RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 ANKRD36CQ5JPF3 1778 aa28.1■■■□□ 2.09
GFRA3-202ENST00000378362 FLIIQ13045 1269 aa28.09■■■□□ 2.09
GFRA3-202ENST00000378362 PPP1R42Q7Z4L9 355 aa28.09■■■□□ 2.09
GFRA3-202ENST00000378362 CHMP4AQ9BY43 222 aa28.09■■■□□ 2.09
GFRA3-202ENST00000378362 TRMT112Q9UI30 125 aaKnown RBP28.09■■■□□ 2.09
GFRA3-202ENST00000378362 PARP10Q53GL7 1025 aa28.08■■■□□ 2.09
GFRA3-202ENST00000378362 TRMT2AQ8IZ69 625 aaKnown RBP28.08■■■□□ 2.09
GFRA3-202ENST00000378362 ISCA1Q9BUE6 129 aa28.08■■■□□ 2.09
GFRA3-202ENST00000378362 BCL2L13Q9BXK5 485 aa28.08■■■□□ 2.09
GFRA3-202ENST00000378362 HCLS1P14317 486 aaPredicted RBP28.08■■■□□ 2.09
GFRA3-202ENST00000378362 ADCY9O60503 1353 aa28.08■■■□□ 2.09
GFRA3-202ENST00000378362 SRGNP10124 158 aa28.07■■■□□ 2.08
GFRA3-202ENST00000378362 FKBP5Q13451 457 aaPredicted RBP28.07■■■□□ 2.08
GFRA3-202ENST00000378362 FAM89AQ96GI7 184 aa28.07■■■□□ 2.08
GFRA3-202ENST00000378362 TNRC6CQ9HCJ0 1690 aaKnown RBP28.07■■■□□ 2.08
GFRA3-202ENST00000378362 GRIN3BO60391 1043 aa28.06■■■□□ 2.08
GFRA3-202ENST00000378362 DDX58O95786 925 aaKnown RBP28.06■■■□□ 2.08
GFRA3-202ENST00000378362 KSR2Q6VAB6 950 aa28.06■■■□□ 2.08
GFRA3-202ENST00000378362 TTLL6Q8N841 843 aa28.06■■■□□ 2.08
GFRA3-202ENST00000378362 F6X3S4 739 aa28.05■■■□□ 2.08
GFRA3-202ENST00000378362 ARHGAP27Q6ZUM4 889 aa28.05■■■□□ 2.08
GFRA3-202ENST00000378362 METTL22Q9BUU2 404 aaPredicted RBP28.05■■■□□ 2.08
GFRA3-202ENST00000378362 CACNA1SQ13698 1873 aa28.05■■■□□ 2.08
GFRA3-202ENST00000378362 CWF19L2Q2TBE0 894 aaKnown RBP28.03■■■□□ 2.08
GFRA3-202ENST00000378362 CACNA1FO60840 1977 aa28.03■■■□□ 2.08
GFRA3-202ENST00000378362 IGKV5-2P06315 115 aa28.02■■■□□ 2.08
GFRA3-202ENST00000378362 SLC51AQ86UW1 340 aa28.02■■■□□ 2.08
GFRA3-202ENST00000378362 SSH1Q8WYL5 1049 aa28.02■■■□□ 2.08
GFRA3-202ENST00000378362 MASTLQ96GX5 879 aa28.02■■■□□ 2.08
GFRA3-202ENST00000378362 DLEC1Q9Y238 1755 aa28.02■■■□□ 2.08
GFRA3-202ENST00000378362 SLX4Q8IY92 1834 aa28.02■■■□□ 2.08
GFRA3-202ENST00000378362 CHD4Q14839 1912 aa28.01■■■□□ 2.07
GFRA3-202ENST00000378362 KLRG2A4D1S0 409 aaPredicted RBP28.01■■■□□ 2.07
GFRA3-202ENST00000378362 C21orf2O43822 256 aa28.01■■■□□ 2.07
GFRA3-202ENST00000378362 YY1P25490 414 aa28.01■■■□□ 2.07
GFRA3-202ENST00000378362 OLFM4Q6UX06 510 aa28.01■■■□□ 2.07
GFRA3-202ENST00000378362 SH3TC1Q8TE82 1336 aa28■■■□□ 2.07
GFRA3-202ENST00000378362 IBTKQ9P2D0 1353 aaPredicted RBP27.99■■■□□ 2.07
GFRA3-202ENST00000378362 PRPF40BQ6NWY9 871 aaKnown RBP27.99■■■□□ 2.07
GFRA3-202ENST00000378362 MRPL50Q8N5N7 158 aaKnown RBP27.99■■■□□ 2.07
GFRA3-202ENST00000378362 NPR1P16066 1061 aa27.98■■■□□ 2.07
GFRA3-202ENST00000378362 TRIM28Q13263 835 aaKnown RBP27.97■■■□□ 2.07
GFRA3-202ENST00000378362 STYK1Q6J9G0 422 aa27.97■■■□□ 2.07
GFRA3-202ENST00000378362 DNAAF4Q8WXU2 420 aa27.97■■■□□ 2.07
GFRA3-202ENST00000378362 NLRP3Q96P20 1036 aa27.97■■■□□ 2.07
GFRA3-202ENST00000378362 ARFGEF1Q9Y6D6 1849 aa27.97■■■□□ 2.07
GFRA3-202ENST00000378362 CRY2Q49AN0 593 aa27.97■■■□□ 2.07
GFRA3-202ENST00000378362 SLC10A5Q5PT55 438 aa27.97■■■□□ 2.07
GFRA3-202ENST00000378362 CWC25Q9NXE8 425 aaPredicted RBP27.97■■■□□ 2.07
GFRA3-202ENST00000378362 RPGRQ92834 1020 aaKnown RBP27.96■■■□□ 2.07
GFRA3-202ENST00000378362 RASSF7Q02833 373 aa27.95■■■□□ 2.07
GFRA3-202ENST00000378362 NEXNQ0ZGT2 675 aa27.95■■■□□ 2.07
GFRA3-202ENST00000378362 CCDC191Q8NCU4 936 aa27.95■■■□□ 2.07
GFRA3-202ENST00000378362 CNKSR1Q969H4 720 aa27.95■■■□□ 2.07
GFRA3-202ENST00000378362 PDZRN3Q9UPQ7 1066 aa27.95■■■□□ 2.07
GFRA3-202ENST00000378362 TAF1P21675 1872 aa27.95■■■□□ 2.06
GFRA3-202ENST00000378362 NEURL1BA8MQ27 555 aa27.95■■■□□ 2.06
GFRA3-202ENST00000378362 IRS4O14654 1257 aaPredicted RBP27.95■■■□□ 2.06
GFRA3-202ENST00000378362 SLC4A10Q6U841 1118 aa27.94■■■□□ 2.06
GFRA3-202ENST00000378362 SMC4Q9NTJ3 1288 aa27.94■■■□□ 2.06
GFRA3-202ENST00000378362 ZBTB38Q8NAP3 1195 aaPredicted RBP27.93■■■□□ 2.06
GFRA3-202ENST00000378362 CCDC85AQ96PX6 553 aaPredicted RBP27.93■■■□□ 2.06
GFRA3-202ENST00000378362 LAMB2P55268 1798 aa27.92■■■□□ 2.06
GFRA3-202ENST00000378362 ZBED9Q6R2W3 1325 aa27.92■■■□□ 2.06
GFRA3-202ENST00000378362 DDX60Q8IY21 1712 aaKnown RBP27.92■■■□□ 2.06
GFRA3-202ENST00000378362 PRELPP51888 382 aa27.9■■■□□ 2.06
GFRA3-202ENST00000378362 RNF123Q5XPI4 1314 aa27.9■■■□□ 2.06
GFRA3-202ENST00000378362 PCCAP05165 728 aaPredicted RBP27.89■■■□□ 2.06
GFRA3-202ENST00000378362 UBE3BQ7Z3V4 1068 aa27.89■■■□□ 2.06
GFRA3-202ENST00000378362 C7orf43Q8WVR3 580 aa27.89■■■□□ 2.06
GFRA3-202ENST00000378362 RBM17Q96I25 401 aaKnown RBP27.89■■■□□ 2.06
GFRA3-202ENST00000378362 NFKBIEO00221 500 aa27.88■■■□□ 2.05
GFRA3-202ENST00000378362 ALDH1B1P30837 517 aa27.88■■■□□ 2.05
GFRA3-202ENST00000378362 HOXA10P31260 410 aaPredicted RBP27.88■■■□□ 2.05
GFRA3-202ENST00000378362 GCKRQ14397 625 aa27.88■■■□□ 2.05
GFRA3-202ENST00000378362 BEND3Q5T5X7 828 aa27.88■■■□□ 2.05
GFRA3-202ENST00000378362 RARSP54136 660 aaKnown RBP27.88■■■□□ 2.05
GFRA3-202ENST00000378362 RIC1Q4ADV7 1423 aa27.87■■■□□ 2.05
GFRA3-202ENST00000378362 ABCC4O15439 1325 aa27.87■■■□□ 2.05
GFRA3-202ENST00000378362 LINS1Q8NG48 757 aa27.87■■■□□ 2.05
GFRA3-202ENST00000378362 ALDH1L2Q3SY69 923 aa27.86■■■□□ 2.05
GFRA3-202ENST00000378362 NOB1Q9ULX3 412 aaKnown RBP27.86■■■□□ 2.05
GFRA3-202ENST00000378362 BCAR3O75815 825 aa27.85■■■□□ 2.05
GFRA3-202ENST00000378362 C9orf131Q5VYM1 1079 aa27.85■■■□□ 2.05
GFRA3-202ENST00000378362 COL4A1P02462 1669 aa27.85■■■□□ 2.05
GFRA3-202ENST00000378362 CCDC88AQ3V6T2 1871 aa27.85■■■□□ 2.05
GFRA3-202ENST00000378362 SEC31BQ9NQW1 1179 aa27.85■■■□□ 2.05
GFRA3-202ENST00000378362 DDX46Q7L014 1031 aaKnown RBP27.84■■■□□ 2.05
GFRA3-202ENST00000378362 ZNF526Q8TF50 670 aaPredicted RBP27.84■■■□□ 2.05
GFRA3-202ENST00000378362 YTHDC1Q96MU7 727 aaKnown RBP27.84■■■□□ 2.05
GFRA3-202ENST00000378362 CRAMP1Q96RY5 1269 aa27.84■■■□□ 2.05
GFRA3-202ENST00000378362 SBF1O95248 1867 aa27.84■■■□□ 2.05
GFRA3-202ENST00000378362 RNF181Q9P0P0 153 aa27.83■■■□□ 2.05
GFRA3-202ENST00000378362 H7C1W4 665 aa27.83■■■□□ 2.05
GFRA3-202ENST00000378362 PPEF1O14829 653 aaPredicted RBP27.83■■■□□ 2.05
GFRA3-202ENST00000378362 CELF1Q92879 486 aaKnown RBP27.83■■■□□ 2.05
GFRA3-202ENST00000378362 CT47B1P0C2W7 299 aaPredicted RBP27.82■■■□□ 2.04
GFRA3-202ENST00000378362 PDE8AO60658 829 aa27.81■■■□□ 2.04
GFRA3-202ENST00000378362 SF3B3Q15393 1217 aaKnown RBP27.81■■■□□ 2.04
GFRA3-202ENST00000378362 FER1L6Q2WGJ9 1857 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms