RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
PC-201ENST00000393955 RBM10P98175 930 aaKnown RBP11.65□□□□□ -0.54
PC-201ENST00000393955 RNF214Q8ND24 703 aa11.65□□□□□ -0.54
PC-201ENST00000393955 HELBQ8NG08 1087 aaPredicted RBP11.65□□□□□ -0.54
PC-201ENST00000393955 ADCY9O60503 1353 aa11.65□□□□□ -0.55
PC-201ENST00000393955 IL2RBP14784 551 aa11.64□□□□□ -0.55
PC-201ENST00000393955 ATP2B1P20020 1258 aa11.64□□□□□ -0.55
PC-201ENST00000393955 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
PC-201ENST00000393955 RHPN1Q8TCX5 695 aa11.64□□□□□ -0.55
PC-201ENST00000393955 JAKMIP1Q96N16 626 aaKnown RBP11.64□□□□□ -0.55
PC-201ENST00000393955 ZNF219Q9P2Y4 722 aaPredicted RBP11.64□□□□□ -0.55
PC-201ENST00000393955 SLC4A8Q2Y0W8 1093 aa11.64□□□□□ -0.55
PC-201ENST00000393955 HSP90AB3PQ58FF7 597 aa11.64□□□□□ -0.55
PC-201ENST00000393955 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
PC-201ENST00000393955 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
PC-201ENST00000393955 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
PC-201ENST00000393955 RGPD5Q99666 1765 aa11.64□□□□□ -0.55
PC-201ENST00000393955 MED1Q15648 1581 aaPredicted RBP11.64□□□□□ -0.55
PC-201ENST00000393955 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
PC-201ENST00000393955 CPA1P15085 419 aa11.64□□□□□ -0.55
PC-201ENST00000393955 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
PC-201ENST00000393955 L1TD1Q5T7N2 865 aaKnown RBP11.64□□□□□ -0.55
PC-201ENST00000393955 NFXL1Q6ZNB6 911 aa11.64□□□□□ -0.55
PC-201ENST00000393955 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
PC-201ENST00000393955 PI4K2BQ8TCG2 481 aa11.64□□□□□ -0.55
PC-201ENST00000393955 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
PC-201ENST00000393955 PRPF40AO75400 957 aaKnown RBP11.63□□□□□ -0.55
PC-201ENST00000393955 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
PC-201ENST00000393955 CLEC17AQ6ZS10 378 aa11.63□□□□□ -0.55
PC-201ENST00000393955 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
PC-201ENST00000393955 DRC7Q8IY82 874 aa11.63□□□□□ -0.55
PC-201ENST00000393955 TMX3Q96JJ7 454 aa11.63□□□□□ -0.55
PC-201ENST00000393955 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
PC-201ENST00000393955 ANKARQ7Z5J8 1434 aa11.63□□□□□ -0.55
PC-201ENST00000393955 CPLX1O14810 134 aa11.63□□□□□ -0.55
PC-201ENST00000393955 FIBPO43427 364 aa11.63□□□□□ -0.55
PC-201ENST00000393955 CREBRFQ8IUR6 639 aa11.63□□□□□ -0.55
PC-201ENST00000393955 SF3A1Q15459 793 aaKnown RBP11.63□□□□□ -0.55
PC-201ENST00000393955 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
PC-201ENST00000393955 SSH3Q8TE77 659 aa11.63□□□□□ -0.55
PC-201ENST00000393955 TCHHQ07283 1943 aa11.62□□□□□ -0.55
PC-201ENST00000393955 FAM89AQ96GI7 184 aa11.62□□□□□ -0.55
PC-201ENST00000393955 GRM8O00222 908 aa11.62□□□□□ -0.55
PC-201ENST00000393955 GOLIM4O00461 696 aa11.62□□□□□ -0.55
PC-201ENST00000393955 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
PC-201ENST00000393955 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
PC-201ENST00000393955 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
PC-201ENST00000393955 DDX11Q96FC9 970 aa11.62□□□□□ -0.55
PC-201ENST00000393955 CACNA1FO60840 1977 aa11.62□□□□□ -0.55
PC-201ENST00000393955 HTATSF1O43719 755 aaKnown RBP11.62□□□□□ -0.55
PC-201ENST00000393955 CASTP20810 708 aaKnown RBP11.62□□□□□ -0.55
PC-201ENST00000393955 DDB1Q16531 1140 aa11.62□□□□□ -0.55
PC-201ENST00000393955 CCDC158Q5M9N0 1113 aa11.62□□□□□ -0.55
PC-201ENST00000393955 CAVIN1Q6NZI2 390 aaKnown RBP11.62□□□□□ -0.55
PC-201ENST00000393955 ERC1Q8IUD2 1116 aa11.62□□□□□ -0.55
PC-201ENST00000393955 POLA2Q14181 598 aa11.61□□□□□ -0.55
PC-201ENST00000393955 RALYLQ86SE5 291 aaKnown RBP11.61□□□□□ -0.55
PC-201ENST00000393955 PIBF1Q8WXW3 757 aa11.61□□□□□ -0.55
PC-201ENST00000393955 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
PC-201ENST00000393955 MRE11P49959 708 aa11.61□□□□□ -0.55
PC-201ENST00000393955 KAZALD1Q96I82 304 aa11.61□□□□□ -0.55
PC-201ENST00000393955 ZNF594Q96JF6 807 aaPredicted RBP11.61□□□□□ -0.55
PC-201ENST00000393955 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
PC-201ENST00000393955 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
PC-201ENST00000393955 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
PC-201ENST00000393955 ATP6V1AP38606 617 aa11.61□□□□□ -0.55
PC-201ENST00000393955 HAND2P61296 217 aa11.61□□□□□ -0.55
PC-201ENST00000393955 TRDNQ13061 729 aa11.61□□□□□ -0.55
PC-201ENST00000393955 LDHAL6AQ6ZMR3 332 aa11.61□□□□□ -0.55
PC-201ENST00000393955 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
PC-201ENST00000393955 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
PC-201ENST00000393955 FAM98CQ17RN3 349 aaKnown RBP11.6□□□□□ -0.55
PC-201ENST00000393955 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
PC-201ENST00000393955 ARHGEF25Q86VW2 580 aa11.6□□□□□ -0.55
PC-201ENST00000393955 DNAJC10Q8IXB1 793 aa11.6□□□□□ -0.55
PC-201ENST00000393955 JAG2Q9Y219 1238 aa11.6□□□□□ -0.55
PC-201ENST00000393955 CHGBP05060 677 aa11.6□□□□□ -0.55
PC-201ENST00000393955 CCDC82Q8N4S0 544 aa11.6□□□□□ -0.55
PC-201ENST00000393955 TMEM63CQ9P1W3 806 aa11.6□□□□□ -0.55
PC-201ENST00000393955 GLRX3O76003 335 aaKnown RBP11.59□□□□□ -0.55
PC-201ENST00000393955 IFIT1P09914 478 aaKnown RBP11.59□□□□□ -0.55
PC-201ENST00000393955 TIMM10P62072 90 aa11.59□□□□□ -0.55
PC-201ENST00000393955 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
PC-201ENST00000393955 EDC3Q96F86 508 aaKnown RBP11.59□□□□□ -0.55
PC-201ENST00000393955 DCAF5Q96JK2 942 aa11.59□□□□□ -0.55
PC-201ENST00000393955 RBSNQ9H1K0 784 aa11.59□□□□□ -0.55
PC-201ENST00000393955 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
PC-201ENST00000393955 NPHP4O75161 1426 aaPredicted RBP11.59□□□□□ -0.55
PC-201ENST00000393955 CCDC83Q8IWF9 413 aa11.59□□□□□ -0.55
PC-201ENST00000393955 TOM1O60784 492 aa11.58□□□□□ -0.55
PC-201ENST00000393955 LARGE1O95461 756 aa11.58□□□□□ -0.55
PC-201ENST00000393955 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.55
PC-201ENST00000393955 ZSCAN23Q3MJ62 389 aa11.58□□□□□ -0.55
PC-201ENST00000393955 ECHDC1Q9NTX5 307 aa11.58□□□□□ -0.55
PC-201ENST00000393955 TAF6LQ9Y6J9 622 aa11.58□□□□□ -0.55
PC-201ENST00000393955 LMO7Q8WWI1 1683 aa11.58□□□□□ -0.56
PC-201ENST00000393955 DHX16O60231 1041 aaKnown RBP11.58□□□□□ -0.56
PC-201ENST00000393955 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
PC-201ENST00000393955 TLR7Q9NYK1 1049 aaKnown RBP11.58□□□□□ -0.56
PC-201ENST00000393955 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms