RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 CCDC138Q96M89 665 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 NACAP1Q9BZK3 213 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 HDAC9Q9UKV0 1011 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 FYB2Q5VWT5 728 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 HEATR3Q7Z4Q2 680 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 PCK1P35558 622 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 CNTROBQ8N137 903 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 ANKFY1Q9P2R3 1169 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 WDR33Q9C0J8 1336 aaKnown RBP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 UTP14CQ5TAP6 766 aaKnown RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 PFDN4Q9NQP4 134 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 GOLGA8QA0A0J9YX86 632 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 GOLGA8OA6NCC3 632 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 GOLGA8NF8WBI6 632 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 YEATS4O95619 227 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC171Q6TFL3 1326 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 KIF6Q6ZMV9 814 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 PLCD3Q8N3E9 789 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 CTCFLQ8NI51 663 aaPredicted RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 DTNBO60941 627 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 FAM186BQ8IYM0 893 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 AKAP2Q9Y2D5 859 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 MYBBP1AQ9BQG0 1328 aaKnown RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 HSPA8P11142 646 aaKnown RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 CDR2Q01850 454 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 PODNQ7Z5L7 613 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 NLRP13Q86W25 1043 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 SRRTQ9BXP5 876 aaKnown RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 XAB2Q9HCS7 855 aaKnown RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 RBM26Q5T8P6 1007 aaKnown RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 MAATS1Q7Z4T9 603 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC117Q8IWD4 279 aaPredicted RBP9.91□□□□□ -0.82
VANGL1-204ENST00000369510 LRRC43Q8N309 656 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 PTPRGP23470 1445 aa9.91□□□□□ -0.82
VANGL1-204ENST00000369510 KHDRBS2Q5VWX1 349 aaKnown RBP9.9□□□□□ -0.82
VANGL1-204ENST00000369510 CEP57Q86XR8 500 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 UPF3BQ9BZI7 483 aaKnown RBP9.9□□□□□ -0.82
VANGL1-204ENST00000369510 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 MUM1L1Q5H9M0 696 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC129Q6ZRS4 1044 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 MAK16Q9BXY0 300 aaKnown RBP9.9□□□□□ -0.82
VANGL1-204ENST00000369510 ST20-MTHFSA0A0A6YYL1 179 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 ELL2O00472 640 aaPredicted RBP9.9□□□□□ -0.82
VANGL1-204ENST00000369510 LRRC27Q9C0I9 530 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 NUTM2FA1L443 756 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 PSME1Q06323 249 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 ANKRD45Q5TZF3 282 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 ZKSCAN2Q63HK3 967 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 KRT222Q8N1A0 295 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 API5Q9BZZ5 524 aaKnown RBP9.9□□□□□ -0.82
VANGL1-204ENST00000369510 KIF15Q9NS87 1388 aa9.9□□□□□ -0.82
VANGL1-204ENST00000369510 CRCPO75575 148 aa9.9□□□□□ -0.83
VANGL1-204ENST00000369510 C16orf72Q14CZ0 275 aa9.9□□□□□ -0.83
VANGL1-204ENST00000369510 TMEM57Q8N5G2 664 aa9.9□□□□□ -0.83
VANGL1-204ENST00000369510 GBP5Q96PP8 586 aa9.9□□□□□ -0.83
VANGL1-204ENST00000369510 WIZO95785 1651 aa9.9□□□□□ -0.83
VANGL1-204ENST00000369510 SDCCAG3Q96C92 435 aa9.9□□□□□ -0.83
VANGL1-204ENST00000369510 ZBED9Q6R2W3 1325 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 GOLGA6CA6NDK9 693 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 GOLGA6BA6NDN3 693 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 KRT8P05787 483 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 GOLGA6DP0CG33 693 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 CLUL1Q15846 466 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 ZSCAN25Q6NSZ9 544 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 GOLGA6AQ9NYA3 693 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 ZFXP17010 805 aaPredicted RBP9.89□□□□□ -0.83
VANGL1-204ENST00000369510 TRAK1Q9UPV9 953 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 FLOT2Q14254 428 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 CCDC62Q6P9F0 684 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 ATF3P18847 181 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 CYB5RLQ6IPT4 315 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 SRCIN1Q9C0H9 1055 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 SLC38A10Q9HBR0 1119 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 CCDC102BQ68D86 513 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 ATP6V1E2Q96A05 226 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 NRBF2Q96F24 287 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 SKILP12757 684 aa9.89□□□□□ -0.83
VANGL1-204ENST00000369510 RRBP1Q9P2E9 1410 aaKnown RBP9.89□□□□□ -0.83
VANGL1-204ENST00000369510 FHOD3Q2V2M9 1422 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 CCDC92Q53HC0 331 aaPredicted RBP9.88□□□□□ -0.83
VANGL1-204ENST00000369510 PATL1Q86TB9 770 aaKnown RBP9.88□□□□□ -0.83
VANGL1-204ENST00000369510 KRT3P12035 628 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 INTS8Q75QN2 995 aaKnown RBP9.88□□□□□ -0.83
VANGL1-204ENST00000369510 ERCC3P19447 782 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 RILPL1Q5EBL4 403 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 PALM2Q8IXS6 379 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 TEKT2Q9UIF3 430 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 SMIM24O75264 130 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 TRIM8Q9BZR9 551 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 PLCB1Q9NQ66 1216 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 LRCH2Q5VUJ6 765 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.88□□□□□ -0.83
VANGL1-204ENST00000369510 HOXC8P31273 242 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 PHLDB3Q6NSJ2 640 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 PRIMPOLQ96LW4 560 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 CSRNP2Q9H175 543 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 SERPINA10Q9UK55 444 aa9.88□□□□□ -0.83
VANGL1-204ENST00000369510 GTF2F1P35269 517 aaKnown RBP eCLIP9.87□□□□□ -0.83
VANGL1-204ENST00000369510 MCM10Q7L590 875 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms