RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HSP90AA4PQ58FG1 418 aa15.68■□□□□ 0.1
NFKB1-202ENST00000394820 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
NFKB1-202ENST00000394820 TNNT1P13805 278 aa15.68■□□□□ 0.1
NFKB1-202ENST00000394820 ATF3P18847 181 aa15.68■□□□□ 0.1
NFKB1-202ENST00000394820 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
NFKB1-202ENST00000394820 ZSCAN22P10073 491 aaPredicted RBP15.67■□□□□ 0.1
NFKB1-202ENST00000394820 LRMPQ12912 555 aa15.67■□□□□ 0.1
NFKB1-202ENST00000394820 MAP3K11Q16584 847 aa15.67■□□□□ 0.1
NFKB1-202ENST00000394820 AXIN2Q9Y2T1 843 aa15.67■□□□□ 0.1
NFKB1-202ENST00000394820 ANKRD26Q9UPS8 1709 aa15.67■□□□□ 0.1
NFKB1-202ENST00000394820 CCT2P78371 535 aaKnown RBP15.67■□□□□ 0.1
NFKB1-202ENST00000394820 TTLL5Q6EMB2 1281 aa15.67■□□□□ 0.1
NFKB1-202ENST00000394820 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
NFKB1-202ENST00000394820 NRDCO43847 1150 aa15.66■□□□□ 0.1
NFKB1-202ENST00000394820 ME1P48163 572 aa15.66■□□□□ 0.1
NFKB1-202ENST00000394820 BLOC1S2Q6QNY1 142 aa15.66■□□□□ 0.1
NFKB1-202ENST00000394820 DNAJC25Q9H1X3 360 aa15.66■□□□□ 0.1
NFKB1-202ENST00000394820 HTATSF1O43719 755 aaKnown RBP15.66■□□□□ 0.1
NFKB1-202ENST00000394820 RGS12O14924 1447 aa15.66■□□□□ 0.1
NFKB1-202ENST00000394820 RIMS1Q86UR5 1692 aaKnown RBP15.66■□□□□ 0.1
NFKB1-202ENST00000394820 NFATC2IPQ8NCF5 419 aa15.66■□□□□ 0.1
NFKB1-202ENST00000394820 ATP5J2-PTCD1G3V325 749 aa15.65■□□□□ 0.1
NFKB1-202ENST00000394820 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
NFKB1-202ENST00000394820 MTERF4Q7Z6M4 381 aaKnown RBP15.65■□□□□ 0.1
NFKB1-202ENST00000394820 CHMP4CQ96CF2 233 aa15.65■□□□□ 0.1
NFKB1-202ENST00000394820 RIOK3O14730 519 aaKnown RBP15.65■□□□□ 0.1
NFKB1-202ENST00000394820 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
NFKB1-202ENST00000394820 ANO6Q4KMQ2 910 aa15.65■□□□□ 0.1
NFKB1-202ENST00000394820 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
NFKB1-202ENST00000394820 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
NFKB1-202ENST00000394820 CCDC73Q6ZRK6 1079 aa15.65■□□□□ 0.1
NFKB1-202ENST00000394820 KIF1BPQ96EK5 621 aa15.65■□□□□ 0.1
NFKB1-202ENST00000394820 AKAP4Q5JQC9 854 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 CHST3Q7LGC8 479 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 RASEFQ8IZ41 740 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 DLG5Q8TDM6 1919 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 ZNF165P49910 485 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 HSPA2P54652 639 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 UBE2HP62256 183 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 MYD88Q99836 296 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 IL25Q9H293 177 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
NFKB1-202ENST00000394820 ITSN1Q15811 1721 aa15.63■□□□□ 0.09
NFKB1-202ENST00000394820 NAA30Q147X3 362 aaPredicted RBP15.63■□□□□ 0.09
NFKB1-202ENST00000394820 PDILTQ8N807 584 aa15.63■□□□□ 0.09
NFKB1-202ENST00000394820 PYCARDQ9ULZ3 195 aa15.63■□□□□ 0.09
NFKB1-202ENST00000394820 EDC3Q96F86 508 aaKnown RBP15.63■□□□□ 0.09
NFKB1-202ENST00000394820 BRD1O95696 1058 aa15.63■□□□□ 0.09
NFKB1-202ENST00000394820 F13A1P00488 732 aa15.63■□□□□ 0.09
NFKB1-202ENST00000394820 TNNT3P45378 269 aaPredicted RBP15.63■□□□□ 0.09
NFKB1-202ENST00000394820 NEXNQ0ZGT2 675 aa15.63■□□□□ 0.09
NFKB1-202ENST00000394820 RNF20Q5VTR2 975 aa15.63■□□□□ 0.09
NFKB1-202ENST00000394820 NRBP1Q9UHY1 535 aa15.62■□□□□ 0.09
NFKB1-202ENST00000394820 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
NFKB1-202ENST00000394820 KINO60870 393 aaKnown RBP15.62■□□□□ 0.09
NFKB1-202ENST00000394820 DDX58O95786 925 aaKnown RBP15.62■□□□□ 0.09
NFKB1-202ENST00000394820 TATP17735 454 aaPredicted RBP15.62■□□□□ 0.09
NFKB1-202ENST00000394820 APPP05067 770 aa15.61■□□□□ 0.09
NFKB1-202ENST00000394820 STRN4Q9NRL3 753 aa15.61■□□□□ 0.09
NFKB1-202ENST00000394820 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
NFKB1-202ENST00000394820 BCL2L12Q9HB09 334 aa15.61■□□□□ 0.09
NFKB1-202ENST00000394820 KDRP35968 1356 aa15.61■□□□□ 0.09
NFKB1-202ENST00000394820 POLR3GO15318 223 aaPredicted RBP15.61■□□□□ 0.09
NFKB1-202ENST00000394820 BEND3Q5T5X7 828 aa15.61■□□□□ 0.09
NFKB1-202ENST00000394820 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
NFKB1-202ENST00000394820 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
NFKB1-202ENST00000394820 WASHC4Q2M389 1173 aa15.6■□□□□ 0.09
NFKB1-202ENST00000394820 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
NFKB1-202ENST00000394820 PES1O00541 588 aaKnown RBP15.59■□□□□ 0.09
NFKB1-202ENST00000394820 CPLX1O14810 134 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 LARGE1O95461 756 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 FAM227BQ96M60 508 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 CCDC94Q9BW85 323 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-202ENST00000394820 SNX14Q9Y5W7 946 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 LETM1O95202 739 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-202ENST00000394820 ADCK5Q3MIX3 580 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-202ENST00000394820 UBR1Q8IWV7 1749 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 GIGYF1O75420 1035 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-202ENST00000394820 LIG1P18858 919 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
NFKB1-202ENST00000394820 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
NFKB1-202ENST00000394820 ZNF500O60304 480 aaPredicted RBP15.58■□□□□ 0.09
NFKB1-202ENST00000394820 ARHGEF25Q86VW2 580 aa15.58■□□□□ 0.09
NFKB1-202ENST00000394820 RBM8AQ9Y5S9 174 aaKnown RBP15.58■□□□□ 0.09
NFKB1-202ENST00000394820 PEAK1Q9H792 1746 aa15.58■□□□□ 0.09
NFKB1-202ENST00000394820 POLR3DP05423 398 aaPredicted RBP15.58■□□□□ 0.08
NFKB1-202ENST00000394820 HSP90AB4PQ58FF6 505 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 REREQ9P2R6 1566 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 TYRO3Q06418 890 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 KSR2Q6VAB6 950 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 SUCLG2Q96I99 432 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 ZSWIM4Q9H7M6 989 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 SSH2Q76I76 1423 aa15.58■□□□□ 0.08
NFKB1-202ENST00000394820 MCM5P33992 734 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 PTH1RQ03431 593 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 UBE3BQ7Z3V4 1068 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 GLRX3O76003 335 aaKnown RBP15.57■□□□□ 0.08
NFKB1-202ENST00000394820 CABP4P57796 275 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms