RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 KIF20AO95235 890 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 RLBP1P12271 317 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 MTIF2P46199 727 aaKnown RBP9.12□□□□□ -0.95
TRPS1-203ENST00000395715 ZSCAN31Q96LW9 406 aaPredicted RBP9.12□□□□□ -0.95
TRPS1-203ENST00000395715 OPHN1O60890 802 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 CCT6BQ92526 530 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 PRKRIP1Q9H875 184 aaPredicted RBP9.12□□□□□ -0.95
TRPS1-203ENST00000395715 SURF6O75683 361 aaKnown RBP9.12□□□□□ -0.95
TRPS1-203ENST00000395715 HSPA1LP34931 641 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 NUTM2GQ5VZR2 741 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 ARHGAP24Q8N264 748 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 ANKRD30AQ9BXX3 1397 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 MUM1Q2TAK8 710 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 ZNF354CQ86Y25 554 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 NUCKS1Q9H1E3 243 aaKnown RBP9.12□□□□□ -0.95
TRPS1-203ENST00000395715 TSPYL4Q9UJ04 414 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 CCDC62Q6P9F0 684 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 ATP5DP30049 168 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 RAPGEF4Q8WZA2 1011 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 CRCPO75575 148 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 TMEM87AQ8NBN3 555 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 OGFRQ9NZT2 677 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 CNNM3Q8NE01 707 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 MRPL46Q9H2W6 279 aaKnown RBP9.11□□□□□ -0.95
TRPS1-203ENST00000395715 GIMAP4Q9NUV9 329 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 FRMD4BQ9Y2L6 1034 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 PRPHP41219 470 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 USP5P45974 858 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 ZNF131P52739 623 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 GNL3LQ9NVN8 582 aaKnown RBP9.11□□□□□ -0.95
TRPS1-203ENST00000395715 PHACTR2O75167 634 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 PUF60Q9UHX1 559 aaKnown RBP9.11□□□□□ -0.95
TRPS1-203ENST00000395715 FCHSD2O94868 740 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 STX1AQ16623 288 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 JAKMIP2Q96AA8 810 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 PANK3Q9H999 370 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 CARMIL1Q5VZK9 1371 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 ATP6V1E1P36543 226 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 TRIM68Q6AZZ1 485 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 CCDC65Q8IXS2 484 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 BICD1Q96G01 975 aa9.11□□□□□ -0.95
TRPS1-203ENST00000395715 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-203ENST00000395715 ARHGAP25P42331 645 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 CHMP4BP1P59074 171 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 GCC1Q96CN9 775 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 RAB34Q9BZG1 259 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 STRN4Q9NRL3 753 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 IGSF3O75054 1194 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 TBC1D5Q92609 795 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 ANKFY1Q9P2R3 1169 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 SLMAPQ14BN4 828 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 CTCFLQ8NI51 663 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-203ENST00000395715 SCAND2PQ9GZW5 306 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-203ENST00000395715 IRX4P78413 519 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 HDXQ7Z353 690 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 CCDC89Q8N998 374 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 SEC63Q9UGP8 760 aaKnown RBP9.1□□□□□ -0.95
TRPS1-203ENST00000395715 TERF1P54274 439 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 SATB2Q9UPW6 733 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 CNGA1P29973 690 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 GNAI1P63096 354 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 SYNCQ9H7C4 482 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 TCERG1LQ5VWI1 586 aa9.1□□□□□ -0.95
TRPS1-203ENST00000395715 SPATS2Q86XZ4 545 aaKnown RBP9.1□□□□□ -0.95
TRPS1-203ENST00000395715 SKOR1P84550 965 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 AFAP1L1Q8TED9 768 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 EVC2Q86UK5 1308 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 USP37Q86T82 979 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 RBM42Q9BTD8 480 aaKnown RBP9.09□□□□□ -0.95
TRPS1-203ENST00000395715 MRFAP1Q9Y605 127 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 CCDC40Q4G0X9 1142 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 ZSCAN25Q6NSZ9 544 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 UBLCP1Q8WVY7 318 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-203ENST00000395715 JAKMIP1Q96N16 626 aaKnown RBP9.09□□□□□ -0.95
TRPS1-203ENST00000395715 NKIRAS1Q9NYS0 192 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 CASTP20810 708 aaKnown RBP9.09□□□□□ -0.95
TRPS1-203ENST00000395715 KRT32Q14532 448 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 ABTB1Q969K4 478 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-203ENST00000395715 RAB11FIP4Q86YS3 637 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 CKAP2LQ8IYA6 745 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 PHAXQ9H814 394 aaKnown RBP9.09□□□□□ -0.95
TRPS1-203ENST00000395715 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-203ENST00000395715 NDUFAB1O14561 156 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 GNAI3P08754 354 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 TMED1Q13445 227 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 PALMDQ9NP74 551 aa9.09□□□□□ -0.95
TRPS1-203ENST00000395715 DNAI1Q9UI46 699 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 ZBTB41Q5SVQ8 909 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 RUNDC1Q96C34 613 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 LUC7L3O95232 432 aaKnown RBP9.08□□□□□ -0.96
TRPS1-203ENST00000395715 GFAPP14136 432 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 CYLC1P35663 651 aaPredicted RBP9.08□□□□□ -0.96
TRPS1-203ENST00000395715 VAV2P52735 878 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 THEGQ9P2T0 379 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 POLD1P28340 1107 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 PSPC1Q8WXF1 523 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms