RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TBCAO75347 108 aaKnown RBP13.51□□□□□ -0.25
SHANK2-201ENST00000338508 MPHOSPH6Q99547 160 aaKnown RBP13.51□□□□□ -0.25
SHANK2-201ENST00000338508 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-201ENST00000338508 PTGS1P23219 599 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 UBA7P41226 1012 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 MICALCLQ6ZW33 695 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 CALM1P0DP23 149 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 CALM2P0DP24 149 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 CALM3P0DP25 149 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 KRT13P13646 458 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 CCDC183Q5T5S1 534 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 TPD52P55327 224 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-201ENST00000338508 SREK1Q8WXA9 508 aaKnown RBP13.5□□□□□ -0.25
SHANK2-201ENST00000338508 EXOC1Q9NV70 894 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
SHANK2-201ENST00000338508 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
SHANK2-201ENST00000338508 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 CCDC50Q8IVM0 306 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 LRRC45Q96CN5 670 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 TRIM47Q96LD4 638 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 MCM4P33991 863 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 USP25Q9UHP3 1055 aa13.49□□□□□ -0.25
SHANK2-201ENST00000338508 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 WAPLQ7Z5K2 1190 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 RNF41Q9H4P4 317 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-201ENST00000338508 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 PDE4BQ07343 736 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 MAP7D1Q3KQU3 841 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 MYOM3Q5VTT5 1437 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 TSPY3P0CV98 308 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 TSPY8P0CW00 308 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 BAG3O95817 575 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 SKAP1Q86WV1 359 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 ESPNB1AK53 854 aa13.48□□□□□ -0.25
SHANK2-201ENST00000338508 HSF2BPO75031 334 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 PLCB3Q01970 1234 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 LDHAL6AQ6ZMR3 332 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 KIF5BP33176 963 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 ST5P78524 1137 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 TTF1Q15361 905 aaPredicted RBP13.47□□□□□ -0.25
SHANK2-201ENST00000338508 SMC1BQ8NDV3 1235 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 METAP2P50579 478 aaKnown RBP eCLIP13.47□□□□□ -0.25
SHANK2-201ENST00000338508 DAAM2Q86T65 1068 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 CCDC155Q8N6L0 562 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 EXOC5O00471 708 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 GJB2P29033 226 aa13.47□□□□□ -0.25
SHANK2-201ENST00000338508 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
SHANK2-201ENST00000338508 CCDC12Q8WUD4 166 aaPredicted RBP13.46□□□□□ -0.25
SHANK2-201ENST00000338508 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
SHANK2-201ENST00000338508 RFX1P22670 979 aa13.46□□□□□ -0.25
SHANK2-201ENST00000338508 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.25
SHANK2-201ENST00000338508 ZBTB16Q05516 673 aa13.46□□□□□ -0.25
SHANK2-201ENST00000338508 HAUS7Q99871 368 aa13.46□□□□□ -0.25
SHANK2-201ENST00000338508 FOXO3O43524 673 aa13.46□□□□□ -0.26
SHANK2-201ENST00000338508 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.26
SHANK2-201ENST00000338508 CGNQ9P2M7 1197 aaKnown RBP13.46□□□□□ -0.26
SHANK2-201ENST00000338508 SLU7O95391 586 aaKnown RBP13.46□□□□□ -0.26
SHANK2-201ENST00000338508 NAP1L3Q99457 506 aaPredicted RBP13.46□□□□□ -0.26
SHANK2-201ENST00000338508 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 RASA3Q14644 834 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-201ENST00000338508 PFDN4Q9NQP4 134 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
SHANK2-201ENST00000338508 STAT6P42226 847 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 SNX16P57768 344 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 FAM114A1Q8IWE2 563 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 TTC36A6NLP5 189 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 SELENOSQ9BQE4 189 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 KIF4AO95239 1232 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 RAPGEF3O95398 923 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 PPP2R5CQ13362 524 aa13.45□□□□□ -0.26
SHANK2-201ENST00000338508 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
SHANK2-201ENST00000338508 GEN1Q17RS7 908 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 N4BP3O15049 544 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 SNW1Q13573 536 aaKnown RBP13.44□□□□□ -0.26
SHANK2-201ENST00000338508 NBPF6Q5VWK0 638 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-201ENST00000338508 CCDC65Q8IXS2 484 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 NBPF4Q96M43 638 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 SCAND2PQ9GZW5 306 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-201ENST00000338508 RRAGBQ5VZM2 374 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 CCDC25Q86WR0 208 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 JAG2Q9Y219 1238 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 HMGB1P09429 215 aaKnown RBP13.44□□□□□ -0.26
SHANK2-201ENST00000338508 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
SHANK2-201ENST00000338508 NCBP1Q09161 790 aaKnown RBP13.44□□□□□ -0.26
SHANK2-201ENST00000338508 CDC5LQ99459 802 aaKnown RBP13.44□□□□□ -0.26
SHANK2-201ENST00000338508 AKR1B10O60218 316 aa13.44□□□□□ -0.26
SHANK2-201ENST00000338508 IFIT1BQ5T764 474 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms