RNA–Protein interactions for RNA: ENST00000373493.9

RBBP4-202, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBBP4, Length 7,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-202ENST00000373493 SAMD9LQ8IVG5 1584 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 NOM1Q5C9Z4 860 aaKnown RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 HDAC9Q9UKV0 1011 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 NCAPD2Q15021 1401 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 PRPF40AO75400 957 aaKnown RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 CATIPQ7Z7H3 387 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 GPR108Q9NPR9 543 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 ESPNB1AK53 854 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 EIF3JO75822 258 aaKnown RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 NBPF7P0C2Y1 421 aaPredicted RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 IL13P35225 146 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 ZC3H6P61129 1189 aaKnown RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 CT47A1Q5JQC4 288 aaPredicted RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 UPF3BQ9BZI7 483 aaKnown RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 RPGRQ92834 1020 aaKnown RBP8.6□□□□□ -1.03
RBBP4-202ENST00000373493 CABP5Q9NP86 173 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 ZNF213O14771 459 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 CCDC172P0C7W6 258 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 A2ML1A8K2U0 1454 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 TUBBP07437 444 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 PPP4R3AQ6IN85 833 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 C1orf115Q9H7X2 142 aa8.6□□□□□ -1.03
RBBP4-202ENST00000373493 ME1P48163 572 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 PLBD2Q8NHP8 589 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 VAMP4O75379 141 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 ZNF804AQ7Z570 1209 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 SUPT20HQ8NEM7 779 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 NGLY1Q96IV0 654 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 SLC12A7Q9Y666 1083 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 ESR2Q92731 530 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 PHF23Q9BUL5 403 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 GOLGA8AA7E2F4 631 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 GOLGA8BA8MQT2 603 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 FKBP15Q5T1M5 1219 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 CCDC194A0A1B0GVG4 234 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 RNMTO43148 476 aaKnown RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 PDE6BP35913 854 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 DZIP1Q86YF9 867 aaKnown RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 CCDC191Q8NCU4 936 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 KCNG4Q8TDN1 519 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 KCNG1Q9UIX4 513 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 LRRFIP2Q9Y608 721 aaKnown RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 SSRP1Q08945 709 aaKnown RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 PRPF40BQ6NWY9 871 aaKnown RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 BRAPQ7Z569 592 aa8.59□□□□□ -1.03
RBBP4-202ENST00000373493 ZNF397Q8NF99 534 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-202ENST00000373493 C8orf76Q96K31 380 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 PLEKHG2Q9H7P9 1386 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 GCC2Q8IWJ2 1684 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 FOXO3O43524 673 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 GCP02774 474 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 CALML3P27482 149 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 BRPF3Q9ULD4 1205 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 GRM8O00222 908 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 RNF113AO15541 343 aaKnown RBP8.58□□□□□ -1.04
RBBP4-202ENST00000373493 CCDC150Q8NCX0 1101 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 CTAGE1Q96RT6 745 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 CETN1Q12798 172 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
RBBP4-202ENST00000373493 PDE1AP54750 535 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 ATP2B3Q16720 1220 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 ODF2Q5BJF6 829 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 NPHP4O75161 1426 aaPredicted RBP8.58□□□□□ -1.04
RBBP4-202ENST00000373493 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
RBBP4-202ENST00000373493 IKQ13123 557 aaPredicted RBP8.58□□□□□ -1.04
RBBP4-202ENST00000373493 TPTE2Q6XPS3 522 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 NEK1Q96PY6 1258 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 RBM28Q9NW13 759 aaKnown RBP8.58□□□□□ -1.04
RBBP4-202ENST00000373493 MED14O60244 1454 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 ERVK-7P63135 1459 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 DDB1Q16531 1140 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 JAKMIP3Q5VZ66 844 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 RNF214Q8ND24 703 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 MAP3K2Q9Y2U5 619 aa8.58□□□□□ -1.04
RBBP4-202ENST00000373493 TULP1O00294 542 aaPredicted RBP8.57□□□□□ -1.04
RBBP4-202ENST00000373493 IDH1O75874 414 aaKnown RBP8.57□□□□□ -1.04
RBBP4-202ENST00000373493 ZSCAN30Q86W11 494 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 ZNF444Q8N0Y2 327 aaPredicted RBP8.57□□□□□ -1.04
RBBP4-202ENST00000373493 DENND2AQ9ULE3 1009 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 TM6SF1Q9BZW5 370 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 USP5P45974 858 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 LLPHQ9BRT6 129 aaKnown RBP8.57□□□□□ -1.04
RBBP4-202ENST00000373493 ZBTB40Q9NUA8 1239 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 CPSF1Q10570 1443 aaKnown RBP8.57□□□□□ -1.04
RBBP4-202ENST00000373493 FIBPO43427 364 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 NLRP3Q96P20 1036 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 MAP3K19Q56UN5 1328 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 CCDC112Q8NEF3 446 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 CCDC66A2RUB6 948 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
RBBP4-202ENST00000373493 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
RBBP4-202ENST00000373493 LDHAL6AQ6ZMR3 332 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 LZTS2Q9BRK4 669 aa8.57□□□□□ -1.04
RBBP4-202ENST00000373493 AGLP35573 1532 aa8.56□□□□□ -1.04
RBBP4-202ENST00000373493 SERPINC1P01008 464 aa8.56□□□□□ -1.04
RBBP4-202ENST00000373493 PCP11498 1178 aaKnown RBP8.56□□□□□ -1.04
RBBP4-202ENST00000373493 TNNT3P45378 269 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms