RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
PRDM2-203ENST00000343137 CRACR2AQ9BSW2 395 aa9.75□□□□□ -0.85
PRDM2-203ENST00000343137 TRPM2O94759 1503 aa9.75□□□□□ -0.85
PRDM2-203ENST00000343137 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
PRDM2-203ENST00000343137 BMP15O95972 392 aa9.75□□□□□ -0.85
PRDM2-203ENST00000343137 SNRPA1P09661 255 aaKnown RBP9.75□□□□□ -0.85
PRDM2-203ENST00000343137 TSG101Q99816 390 aa9.75□□□□□ -0.85
PRDM2-203ENST00000343137 USP16Q9Y5T5 823 aa9.75□□□□□ -0.85
PRDM2-203ENST00000343137 GOLGA6L7A0A1B0GV03 622 aa9.75□□□□□ -0.85
PRDM2-203ENST00000343137 C16orf45Q96MC5 204 aaPredicted RBP9.75□□□□□ -0.85
PRDM2-203ENST00000343137 RBM8AQ9Y5S9 174 aaKnown RBP9.75□□□□□ -0.85
PRDM2-203ENST00000343137 AKAP4Q5JQC9 854 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 JAKMIP3Q5VZ66 844 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 TMC6Q7Z403 805 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 ORC3Q9UBD5 711 aaPredicted RBP9.74□□□□□ -0.85
PRDM2-203ENST00000343137 PATL2C9JE40 543 aaKnown RBP9.74□□□□□ -0.85
PRDM2-203ENST00000343137 IARSP41252 1262 aaKnown RBP9.74□□□□□ -0.85
PRDM2-203ENST00000343137 BMS1Q14692 1282 aaKnown RBP9.74□□□□□ -0.85
PRDM2-203ENST00000343137 CCDC102BQ68D86 513 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 ATL3Q6DD88 541 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 KSR2Q6VAB6 950 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 RAB34Q9BZG1 259 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 KDM5DQ9BY66 1539 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 KIF20AO95235 890 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 UQCRFS1P1P0C7P4 283 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 KIF4BQ2VIQ3 1234 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 TFIP11Q9UBB9 837 aaKnown RBP9.74□□□□□ -0.85
PRDM2-203ENST00000343137 KDM5CP41229 1560 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 ATP7AQ04656 1500 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 YTHDC2Q9H6S0 1430 aaKnown RBP9.74□□□□□ -0.85
PRDM2-203ENST00000343137 IFIT3O14879 490 aaKnown RBP9.74□□□□□ -0.85
PRDM2-203ENST00000343137 ANKRD24Q8TF21 1146 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 FAM107BQ9H098 131 aa9.74□□□□□ -0.85
PRDM2-203ENST00000343137 USO1O60763 962 aaKnown RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 SEC63Q9UGP8 760 aaKnown RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 GOLIM4O00461 696 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 CALRP27797 417 aaKnown RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 CBX1P83916 185 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 CATIPQ7Z7H3 387 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 EDC4Q6P2E9 1401 aaKnown RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 MAP3K5Q99683 1374 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 GRM8O00222 908 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 CCT2P78371 535 aaKnown RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 GIMAP6Q6P9H5 292 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 METAP2P50579 478 aaKnown RBP eCLIP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 GUCY1B3Q02153 619 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 ZFYVE27Q5T4F4 411 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 AEBP2Q6ZN18 517 aaPredicted RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 FAM114A1Q8IWE2 563 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 SRRTQ9BXP5 876 aaKnown RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 MRPS27Q92552 414 aaKnown RBP9.73□□□□□ -0.85
PRDM2-203ENST00000343137 TNNQ9UQP3 1299 aa9.73□□□□□ -0.85
PRDM2-203ENST00000343137 PPP1R12BO60237 982 aaPredicted RBP9.72□□□□□ -0.85
PRDM2-203ENST00000343137 CHMLP26374 656 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 SYNMO15061 1565 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 SEC24BO95487 1268 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
PRDM2-203ENST00000343137 TUBB4BP68371 445 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 ANO6Q4KMQ2 910 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 ANKRD13DQ6ZTN6 518 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 STK11IPQ8N1F8 1099 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 CCDC12Q8WUD4 166 aaPredicted RBP9.72□□□□□ -0.85
PRDM2-203ENST00000343137 CHPF2Q9P2E5 772 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 SHTN1A0MZ66 631 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 TSHZ3Q63HK5 1081 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 CTAGE1Q96RT6 745 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 PANK2Q9BZ23 570 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 NPHP3Q7Z494 1330 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 RMND1Q9NWS8 449 aa9.72□□□□□ -0.85
PRDM2-203ENST00000343137 KIF5BP33176 963 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 AMPD3Q01432 767 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 TMEM266Q2M3C6 531 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 KRT23Q9C075 422 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 CNNM2Q9H8M5 875 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 LINS1Q8NG48 757 aa9.71□□□□□ -0.85
PRDM2-203ENST00000343137 IL15P40933 162 aaPredicted RBP9.71□□□□□ -0.86
PRDM2-203ENST00000343137 ZHX3Q9H4I2 956 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 SPINK5Q9NQ38 1064 aaPredicted RBP9.71□□□□□ -0.86
PRDM2-203ENST00000343137 ABCF2Q9UG63 623 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 MAGI3Q5TCQ9 1506 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 MSH6P52701 1360 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 SYKP43405 635 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 VPS36Q86VN1 386 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 ANKRD18AQ8IVF6 992 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 C16orf71Q8IYS4 520 aaPredicted RBP9.71□□□□□ -0.86
PRDM2-203ENST00000343137 BRF1Q92994 677 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 NUP88Q99567 741 aaPredicted RBP9.71□□□□□ -0.86
PRDM2-203ENST00000343137 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.86
PRDM2-203ENST00000343137 PTPRTO14522 1441 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 MINDY4BA8MYZ0 360 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 ZNF445P59923 1031 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 MTHFSDQ2M296 383 aaKnown RBP9.71□□□□□ -0.86
PRDM2-203ENST00000343137 TSPYL6Q8N831 410 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms