RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PRPF4BQ13523 1007 aaKnown RBP18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 IFI16Q16666 785 aaKnown RBP18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 FSIP1Q8NA03 581 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 NCOA7Q8NI08 942 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 URI1O94763 535 aaPredicted RBP18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 KIF18AQ8NI77 898 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 IKBKGQ9Y6K9 419 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 SPECC1Q5M775 1068 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 POTEB2H3BUK9 544 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 USP16Q9Y5T5 823 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 TSPY3P0CV98 308 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 TSPY8P0CW00 308 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 MCM4P33991 863 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 EXOC1Q9NV70 894 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 NOP2P46087 812 aaKnown RBP18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 MICALCLQ6ZW33 695 aa18.04■□□□□ 0.48
NUCKS1-201ENST00000367142 OGFOD1Q8N543 542 aa18.03■□□□□ 0.48
NUCKS1-201ENST00000367142 HLTFQ14527 1009 aaKnown RBP eCLIP18.03■□□□□ 0.482e-15■□□□□ 9.2
NUCKS1-201ENST00000367142 RMND1Q9NWS8 449 aa18.03■□□□□ 0.48
NUCKS1-201ENST00000367142 CCDC144CPQ8IYA2 1237 aa18.03■□□□□ 0.48
NUCKS1-201ENST00000367142 NBPF8Q3BBV2 869 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 DDX19AQ9NUU7 478 aaKnown RBP18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 F6X3S4 739 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 PHACTR2O75167 634 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 GIMAP7Q8NHV1 300 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 ECHDC1Q9NTX5 307 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 CCDC175P0C221 793 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 NCBP1Q09161 790 aaKnown RBP18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 SLC4A8Q2Y0W8 1093 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 PLCD3Q8N3E9 789 aa18.02■□□□□ 0.48
NUCKS1-201ENST00000367142 PPP1R14CQ8TAE6 165 aa18.02■□□□□ 0.47
NUCKS1-201ENST00000367142 NCAPD3P42695 1498 aa18.02■□□□□ 0.47
NUCKS1-201ENST00000367142 PLVAPQ9BX97 442 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 SLC26A6Q9BXS9 759 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 KRT13P13646 458 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 CD109Q6YHK3 1445 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 NBPF7P0C2Y1 421 aaPredicted RBP18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 STX1AQ16623 288 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 TTC12Q9H892 705 aaPredicted RBP18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 KRT23Q9C075 422 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 MMRN2Q9H8L6 949 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 NEMFO60524 1076 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 POLD1P28340 1107 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
NUCKS1-201ENST00000367142 FLIIQ13045 1269 aa18■□□□□ 0.47
NUCKS1-201ENST00000367142 GSDMDP57764 484 aa18■□□□□ 0.47
NUCKS1-201ENST00000367142 PIK3R4Q99570 1358 aa18■□□□□ 0.47
NUCKS1-201ENST00000367142 MICU3Q86XE3 530 aa18■□□□□ 0.47
NUCKS1-201ENST00000367142 DDX23Q9BUQ8 820 aaKnown RBP18■□□□□ 0.47
NUCKS1-201ENST00000367142 HMG20BQ9P0W2 317 aa18■□□□□ 0.47
NUCKS1-201ENST00000367142 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 ZNF804AQ7Z570 1209 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 WDR70Q9NW82 654 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 C6orf163Q5TEZ5 329 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 SNRKQ9NRH2 765 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 KIF4AO95239 1232 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 BRPF3Q9ULD4 1205 aa17.99■□□□□ 0.47
NUCKS1-201ENST00000367142 CAMSAP2Q08AD1 1489 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 GOLGA6L9A6NEM1 432 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 WTAPQ15007 396 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 EHBP1Q8NDI1 1231 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 ERICH4A6NGS2 130 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 STX8Q9UNK0 236 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 BMP15O95972 392 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 RAB3IL1Q8TBN0 382 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 KIAA0753Q2KHM9 967 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 SMARCC1Q92922 1105 aaPredicted RBP17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 IMPG2Q9BZV3 1241 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
NUCKS1-201ENST00000367142 GJB2P29033 226 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 SPECC1LQ69YQ0 1117 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 NEK1Q96PY6 1258 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 MSH6P52701 1360 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 OTUD6BQ8N6M0 293 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 RNF187Q5TA31 235 aaPredicted RBP17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 CCDC102BQ68D86 513 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 UBE3BQ7Z3V4 1068 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 ARL1P40616 181 aaPredicted RBP17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 HAND2P61296 217 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 TMC6Q7Z403 805 aa17.97■□□□□ 0.47
NUCKS1-201ENST00000367142 GNAQP50148 359 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 MAATS1Q7Z4T9 603 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 CNNM2Q9H8M5 875 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 SUPT6HQ7KZ85 1726 aaKnown RBP17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 TOM1O60784 492 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms