RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 RASGRP4Q8TDF6 673 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 KCNB2Q92953 911 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 CNKSR1Q969H4 720 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 L3MBTL2Q969R5 705 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 SEC16BQ96JE7 1060 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 GGNBP2Q9H3C7 697 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 METTL14Q9HCE5 456 aaKnown RBP5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ARHGEF10LQ9HCE6 1279 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 RAB6BQ9NRW1 208 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 PGPEP1Q9NXJ5 209 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 CABP1Q9NZU7 370 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 KLK14Q9P0G3 267 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 HRH3Q9Y5N1 445 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 V9GY48 417 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 XRCC5P13010 732 aaKnown RBP5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ADD1P35611 737 aaKnown RBP5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 SKOR1P84550 965 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NR5A1Q13285 461 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 XKR5Q6UX68 686 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NOL8Q76FK4 1167 aaKnown RBP5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ERMP1Q7Z2K6 904 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 JAZF1Q86VZ6 243 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 CCDC74AQ96AQ1 378 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 OSBPL7Q9BZF2 842 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 PHACTR1Q9C0D0 580 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 USP3Q9Y6I4 520 aa5.29□□□□□ -1.56
RNU6-1249P-201ENST00000363237 K7ELQ4 463 aaPredicted RBP5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 RAB11FIP3O75154 756 aa5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 SSBP05455 408 aaKnown RBP eCLIP5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 SH3PXD2AQ5TCZ1 1133 aa5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 Q6ZNB5 142 aa5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NKX2-3Q8TAU0 364 aa5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ZDHHC1Q8WTX9 485 aa5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 GPATCH3Q96I76 525 aa5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NEUROD4Q9HD90 331 aa5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 DMGDHQ9UI17 866 aaKnown RBP5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 FNDC3AQ9Y2H6 1198 aaKnown RBP5.28□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ENPP3O14638 875 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ADH1CP00326 375 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 USP17L7P0C7H9 530 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ANAPC15P60006 121 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 CENPCQ03188 943 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 CLN3Q13286 438 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 SERINC3Q13530 473 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 MEI1Q5TIA1 1274 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 PPARGC1BQ86YN6 1023 aaKnown RBP5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 MICAL1Q8TDZ2 1067 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 SNX29Q8TEQ0 813 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 RSRP1Q9BUV0 290 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 NIFKQ9BYG3 293 aaKnown RBP5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 TMX1Q9H3N1 280 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ZFYVE28Q9HCC9 887 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 SIRPGQ9P1W8 387 aa5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 NOP58Q9Y2X3 529 aaKnown RBP5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 MRPL42Q9Y6G3 142 aaKnown RBP5.27□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ARID4BQ4LE39 1312 aaPredicted RBP5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 A6NHS1 94 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 POTECB2RU33 542 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 MICAL2O94851 1124 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ADH1AP07327 375 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 GTF2E1P29083 439 aaPredicted RBP5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 RPIAP49247 311 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 NFX1Q12986 1120 aaKnown RBP5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 PWP1Q13610 501 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ZNF295-AS1Q8N0V1 137 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 EPS8L3Q8TE67 593 aaKnown RBP5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 SPON2Q9BUD6 331 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 NOC4LQ9BVI4 516 aaKnown RBP5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 FHDC1Q9C0D6 1143 aaPredicted RBP5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 STRIP2Q9ULQ0 834 aa5.26□□□□□ -1.57
RNU6-1249P-201ENST00000363237 PPEF1O14829 653 aaPredicted RBP5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 RC3H1Q5TC82 1133 aaKnown RBP5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 PDE12Q6L8Q7 609 aaKnown RBP5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 PI16Q6UXB8 463 aa5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 RELL1Q8IUW5 271 aa5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 KIAA0825Q8IV33 1275 aa5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ANKLE1Q8NAG6 615 aa5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 KCTD12Q96CX2 325 aaKnown RBP5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 NLRP3Q96P20 1036 aa5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ZSCAN10Q96SZ4 725 aaPredicted RBP5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 PPP4R2Q9NY27 417 aa5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 PARP3Q9Y6F1 533 aa5.25□□□□□ -1.57
RNU6-1249P-201ENST00000363237 TGFBR3LH3BV60 316 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 U2SURPO15042 1029 aaKnown RBP5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 SIAH2O43255 324 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 CD2BP2O95400 341 aaKnown RBP5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 COL9A2Q14055 689 aaPredicted RBP5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 IER5Q5VY09 327 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 USPL1Q5W0Q7 1092 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 TMEM214Q6NUQ4 689 aaKnown RBP5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 NBPF10Q6P3W6 841 aaKnown RBP5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 LRP10Q7Z4F1 713 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ZNF438Q7Z4V0 828 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 RHBDD1Q8TEB9 315 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 SRPK1Q96SB4 655 aaKnown RBP5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 BCO2Q9BYV7 579 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 ZNF408Q9H9D4 720 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 COPRSQ9NQ92 184 aa5.24□□□□□ -1.57
RNU6-1249P-201ENST00000363237 KBTBD4Q9NVX7 518 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms