RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 PNMA8AQ86V59 439 aaPredicted RBP20.2■□□□□ 0.82
CLCN6-207ENST00000376497 ZNF34Q8IZ26 560 aa20.2■□□□□ 0.82
CLCN6-207ENST00000376497 GPC2Q8N158 579 aa20.2■□□□□ 0.82
CLCN6-207ENST00000376497 GPTP24298 496 aa20.19■□□□□ 0.82
CLCN6-207ENST00000376497 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
CLCN6-207ENST00000376497 GRIPAP1Q4V328 841 aa20.19■□□□□ 0.82
CLCN6-207ENST00000376497 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
CLCN6-207ENST00000376497 GIGYF2Q6Y7W6 1299 aaKnown RBP20.19■□□□□ 0.82
CLCN6-207ENST00000376497 JDP2Q8WYK2 163 aa20.19■□□□□ 0.82
CLCN6-207ENST00000376497 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
CLCN6-207ENST00000376497 ZBTB3Q9H5J0 574 aa20.19■□□□□ 0.82
CLCN6-207ENST00000376497 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
CLCN6-207ENST00000376497 TMEM88BA6NKF7 163 aa20.18■□□□□ 0.82
CLCN6-207ENST00000376497 CRAMP1Q96RY5 1269 aa20.18■□□□□ 0.82
CLCN6-207ENST00000376497 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
CLCN6-207ENST00000376497 COL4A5P29400 1685 aa20.17■□□□□ 0.82
CLCN6-207ENST00000376497 NTSR2O95665 410 aa20.17■□□□□ 0.82
CLCN6-207ENST00000376497 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
CLCN6-207ENST00000376497 CLEC11AQ9Y240 323 aa20.17■□□□□ 0.82
CLCN6-207ENST00000376497 LRP10Q7Z4F1 713 aa20.16■□□□□ 0.82
CLCN6-207ENST00000376497 PPP1R42Q7Z4L9 355 aa20.16■□□□□ 0.82
CLCN6-207ENST00000376497 CAPN15O75808 1086 aa20.15■□□□□ 0.82
CLCN6-207ENST00000376497 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
CLCN6-207ENST00000376497 PDIA6Q15084 440 aa20.15■□□□□ 0.82
CLCN6-207ENST00000376497 PARP10Q53GL7 1025 aa20.15■□□□□ 0.82
CLCN6-207ENST00000376497 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
CLCN6-207ENST00000376497 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
CLCN6-207ENST00000376497 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
CLCN6-207ENST00000376497 LTBP1Q14766 1721 aa20.15■□□□□ 0.82
CLCN6-207ENST00000376497 VEGFBP49765 207 aa20.14■□□□□ 0.81
CLCN6-207ENST00000376497 ANKRD36CQ5JPF3 1778 aa20.13■□□□□ 0.81
CLCN6-207ENST00000376497 PPEF1O14829 653 aaPredicted RBP20.13■□□□□ 0.81
CLCN6-207ENST00000376497 RIPK4P57078 832 aa20.13■□□□□ 0.81
CLCN6-207ENST00000376497 SLC10A5Q5PT55 438 aa20.13■□□□□ 0.81
CLCN6-207ENST00000376497 MAP1SQ66K74 1059 aaPredicted RBP20.13■□□□□ 0.81
CLCN6-207ENST00000376497 C3orf67Q6ZVT6 689 aa20.13■□□□□ 0.81
CLCN6-207ENST00000376497 NLRP3Q96P20 1036 aa20.13■□□□□ 0.81
CLCN6-207ENST00000376497 FOXN1O15353 648 aa20.12■□□□□ 0.81
CLCN6-207ENST00000376497 LARGE2Q8N3Y3 721 aa20.12■□□□□ 0.81
CLCN6-207ENST00000376497 GJA3Q9Y6H8 435 aa20.12■□□□□ 0.81
CLCN6-207ENST00000376497 LAMB2P55268 1798 aa20.12■□□□□ 0.81
CLCN6-207ENST00000376497 RASSF10A6NK89 507 aa20.11■□□□□ 0.81
CLCN6-207ENST00000376497 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
CLCN6-207ENST00000376497 UTP14AQ9BVJ6 771 aaKnown RBP20.11■□□□□ 0.81
CLCN6-207ENST00000376497 VPS33BQ9H267 617 aa20.11■□□□□ 0.81
CLCN6-207ENST00000376497 LMOD1P29536 600 aaPredicted RBP20.1■□□□□ 0.81
CLCN6-207ENST00000376497 SCNN1DP51172 638 aa20.1■□□□□ 0.81
CLCN6-207ENST00000376497 SLC51AQ86UW1 340 aa20.1■□□□□ 0.81
CLCN6-207ENST00000376497 PRDM10Q9NQV6 1147 aa20.1■□□□□ 0.81
CLCN6-207ENST00000376497 TRPM7Q96QT4 1865 aa20.09■□□□□ 0.81
CLCN6-207ENST00000376497 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
CLCN6-207ENST00000376497 TMPOP42166 694 aaKnown RBP20.09■□□□□ 0.81
CLCN6-207ENST00000376497 RALBP1Q15311 655 aa20.09■□□□□ 0.81
CLCN6-207ENST00000376497 PROSER3Q2NL68 480 aa20.09■□□□□ 0.81
CLCN6-207ENST00000376497 DEFB115Q30KQ5 88 aa20.09■□□□□ 0.81
CLCN6-207ENST00000376497 ATP6V0A2Q9Y487 856 aa20.09■□□□□ 0.81
CLCN6-207ENST00000376497 ANXA1P04083 346 aa20.08■□□□□ 0.81
CLCN6-207ENST00000376497 EPS15P42566 896 aa20.08■□□□□ 0.81
CLCN6-207ENST00000376497 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
CLCN6-207ENST00000376497 NIM1KQ8IY84 436 aa20.08■□□□□ 0.81
CLCN6-207ENST00000376497 TMX4Q9H1E5 349 aaPredicted RBP20.08■□□□□ 0.81
CLCN6-207ENST00000376497 WBP1LQ9NX94 342 aa20.08■□□□□ 0.81
CLCN6-207ENST00000376497 CTCFP49711 727 aaPredicted RBP20.07■□□□□ 0.8
CLCN6-207ENST00000376497 HSP90AB3PQ58FF7 597 aa20.07■□□□□ 0.8
CLCN6-207ENST00000376497 USP50Q70EL3 339 aaPredicted RBP20.07■□□□□ 0.8
CLCN6-207ENST00000376497 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLCN6-207ENST00000376497 ABCC4O15439 1325 aa20.06■□□□□ 0.8
CLCN6-207ENST00000376497 PPIP5K2O43314 1243 aa20.06■□□□□ 0.8
CLCN6-207ENST00000376497 COPS6Q7L5N1 327 aa20.06■□□□□ 0.8
CLCN6-207ENST00000376497 SUPT20HQ8NEM7 779 aa20.06■□□□□ 0.8
CLCN6-207ENST00000376497 AIDAQ96BJ3 306 aa20.06■□□□□ 0.8
CLCN6-207ENST00000376497 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
CLCN6-207ENST00000376497 BBOX1O75936 387 aa20.05■□□□□ 0.8
CLCN6-207ENST00000376497 AOC3Q16853 763 aa20.05■□□□□ 0.8
CLCN6-207ENST00000376497 NLRP10Q86W26 655 aa20.05■□□□□ 0.8
CLCN6-207ENST00000376497 SP8Q8IXZ3 490 aa20.05■□□□□ 0.8
CLCN6-207ENST00000376497 TAF1P21675 1872 aa20.05■□□□□ 0.8
CLCN6-207ENST00000376497 WDR33Q9C0J8 1336 aaKnown RBP20.04■□□□□ 0.8
CLCN6-207ENST00000376497 TCIRG1Q13488 830 aa20.04■□□□□ 0.8
CLCN6-207ENST00000376497 XAGE3Q8WTP9 111 aa20.04■□□□□ 0.8
CLCN6-207ENST00000376497 CHL1O00533 1208 aa20.03■□□□□ 0.8
CLCN6-207ENST00000376497 AIMP1Q12904 312 aaKnown RBP20.03■□□□□ 0.8
CLCN6-207ENST00000376497 GPRC5DQ9NZD1 345 aa20.03■□□□□ 0.8
CLCN6-207ENST00000376497 ZNRF3Q9ULT6 936 aa20.03■□□□□ 0.8
CLCN6-207ENST00000376497 ABT1Q9ULW3 272 aaKnown RBP20.03■□□□□ 0.8
CLCN6-207ENST00000376497 CXCL9Q07325 125 aa20.02■□□□□ 0.8
CLCN6-207ENST00000376497 NECTIN2Q92692 538 aa20.02■□□□□ 0.8
CLCN6-207ENST00000376497 ADARB2Q9NS39 739 aaKnown RBP20.02■□□□□ 0.8
CLCN6-207ENST00000376497 THSD7BQ9C0I4 1608 aa20.02■□□□□ 0.79
CLCN6-207ENST00000376497 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.79
CLCN6-207ENST00000376497 HCLS1P14317 486 aaPredicted RBP20.01■□□□□ 0.79
CLCN6-207ENST00000376497 MAP2K1Q02750 393 aaPredicted RBP20.01■□□□□ 0.79
CLCN6-207ENST00000376497 FMR1Q06787 632 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLCN6-207ENST00000376497 DPP8Q6V1X1 898 aaPredicted RBP20.01■□□□□ 0.79
CLCN6-207ENST00000376497 MPNDQ8N594 471 aa20.01■□□□□ 0.79
CLCN6-207ENST00000376497 TRMT112Q9UI30 125 aaKnown RBP20.01■□□□□ 0.79
CLCN6-207ENST00000376497 DDX60Q8IY21 1712 aaKnown RBP20.01■□□□□ 0.79
CLCN6-207ENST00000376497 LBX1P52954 281 aa20■□□□□ 0.79
CLCN6-207ENST00000376497 KIAA2012Q0VF49 1180 aa20■□□□□ 0.79
CLCN6-207ENST00000376497 GRAPQ13588 217 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms