RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 GRPEL1Q9HAV7 217 aa18.52■□□□□ 0.56
UBE2D3-207ENST00000394801 NBPF26B4DH59 902 aa18.52■□□□□ 0.55
UBE2D3-207ENST00000394801 PTPN12Q05209 780 aaKnown RBP18.52■□□□□ 0.55
UBE2D3-207ENST00000394801 NBPF14Q5TI25 921 aa18.52■□□□□ 0.55
UBE2D3-207ENST00000394801 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.55
UBE2D3-207ENST00000394801 NBPF15Q8N660 670 aa18.52■□□□□ 0.55
UBE2D3-207ENST00000394801 SIL1Q9H173 461 aa18.52■□□□□ 0.55
UBE2D3-207ENST00000394801 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
UBE2D3-207ENST00000394801 IL2RBP14784 551 aa18.51■□□□□ 0.55
UBE2D3-207ENST00000394801 KLHDC4Q8TBB5 520 aa18.51■□□□□ 0.55
UBE2D3-207ENST00000394801 TLR7Q9NYK1 1049 aaKnown RBP18.5■□□□□ 0.55
UBE2D3-207ENST00000394801 PTH1RQ03431 593 aa18.5■□□□□ 0.55
UBE2D3-207ENST00000394801 UBE3BQ7Z3V4 1068 aa18.5■□□□□ 0.55
UBE2D3-207ENST00000394801 GAS2L3Q86XJ1 694 aa18.5■□□□□ 0.55
UBE2D3-207ENST00000394801 TM6SF1Q9BZW5 370 aa18.5■□□□□ 0.55
UBE2D3-207ENST00000394801 KCPQ6ZWJ8 1503 aa18.5■□□□□ 0.55
UBE2D3-207ENST00000394801 PAPPAQ13219 1627 aa18.5■□□□□ 0.55
UBE2D3-207ENST00000394801 ABCA3Q99758 1704 aa18.49■□□□□ 0.55
UBE2D3-207ENST00000394801 A0A087WZG4 1122 aa18.49■□□□□ 0.55
UBE2D3-207ENST00000394801 SOCS7O14512 581 aa18.49■□□□□ 0.55
UBE2D3-207ENST00000394801 NECTIN1Q15223 517 aa18.49■□□□□ 0.55
UBE2D3-207ENST00000394801 H7C1W4 665 aa18.49■□□□□ 0.55
UBE2D3-207ENST00000394801 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
UBE2D3-207ENST00000394801 ATP5J2-PTCD1G3V325 749 aa18.48■□□□□ 0.55
UBE2D3-207ENST00000394801 PTCD1O75127 700 aaKnown RBP18.48■□□□□ 0.55
UBE2D3-207ENST00000394801 CCDC171Q6TFL3 1326 aa18.48■□□□□ 0.55
UBE2D3-207ENST00000394801 MAP4K1Q92918 833 aa18.48■□□□□ 0.55
UBE2D3-207ENST00000394801 PANK2Q9BZ23 570 aa18.48■□□□□ 0.55
UBE2D3-207ENST00000394801 SHANK3Q9BYB0 1731 aa18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 TNS2Q63HR2 1409 aa18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 LIMCH1Q9UPQ0 1083 aa18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 ATP5JP18859 108 aa18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 AK2P54819 239 aa18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 JARID2Q92833 1246 aaPredicted RBP18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 ARXQ96QS3 562 aa18.47■□□□□ 0.55
UBE2D3-207ENST00000394801 NMIQ13287 307 aaPredicted RBP18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 TNNI3KQ59H18 835 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 ZSWIM6Q9HCJ5 1215 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 FPGT-TNNI3KV9GXZ4 949 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 PRPF40AO75400 957 aaKnown RBP18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 ZNF445P59923 1031 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 VPS53Q5VIR6 699 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 RUFY3Q7L099 469 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 UBE2Q2Q8WVN8 375 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 FAM227BQ96M60 508 aa18.46■□□□□ 0.55
UBE2D3-207ENST00000394801 NUP188Q5SRE5 1749 aa18.46■□□□□ 0.54
UBE2D3-207ENST00000394801 FOXO4P98177 505 aa18.45■□□□□ 0.54
UBE2D3-207ENST00000394801 PRPF40BQ6NWY9 871 aaKnown RBP18.45■□□□□ 0.54
UBE2D3-207ENST00000394801 TTLL7Q6ZT98 887 aa18.45■□□□□ 0.54
UBE2D3-207ENST00000394801 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
UBE2D3-207ENST00000394801 CASTP20810 708 aaKnown RBP18.45■□□□□ 0.54
UBE2D3-207ENST00000394801 TFCP2Q12800 502 aa18.45■□□□□ 0.54
UBE2D3-207ENST00000394801 A1BGP04217 495 aa18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 FSD1Q9BTV5 496 aa18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 CWC25Q9NXE8 425 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 MED23Q9ULK4 1368 aa18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 NHSL1Q5SYE7 1610 aa18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 LMBR1LQ6UX01 489 aa18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 DDX54Q8TDD1 881 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 RBM8AQ9Y5S9 174 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-207ENST00000394801 JCADQ9P266 1359 aa18.43■□□□□ 0.54
UBE2D3-207ENST00000394801 WDR33Q9C0J8 1336 aaKnown RBP18.43■□□□□ 0.54
UBE2D3-207ENST00000394801 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
UBE2D3-207ENST00000394801 CCDC191Q8NCU4 936 aa18.43■□□□□ 0.54
UBE2D3-207ENST00000394801 GPT2Q8TD30 523 aa18.43■□□□□ 0.54
UBE2D3-207ENST00000394801 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 EVA1CP58658 441 aa18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 CREB3L3Q68CJ9 461 aa18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 CYP46A1Q9Y6A2 500 aa18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 JAKMIP1Q96N16 626 aaKnown RBP18.42■□□□□ 0.54
UBE2D3-207ENST00000394801 STRN4Q9NRL3 753 aa18.41■□□□□ 0.54
UBE2D3-207ENST00000394801 PDRG1Q9NUG6 133 aa18.41■□□□□ 0.54
UBE2D3-207ENST00000394801 RPAP1Q9BWH6 1393 aaPredicted RBP18.41■□□□□ 0.54
UBE2D3-207ENST00000394801 ZSCAN23Q3MJ62 389 aa18.41■□□□□ 0.54
UBE2D3-207ENST00000394801 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
UBE2D3-207ENST00000394801 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
UBE2D3-207ENST00000394801 TJP1Q07157 1748 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 TSGA10IPQ3SY00 556 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 ILDR2Q71H61 639 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 SH2B1Q9NRF2 756 aaPredicted RBP18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 SLC27A2O14975 620 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 MBD3O95983 291 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 CPA1P15085 419 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 FOXD4L5Q5VV16 416 aaPredicted RBP18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 ATG9AQ7Z3C6 839 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 FOXD4L4Q8WXT5 416 aaPredicted RBP18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 HAUS7Q99871 368 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
UBE2D3-207ENST00000394801 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 PSMA5P28066 241 aa18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 DBNDD2Q9BQY9 259 aa18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 RNF20Q5VTR2 975 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms