RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 DICER1Q9UPY3 1922 aaKnown RBP29.08■■■□□ 2.25
CCDC107-203ENST00000378407 UTP14AQ9BVJ6 771 aaKnown RBP29.07■■■□□ 2.24
CCDC107-203ENST00000378407 DDX21Q9NR30 783 aaKnown RBP eCLIP29.07■■■□□ 2.24
CCDC107-203ENST00000378407 ZEB1P37275 1124 aaPredicted RBP29.06■■■□□ 2.24
CCDC107-203ENST00000378407 RBM17Q96I25 401 aaKnown RBP29.06■■■□□ 2.24
CCDC107-203ENST00000378407 CHPF2Q9P2E5 772 aa29.06■■■□□ 2.24
CCDC107-203ENST00000378407 WDR90Q96KV7 1748 aa29.06■■■□□ 2.24
CCDC107-203ENST00000378407 APAF1O14727 1248 aa29.04■■■□□ 2.24
CCDC107-203ENST00000378407 DDNO94850 711 aaPredicted RBP29.04■■■□□ 2.24
CCDC107-203ENST00000378407 CALD1Q05682 793 aaKnown RBP29.04■■■□□ 2.24
CCDC107-203ENST00000378407 CFAP44Q96MT7 982 aa29.04■■■□□ 2.24
CCDC107-203ENST00000378407 NLRP3Q96P20 1036 aa29.04■■■□□ 2.24
CCDC107-203ENST00000378407 HOXB7P09629 217 aa29.03■■■□□ 2.24
CCDC107-203ENST00000378407 TMX4Q9H1E5 349 aaPredicted RBP29.03■■■□□ 2.24
CCDC107-203ENST00000378407 CC2D2BQ6DHV5 1058 aa29.02■■■□□ 2.24
CCDC107-203ENST00000378407 RNF123Q5XPI4 1314 aa29.01■■■□□ 2.23
CCDC107-203ENST00000378407 PPEF1O14829 653 aaPredicted RBP29.01■■■□□ 2.23
CCDC107-203ENST00000378407 HOXA10P31260 410 aaPredicted RBP29.01■■■□□ 2.23
CCDC107-203ENST00000378407 IARSP41252 1262 aaKnown RBP29.01■■■□□ 2.23
CCDC107-203ENST00000378407 SYNE4Q8N205 404 aa29.01■■■□□ 2.23
CCDC107-203ENST00000378407 TCERG1O14776 1098 aaKnown RBP29■■■□□ 2.23
CCDC107-203ENST00000378407 HTRA3P83110 453 aa29■■■□□ 2.23
CCDC107-203ENST00000378407 MBIPQ9NS73 344 aa29■■■□□ 2.23
CCDC107-203ENST00000378407 DBF4Q9UBU7 674 aaPredicted RBP29■■■□□ 2.23
CCDC107-203ENST00000378407 ANKRD36CQ5JPF3 1778 aa29■■■□□ 2.23
CCDC107-203ENST00000378407 IQCA1LA6NCM1 817 aa28.99■■■□□ 2.23
CCDC107-203ENST00000378407 DUSP27Q5VZP5 1158 aa28.99■■■□□ 2.23
CCDC107-203ENST00000378407 NLRP10Q86W26 655 aa28.99■■■□□ 2.23
CCDC107-203ENST00000378407 CRAMP1Q96RY5 1269 aa28.99■■■□□ 2.23
CCDC107-203ENST00000378407 POTECB2RU33 542 aa28.98■■■□□ 2.23
CCDC107-203ENST00000378407 TCIRG1Q13488 830 aa28.98■■■□□ 2.23
CCDC107-203ENST00000378407 C3orf67Q6ZVT6 689 aa28.98■■■□□ 2.23
CCDC107-203ENST00000378407 JDP2Q8WYK2 163 aa28.98■■■□□ 2.23
CCDC107-203ENST00000378407 PSMD1Q99460 953 aa28.98■■■□□ 2.23
CCDC107-203ENST00000378407 IFT57Q9NWB7 429 aa28.98■■■□□ 2.23
CCDC107-203ENST00000378407 TRMT112Q9UI30 125 aaKnown RBP28.98■■■□□ 2.23
CCDC107-203ENST00000378407 GNAI1P63096 354 aa28.97■■■□□ 2.23
CCDC107-203ENST00000378407 GRIPAP1Q4V328 841 aa28.97■■■□□ 2.23
CCDC107-203ENST00000378407 ZNF541Q9H0D2 1346 aa28.96■■■□□ 2.23
CCDC107-203ENST00000378407 SH3TC1Q8TE82 1336 aa28.95■■■□□ 2.23
CCDC107-203ENST00000378407 PLBD2Q8NHP8 589 aa28.95■■■□□ 2.22
CCDC107-203ENST00000378407 HYPKQ9NX55 129 aa28.95■■■□□ 2.22
CCDC107-203ENST00000378407 HCLS1P14317 486 aaPredicted RBP28.94■■■□□ 2.22
CCDC107-203ENST00000378407 SLC10A5Q5PT55 438 aa28.94■■■□□ 2.22
CCDC107-203ENST00000378407 ANKRD13DQ6ZTN6 518 aa28.94■■■□□ 2.22
CCDC107-203ENST00000378407 DNAJC5GQ8N7S2 189 aa28.94■■■□□ 2.22
CCDC107-203ENST00000378407 ZNF428Q96B54 188 aa28.94■■■□□ 2.22
CCDC107-203ENST00000378407 ABCC4O15439 1325 aa28.93■■■□□ 2.22
CCDC107-203ENST00000378407 CHADLQ6NUI6 762 aa28.92■■■□□ 2.22
CCDC107-203ENST00000378407 LARGE2Q8N3Y3 721 aa28.92■■■□□ 2.22
CCDC107-203ENST00000378407 KLRG1Q96E93 195 aa28.92■■■□□ 2.22
CCDC107-203ENST00000378407 L3MBTL3Q96JM7 780 aaPredicted RBP28.92■■■□□ 2.22
CCDC107-203ENST00000378407 SNED1Q8TER0 1413 aa28.92■■■□□ 2.22
CCDC107-203ENST00000378407 ELL2O00472 640 aaPredicted RBP28.91■■■□□ 2.22
CCDC107-203ENST00000378407 ZNF853P0CG23 659 aa28.91■■■□□ 2.22
CCDC107-203ENST00000378407 EIF6P56537 245 aaKnown RBP28.91■■■□□ 2.22
CCDC107-203ENST00000378407 GOLGA2Q08379 1002 aa28.91■■■□□ 2.22
CCDC107-203ENST00000378407 DDX46Q7L014 1031 aaKnown RBP28.91■■■□□ 2.22
CCDC107-203ENST00000378407 EAPPQ56P03 285 aaPredicted RBP28.9■■■□□ 2.22
CCDC107-203ENST00000378407 ATP5J2-PTCD1G3V325 749 aa28.89■■■□□ 2.22
CCDC107-203ENST00000378407 FZD9O00144 591 aa28.89■■■□□ 2.22
CCDC107-203ENST00000378407 TAF1DQ9H5J8 278 aaPredicted RBP28.89■■■□□ 2.22
CCDC107-203ENST00000378407 HACL1Q9UJ83 578 aa28.89■■■□□ 2.22
CCDC107-203ENST00000378407 ATP6V0A2Q9Y487 856 aa28.89■■■□□ 2.22
CCDC107-203ENST00000378407 SLC51AQ86UW1 340 aa28.88■■■□□ 2.21
CCDC107-203ENST00000378407 GJA3Q9Y6H8 435 aa28.88■■■□□ 2.21
CCDC107-203ENST00000378407 PPIP5K2O43314 1243 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 POTEIP0CG38 1075 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 POTEJP0CG39 1038 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 RIC3Q7Z5B4 369 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 LDHDQ86WU2 507 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 NIM1KQ8IY84 436 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 GPC2Q8N158 579 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 SCN4AP35499 1836 aa28.87■■■□□ 2.21
CCDC107-203ENST00000378407 ANP32CO43423 234 aa28.86■■■□□ 2.21
CCDC107-203ENST00000378407 CCDC184Q52MB2 194 aa28.86■■■□□ 2.21
CCDC107-203ENST00000378407 CHMP4AQ9BY43 222 aa28.86■■■□□ 2.21
CCDC107-203ENST00000378407 BBOX1O75936 387 aa28.85■■■□□ 2.21
CCDC107-203ENST00000378407 DPP8Q6V1X1 898 aaPredicted RBP28.85■■■□□ 2.21
CCDC107-203ENST00000378407 SUPT20HQ8NEM7 779 aa28.85■■■□□ 2.21
CCDC107-203ENST00000378407 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
CCDC107-203ENST00000378407 MRS2Q9HD23 443 aa28.85■■■□□ 2.21
CCDC107-203ENST00000378407 CLEC11AQ9Y240 323 aa28.85■■■□□ 2.21
CCDC107-203ENST00000378407 LAMB2P55268 1798 aa28.85■■■□□ 2.21
CCDC107-203ENST00000378407 LMOD1P29536 600 aaPredicted RBP28.84■■■□□ 2.21
CCDC107-203ENST00000378407 EPHX2P34913 555 aa28.84■■■□□ 2.21
CCDC107-203ENST00000378407 GRAPQ13588 217 aa28.84■■■□□ 2.21
CCDC107-203ENST00000378407 GRAPLQ8TC17 118 aaPredicted RBP28.84■■■□□ 2.21
CCDC107-203ENST00000378407 FAM89AQ96GI7 184 aa28.84■■■□□ 2.21
CCDC107-203ENST00000378407 ZNF316A6NFI3 1004 aaPredicted RBP28.83■■■□□ 2.21
CCDC107-203ENST00000378407 AOC3Q16853 763 aa28.83■■■□□ 2.21
CCDC107-203ENST00000378407 RTL5Q5HYW3 569 aaPredicted RBP28.83■■■□□ 2.21
CCDC107-203ENST00000378407 CCDC30Q5VVM6 783 aa28.82■■■□□ 2.2
CCDC107-203ENST00000378407 C8orf58Q8NAV2 365 aa28.82■■■□□ 2.2
CCDC107-203ENST00000378407 COL4A5P29400 1685 aa28.82■■■□□ 2.2
CCDC107-203ENST00000378407 PNMA8AQ86V59 439 aaPredicted RBP28.81■■■□□ 2.2
CCDC107-203ENST00000378407 SP8Q8IXZ3 490 aa28.81■■■□□ 2.2
CCDC107-203ENST00000378407 MPNDQ8N594 471 aa28.81■■■□□ 2.2
CCDC107-203ENST00000378407 PHAXQ9H814 394 aaKnown RBP28.81■■■□□ 2.2
CCDC107-203ENST00000378407 DDX58O95786 925 aaKnown RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms