RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TCHHQ07283 1943 aa20.62■□□□□ 0.89
LDLRAP1-201ENST00000374338 POLA2Q14181 598 aa20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 AACSQ86V21 672 aa20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 BICC1Q9H694 974 aaKnown RBP20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 ATP5J2-PTCD1G3V325 749 aa20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 NCBP1Q09161 790 aaKnown RBP20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 KIF1BPQ96EK5 621 aa20.61■□□□□ 0.89
LDLRAP1-201ENST00000374338 UVSSAQ2YD98 709 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 USP48Q86UV5 1035 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 MCCP23508 829 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 PTH1RQ03431 593 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 TERF2Q15554 542 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 STAP2Q9UGK3 403 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 DDX41Q9UJV9 622 aaKnown RBP20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 HSPA2P54652 639 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 KIAA1524Q8TCG1 905 aa20.6■□□□□ 0.89
LDLRAP1-201ENST00000374338 CAPN2P17655 700 aa20.59■□□□□ 0.89
LDLRAP1-201ENST00000374338 KAZALD1Q96I82 304 aa20.59■□□□□ 0.89
LDLRAP1-201ENST00000374338 BOLA2Q9H3K6 86 aa20.59■□□□□ 0.89
LDLRAP1-201ENST00000374338 PYCARDQ9ULZ3 195 aa20.59■□□□□ 0.89
LDLRAP1-201ENST00000374338 RAPGEF4Q8WZA2 1011 aa20.59■□□□□ 0.89
LDLRAP1-201ENST00000374338 BRD1O95696 1058 aa20.58■□□□□ 0.89
LDLRAP1-201ENST00000374338 EPHA10Q5JZY3 1008 aa20.58■□□□□ 0.89
LDLRAP1-201ENST00000374338 COPS6Q7L5N1 327 aa20.58■□□□□ 0.89
LDLRAP1-201ENST00000374338 NFAT5O94916 1531 aa20.58■□□□□ 0.89
LDLRAP1-201ENST00000374338 ADCK5Q3MIX3 580 aa20.58■□□□□ 0.88
LDLRAP1-201ENST00000374338 ZNF496Q96IT1 587 aaPredicted RBP20.58■□□□□ 0.88
LDLRAP1-201ENST00000374338 FAM227BQ96M60 508 aa20.58■□□□□ 0.88
LDLRAP1-201ENST00000374338 MYD88Q99836 296 aa20.58■□□□□ 0.88
LDLRAP1-201ENST00000374338 TULP2O00295 520 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 IFIT2P09913 472 aaKnown RBP20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 FAM184AQ8NB25 1140 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 XAGE3Q8WTP9 111 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 AP5Z1O43299 807 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 ADGRL3Q9HAR2 1447 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 LARGE1O95461 756 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 NAA30Q147X3 362 aaPredicted RBP20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 CLASRPQ8N2M8 674 aaKnown RBP20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 SYAP1Q96A49 352 aaPredicted RBP20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 SNX14Q9Y5W7 946 aa20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 MORC2Q9Y6X9 1032 aaPredicted RBP20.57■□□□□ 0.88
LDLRAP1-201ENST00000374338 IGKV5-2P06315 115 aa20.56■□□□□ 0.88
LDLRAP1-201ENST00000374338 IRX3P78415 501 aaPredicted RBP20.56■□□□□ 0.88
LDLRAP1-201ENST00000374338 AMOTQ4VCS5 1084 aa20.56■□□□□ 0.88
LDLRAP1-201ENST00000374338 EAF2Q96CJ1 260 aaPredicted RBP20.56■□□□□ 0.88
LDLRAP1-201ENST00000374338 CASTP20810 708 aaKnown RBP20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 PDIA6Q15084 440 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 CNTROBQ8N137 903 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 ZFP91Q96JP5 570 aaPredicted RBP20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 SGSM2O43147 1006 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 SASH1O94885 1247 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 ZNF790Q6PG37 636 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 CNPY2Q9Y2B0 182 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 TAF6LQ9Y6J9 622 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 LRRC37A3O60309 1634 aa20.55■□□□□ 0.88
LDLRAP1-201ENST00000374338 ERBB3P21860 1342 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 AK2P54819 239 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 RAB11FIP3O75154 756 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 CERS3Q8IU89 383 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 GRM8O00222 908 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 SLFNL1Q499Z3 407 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 KCNF1Q9H3M0 494 aa20.54■□□□□ 0.88
LDLRAP1-201ENST00000374338 NPHP4O75161 1426 aaPredicted RBP20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 HSPA4P34932 840 aa20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 LSG1Q9H089 658 aaKnown RBP20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 CHMP3Q9Y3E7 222 aa20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 PHF14O94880 888 aa20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 SYCP1Q15431 976 aa20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 NECAB1Q8N987 351 aa20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 CHD2O14647 1828 aaKnown RBP20.53■□□□□ 0.88
LDLRAP1-201ENST00000374338 BABAM1Q9NWV8 329 aa20.52■□□□□ 0.88
LDLRAP1-201ENST00000374338 CALCOCO1Q9P1Z2 691 aa20.52■□□□□ 0.88
LDLRAP1-201ENST00000374338 ATF3P18847 181 aa20.52■□□□□ 0.88
LDLRAP1-201ENST00000374338 TRIM34Q9BYJ4 488 aa20.52■□□□□ 0.88
LDLRAP1-201ENST00000374338 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
LDLRAP1-201ENST00000374338 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
LDLRAP1-201ENST00000374338 KIF18AQ8NI77 898 aa20.51■□□□□ 0.87
LDLRAP1-201ENST00000374338 ERICH4A6NGS2 130 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 FIBPO43427 364 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 PPFIA3O75145 1194 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 G3BP1Q13283 466 aaKnown RBP eCLIP20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 RUFY3Q7L099 469 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 UBE3BQ7Z3V4 1068 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 CYP27B1O15528 508 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 ECHDC1Q9NTX5 307 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 RGPD5Q99666 1765 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 TEX2Q8IWB9 1127 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 RGS22Q8NE09 1264 aa20.5■□□□□ 0.87
LDLRAP1-201ENST00000374338 KDM4AO75164 1064 aa20.49■□□□□ 0.87
LDLRAP1-201ENST00000374338 CCDC85AQ96PX6 553 aaPredicted RBP20.49■□□□□ 0.87
LDLRAP1-201ENST00000374338 C19orf44Q9H6X5 657 aa20.49■□□□□ 0.87
LDLRAP1-201ENST00000374338 SLC52A2Q9HAB3 445 aa20.49■□□□□ 0.87
LDLRAP1-201ENST00000374338 DDX21Q9NR30 783 aaKnown RBP eCLIP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms