000396172 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
DDX39B-202ENST00000396172 PDE8AO60658 829 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 MTX1Q13505 466 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 SUCLG2Q96I99 432 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 SERPINB2P05120 415 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 MMP10P09238 476 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
DDX39B-202ENST00000396172 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 ANKRD44Q8N8A2 993 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
DDX39B-202ENST00000396172 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-202ENST00000396172 CCDC136Q96JN2 1154 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-202ENST00000396172 BICC1Q9H694 974 aaKnown RBP12.31□□□□□ -0.44
DDX39B-202ENST00000396172 LRP5O75197 1615 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 TAF1P21675 1872 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 RTL9Q8NET4 1388 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 POLD1P28340 1107 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 CTSWP56202 376 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 DDR1Q08345 913 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-202ENST00000396172 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
DDX39B-202ENST00000396172 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
DDX39B-202ENST00000396172 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-202ENST00000396172 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
DDX39B-202ENST00000396172 PRR5LQ6MZQ0 368 aa12.3□□□□□ -0.44
DDX39B-202ENST00000396172 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
DDX39B-202ENST00000396172 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
DDX39B-202ENST00000396172 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
DDX39B-202ENST00000396172 CCDC152Q4G0S7 254 aa12.29□□□□□ -0.44
DDX39B-202ENST00000396172 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
DDX39B-202ENST00000396172 BRCA1P38398 1863 aaKnown RBP12.29□□□□□ -0.44
DDX39B-202ENST00000396172 SRGAP3O43295 1099 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms