RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 USP16Q9Y5T5 823 aa18.51■□□□□ 0.55
CLSTN1-201ENST00000361311 GOLGA6L10A6NI86 522 aa18.5■□□□□ 0.55
CLSTN1-201ENST00000361311 IDI1Q13907 227 aa18.5■□□□□ 0.55
CLSTN1-201ENST00000361311 IFNKQ9P0W0 207 aa18.5■□□□□ 0.55
CLSTN1-201ENST00000361311 MYL6BP14649 208 aa18.5■□□□□ 0.55
CLSTN1-201ENST00000361311 IMMTQ16891 758 aaKnown RBP18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 ZSCAN25Q6NSZ9 544 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 KIAA1328Q86T90 577 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 LRRC2Q9BYS8 371 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 TBC1D2BQ9UPU7 963 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 PI4KAP2A4QPH2 592 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 TTC39AQ5SRH9 613 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 PI4KAP1Q8N8J0 262 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 GIMAP7Q8NHV1 300 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 RAI14Q9P0K7 980 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 SNX14Q9Y5W7 946 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 CD109Q6YHK3 1445 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 MCM3P25205 808 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 TXLNAP40222 546 aa18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 NSFL1CQ9UNZ2 370 aaKnown RBP18.49■□□□□ 0.55
CLSTN1-201ENST00000361311 KRBA2Q6ZNG9 492 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 RUFY3Q7L099 469 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 ZNF215Q9UL58 517 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 PALD1Q9ULE6 856 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 KIAA1524Q8TCG1 905 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 IPO4Q8TEX9 1081 aaKnown RBP18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 CLSTN2Q9H4D0 955 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 A0A1W2PP64 1363 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 PIK3R4Q99570 1358 aa18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-201ENST00000361311 CREB3L3Q68CJ9 461 aa18.47■□□□□ 0.55
CLSTN1-201ENST00000361311 EVCP57679 992 aa18.47■□□□□ 0.55
CLSTN1-201ENST00000361311 MNAT1P51948 309 aa18.47■□□□□ 0.55
CLSTN1-201ENST00000361311 GOLGA1Q92805 767 aa18.47■□□□□ 0.55
CLSTN1-201ENST00000361311 ORC3Q9UBD5 711 aaPredicted RBP18.47■□□□□ 0.55
CLSTN1-201ENST00000361311 SOS1Q07889 1333 aaPredicted RBP18.47■□□□□ 0.55
CLSTN1-201ENST00000361311 PTPRTO14522 1441 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 ABCC4O15439 1325 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 CTR9Q6PD62 1173 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 WASLO00401 505 aaPredicted RBP18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 HSP90AA4PQ58FG1 418 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 LIG1P18858 919 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 ZBTB9Q96C00 473 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 VPS18Q9P253 973 aa18.46■□□□□ 0.55
CLSTN1-201ENST00000361311 GOLGA8BA8MQT2 603 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 SGSM2O43147 1006 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 SYKP43405 635 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 LARP1Q6PKG0 1096 aaKnown RBP18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 HSPA4P34932 840 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 KCNG4Q8TDN1 519 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 RAD50Q92878 1312 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 STIM1Q13586 685 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 CCDC102BQ68D86 513 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 ATF3P18847 181 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 Q6ZUG5 572 aa18.45■□□□□ 0.54
CLSTN1-201ENST00000361311 KIAA0556O60303 1618 aa18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 IBSPP21815 317 aaPredicted RBP18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 EIF5P55010 431 aaKnown RBP18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 NLRP2Q9NX02 1062 aa18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 NMIQ13287 307 aaPredicted RBP18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 G2E3Q7L622 706 aa18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
CLSTN1-201ENST00000361311 LEO1Q8WVC0 666 aaPredicted RBP18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 CEP126Q9P2H0 1117 aa18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 TTC41PQ6P2S7 1318 aa18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 TTC31Q49AM3 519 aaPredicted RBP18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 NUP133Q8WUM0 1156 aa18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 PHACTR2O75167 634 aa18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 ANXA1P04083 346 aa18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 CARD6Q9BX69 1037 aa18.43■□□□□ 0.54
CLSTN1-201ENST00000361311 HSP90AB2PQ58FF8 381 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 ODF2Q5BJF6 829 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 CTAGE15A4D2H0 777 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 CTAGE8P0CG41 777 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 CTAGE6Q86UF2 777 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 CTAGE4Q8IX94 777 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 WASF1Q92558 559 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 NUP88Q99567 741 aaPredicted RBP18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 TRAPPC8Q9Y2L5 1435 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 ERCC6LQ2NKX8 1250 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 CLEC17AQ6ZS10 378 aa18.42■□□□□ 0.54
CLSTN1-201ENST00000361311 TTC21BQ7Z4L5 1316 aa18.41■□□□□ 0.54
CLSTN1-201ENST00000361311 FAM160A1Q05DH4 1040 aa18.41■□□□□ 0.54
CLSTN1-201ENST00000361311 CDC37L1Q7L3B6 337 aa18.41■□□□□ 0.54
CLSTN1-201ENST00000361311 CEP131Q9UPN4 1083 aa18.41■□□□□ 0.54
CLSTN1-201ENST00000361311 CUL4AQ13619 759 aa18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 ZRANB1Q9UGI0 708 aa18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 SYTL4Q96C24 671 aaPredicted RBP18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 KARSQ15046 597 aaKnown RBP18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 RAB11FIP4Q86YS3 637 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms